BAC Information

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BAC

Clone NameB6Ng01-018L18
Chromosome10 (Build37)3 (Build37)
Map Location 104,054,014 - 104,054,36362,469,153 - 62,470,238
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018L18.bB6Ng01-018L18.g
ACCDH852051DH852052
length9861,073
definitionDH852051|Mus musculus domesticus DNA, BAC clone: B6Ng01-018L18, 5' end.DH852052|Mus musculus domesticus DNA, BAC clone: B6Ng01-018L18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,054,014 - 104,054,363)(62,469,153 - 62,470,238)
sequence
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaaacaaaacaaccctggagt
tccacctcacaccagtcagaatggctaagatcaaaaattcaagtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctct
gaaaattggacatagtattactggaggaacccgtaaaacctctcctgggc
atatatccagaagatgttccaaccggtaagaaggacacatgctccactat
gtgtcgagtccgctcttgaccagcaagaacgacaagaccaccagtccttc
taacagcagtttattcagttctaattcttcttgtttatatctcccttgtt
tatatctcccccgagccctgggcctctcactcttttatactctcagttcc
catccacgcacagcaggccacgccacctcaccaggcatgcagcttcagct
aatcagggcagcaggggcatatctccatcaaaatggattcactggtatcc
tggtacacctgcgcagctctcaagatgtttgtggcttatatgaggaagtc
aggtgcaagtcatacgacttagctgcagtccctggcacctttgggactgc
cgccacactcgctcctaacaactatgttcatagcagccttatttataata
gccagaagctggaaagaacccagatgtccctcaatagaggaatggataca
caatggagtactactcagctattaaaaagaatgaatttatgaaattccta
ggcaaatggatggtcctggagggcatcatcctgagtgaggtaacccaatc
acaaaagaactcacatgatatgtactcactgattagtgaatattagccca
gaaactagaatacccaagatacagatacatttgcaa
gaattcatgctatcaactgatcttggcattgtttggcattgtgggacaat
gcaagaaagacacgattttgtcctcctggagcacacttctgaagagacaa
acaaaacaaaacaaaacaaaacaaaacaaaacaaaaaccaaaaaacaaaa
caaaccacagcaaaagtggtagtggagagtgtttgtgagaaacttggctc
ggtttagaagcattttcacagcctaaattaaaatttcatgtgttgataaa
atgctatacaagaaatagtgctgtgtatgagccacgaggagtcagtagta
aatgccagtgaatttatatgaaaatgatggatttaattggcatgtatttt
cattctttggttctatagtaaggatgaggtaggttcacaaatggtctatc
caggagctttgtggcatacaaagcagcacttttctgatgagggaagctcc
tgggctgtcagatggcattcaaaggttggttgtgtcttgttggggttcag
gtttggtaaacatggaggtatgaattgccttctttctttttcagtacaga
tttgttcagaatccagtgtagatacggtgcatgtaggcatgcggaaacag
tttctgcttgtcatgtctgtcattgctttaaaactctccctaagttgaca
ttattcatagcaccctgtttccagatcattgcatagatttgtgttggcag
accagaacttctgattttccagttgaatgtttccttagtctgttttcttt
ggtactaatacagtactaaatttgttatgttttgaagaataaagtattct
attatatagctaattttcaataagtagtgatggacttgttactggcagat
actacagaaagcattatgtatcatatggacacaggaagcatgggaaagca
ttaagattcgcttttatagcagccccccctctgggataaacactaactca
ttattcatttgtgtgatcatcatttatgaagaaaagccattgattatctt
caaatgttctacctctattatgggattatgagattaattccaacatggat
tttaaggccatgaaagaatctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104054014_104054363
seq2: B6Ng01-018L18.b_43_392 (reverse)

seq1  ATAGTGGAGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCTGGATATAT  50
      ||||||||||||||||||||||||||||||||  ||||||||||||||||
seq2  ATAGTGGAGCATGTGTCCTTCTTACCGGTTGGAACATCTTCTGGATATAT  50

seq1  GCCCAGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTC  100
      |||||| |||||| || | || |||||| ||| |||||||||||||||||
seq2  GCCCAGGAGAGGTTTTACGGGTTCCTCCAGTAATACTATGTCCAATTTTC  100

seq1  TGACGAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAATCC  150
       || |||| ||||||| |||||||||||||||||||||||| ||||||||
seq2  AGAGGAACTGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCC  150

seq1  CACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCT  200
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTTGCCAGCATCT  200

seq1  GCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGA  250
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCACTTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGA  250

seq1  ATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAA  300
      |   ||||||||||||| ||||||||||||||||||||||||||| ||||
seq2  ACTCCAGGGTTGTTTTGTTTTGCATTTCCCTGATGATTAAGGATGCTGAA  300

seq1  CATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTC  350
      |||||||||||||||||||| ||||||| |||||||||||||||||||||
seq2  CATTTTTTCAGGTGCTTCTCAGCCATTCAGTATTCCTCAGGTGAGAATTC  350

seq1: chr3_62469153_62470238
seq2: B6Ng01-018L18.g_70_1142

seq1  GAATTCATGCTATCAACTGATCTTGGCATTGTTTGGCATTGTGGGACAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGCTATCAACTGATCTTGGCATTGTTTGGCATTGTGGGACAAT  50

seq1  GCAAGAAAGACACGATTTTGTCCTCCTGGAGCACACTTCTGAAGAGACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAAAGACACGATTTTGTCCTCCTGGAGCACACTTCTGAAGAGACAA  100

seq1  ACAAAACAAAACAAAACAAAACAAAACAAAACAAAAACCAAAAAACAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAACAAAACAAAACAAAACAAAACAAAAACCAAAAAACAAAA  150

seq1  CAAACCACAGCAAAAGTGGTAGTGGAGAGTGTTTGTGAGAAACTTGGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCACAGCAAAAGTGGTAGTGGAGAGTGTTTGTGAGAAACTTGGCTC  200

seq1  GGTTTAGAAGCATTTTCACAGCCTAAATTAAAATTTCATGTGTTGATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAGAAGCATTTTCACAGCCTAAATTAAAATTTCATGTGTTGATAAA  250

seq1  ATGCTATACAAGAAATAGTGCTGTGTATGAGCCACGAGGAGTCAGTAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATACAAGAAATAGTGCTGTGTATGAGCCACGAGGAGTCAGTAGTA  300

seq1  AATGCCAGTGAATTTATATGAAAATGATGGATTTAATTGGCATGTATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCAGTGAATTTATATGAAAATGATGGATTTAATTGGCATGTATTTT  350

seq1  CATTCTTTGGTTCTATAGTAAGGATGAGGTAGGTTCACAAATGGTCTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTTGGTTCTATAGTAAGGATGAGGTAGGTTCACAAATGGTCTATC  400

seq1  CAGGAGCTTTGTGGCATACAAAGCAGCACTTTTCTGATGAGGGAAGCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCTTTGTGGCATACAAAGCAGCACTTTTCTGATGAGGGAAGCTCC  450

seq1  TGGGCTGTCAGATGGCATTCAAAGGTTGGTTGTGTCTTGTTGGGGTTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTGTCAGATGGCATTCAAAGGTTGGTTGTGTCTTGTTGGGGTTCAG  500

seq1  GTTTGGTAAACATGGAGGTATGAATTGCCTTCTTTCTTTTTCAGTACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTAAACATGGAGGTATGAATTGCCTTCTTTCTTTTTCAGTACAGA  550

seq1  TTTGTTCAGAATCCAGTGTAGATACGGTGCATGTAGGCATGCGGAAACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCAGAATCCAGTGTAGATACGGTGCATGTAGGCATGCGGAAACAG  600

seq1  TTTCTGCTTGTCATGTCTGTCATTGCTTTAAAACTCTCCCTAAGTTGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCTTGTCATGTCTGTCATTGCTTTAAAACTCTCCCTAAGTTGACA  650

seq1  TTATTCATAGCACCCTGTTTCCAGATCATTGCATAGATTTGTGTTGGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCATAGCACCCTGTTTCCAGATCATTGCATAGATTTGTGTTGGCAG  700

seq1  ACCAGAACTTCTGATTTTCCAGTTGAATGTTTCCTTAGTCTGTTTTCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAACTTCTGATTTTCCAGTTGAATGTTTCCTTAGTCTGTTTTCTTT  750

seq1  GGTACTAATACAGTACTAAA-TTGTTATGTTTTGAAGAATAAAGTATTCT  799
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GGTACTAATACAGTACTAAATTTGTTATGTTTTGAAGAATAAAGTATTCT  800

seq1  ATTATATAGCTAATTTTCAATAAGTAGTGATGGACTTGTTACTGGCAGAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATAGCTAATTTTCAATAAGTAGTGATGGACTTGTTACTGGCAGAT  850

seq1  ACTACAGAAAGCATTATGTATCATATGGACACAGGAAGCATGGGAAAAGC  899
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACTACAGAAAGCATTATGTATCATATGGACACAGGAAGCATGGG-AAAGC  899

seq1  ATTAAGATTCGCTTTTATAGCAGCCCCCCCTCTTGGGATAAAACACTAAC  949
      |||||||||||||||||||||||||||||||| |||||| ||||||||||
seq2  ATTAAGATTCGCTTTTATAGCAGCCCCCCCTC-TGGGAT-AAACACTAAC  947

seq1  TCATTATTCATTTGTGTGATTCATCCATTTATGAAGAAAAAGCCCATGAT  999
      ||||||||||||||||||| |||| ||||||||||| |||||||  ||||
seq2  TCATTATTCATTTGTGTGA-TCAT-CATTTATGAAG-AAAAGCCATTGAT  994

seq1  TATCTTCTATAGGTCCTACCTCTTAATAATGGGTATTATGAGGATTAAAT  1049
      ||||||| | | || ||||||||  || ||||| ||||||| |||| |||
seq2  TATCTTC-AAATGTTCTACCTCT--ATTATGGG-ATTATGA-GATT-AAT  1038

seq1  TTCAACATGTATTTTAGAGGCCATGAAGGATATCTAA  1086
      | ||||||| |||||| |||||||||| || ||||||
seq2  TCCAACATGGATTTTA-AGGCCATGAAAGA-ATCTAA  1073