BAC Information

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BAC

Clone NameB6Ng01-018N23
Chromosome8 (Build37)10 (Build37)
Map Location 130,979,663 - 130,980,87724,712,428 - 24,713,321
singlet/doubletsingletsinglet
Overlap geneNrp1
Upstream genePard3, EG628847
Downstream geneLOC668494, Itgb1, LOC100042659, LOC100042667, Ccdc7, 1700008F21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018N23.bB6Ng01-018N23.g
ACCDH852142DH852143
length1,201997
definitionDH852142|Mus musculus domesticus DNA, BAC clone: B6Ng01-018N23, 5' end.DH852143|Mus musculus domesticus DNA, BAC clone: B6Ng01-018N23, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(130,979,663 - 130,980,877)(24,712,428 - 24,713,321)
sequence
gaattcaatccccaaaatccatgtgaaaaagctgtgtgtgatagcactga
cttatgattccatccttgcagagacagacacaagccatacctgaatatac
ataaataaacacacacactacatacacacacaaggggggaggtgtccaag
gactccagttcatgaccagttgcccactgacagccagctaatcacagtgg
gaacacataacagagcagacctttcctttccttttctcttcttttctttt
cttctcttttcttttctttttttttttttgtctttttttaaaattagata
ttttctttatttacatttcaaatgctatcctgaaagttccctataccctc
cccccaccctgctcccccccacttcttggccctggcattcccctgtactg
ggacatacaaagtttgcaagaccaaggggcctctcttcccaatgatggcc
gactaggccatcttctgctacatatgcagctagagacacgagctccgggg
tactgtttagttcatattattgttccacctatagggttgcagaccccttc
agctccttgggtgctttctctagctcctccattgggggccctgtgttcca
tcctatagatggctgtgagcatcgacttctgtatttgccagacactggca
tagcctcacacgagacaactatatcagggtcatttcagcaaaaccttgca
tcagagcagaacttttaattacctggaagtccctactatactccagggta
tgagattaacaaacaagacacaaagtgagggctctcttgttgggaagcct
cactggaaactgaccaagaggaacttacaagctttgctttgtgatgtatt
tcctccctatcatgcttctcaacatagctgcttatatcaaggccatgaaa
aaaatcagaagaaaggagcttcacatgggggcagcttccctgcattcttc
tccttaccagaccatctcaggcgacctgttcttgttcctaagaaccacag
cactcctagggactcacatcatgcactttcttggcagcatcttaccagaa
tgagaaaggtgcctgcaaagaattgggatcaacctggttcagatggagcc
tagttttagcctctcccgagaccacctgtacatcatctttttgcctggat
cttccctctataaaccatgaaaactctgggaataggttaaggtctggaag
a
gaattcacttcttaatgcttttcctgaatgtttctcactgtttctctgac
acatgtgtggacgcccgactcgccagcaaggaagacgccacaacaggatt
cttctgcacacgtttattgggagagcttgatagagaaggcgaaagacccc
aagccccagaactggcactgcttatataggcctaggagtggcatgtctat
acctgattggttgtgctttcagtacctcatttacattccccgggatgggc
tgtgatgtggagcgaaacccttatgcacatgtgcacattggttgtttacc
cgaacttatgggcggtggccagcggtagccagcgccatcttgtaatggtg
taagtggcttttcacatctccctcttttttattattatggcctaatccaa
cgatctagttgctagcctcttcagctcgcaacaatcaagaaggatctcat
ttttggcagaccatgatcaccctatcgcgtgcaatgggcttagcctcagt
gatgtgcaagggctgatcaaggaaatcgagtcttactcatcccagtgcaa
tgggtacacagactcgtggggtgctagagctaaggactcgaatgcctatt
atttatgtagcatgaatacttcagaggaggccccttgttcaatggccatg
agtgcttgggtgatggccaccttgtcacgtttctgttgagatctgaactt
gcaaaccaaccaaagcatgaataccaatccacagcatatggcatcgccaa
aaagaacaactcccacccactccttaaagtaggaaaatgcagaagtaagc
caagaggtaaaatcgccaacagtgatgggtttctattcgagttccattaa
ggcttaaaaatctggcattagatgtaaagaattgaggaaacacttgaatg
cgtcaacggcatgatttcaggaacacagagctcttcagttctcactagcg
ggagcattcccagccacaggaacatccatgtctcacggctccacctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_130979663_130980877
seq2: B6Ng01-018N23.b_48_1248

seq1  GAATTCAATCCCCAAAATCCATGTGAAAAAGCTGTGTGTGATAGCACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCCCCAAAATCCATGTGAAAAAGCTGTGTGTGATAGCACTGA  50

seq1  CTTATGATTCCATCCTTGCAGAGACAGACACAAGCCATACCTGAATATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGATTCCATCCTTGCAGAGACAGACACAAGCCATACCTGAATATAC  100

seq1  ATAAATAAACACACACACTACATACACACACAAGGGGGGAGGTGTCCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAACACACACACTACATACACACACAAGGGGGGAGGTGTCCAAG  150

seq1  GACTCCAGTTCATGACCAGTTGCCCACTGACAGCCAGCTAATCACAGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCAGTTCATGACCAGTTGCCCACTGACAGCCAGCTAATCACAGTGG  200

seq1  GAACACATAACAGAGCAGACCTTTCCTTTCCTTTTCTCTTCTTTTCTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACATAACAGAGCAGACCTTTCCTTTCCTTTTCTCTTCTTTTCTTTT  250

seq1  CTTCTCTTTTCTTTTCTTTTTTTTTTTTTGTCTTTTTTTAAAATTAGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTTTTCTTTTCTTTTTTTTTTTTTGTCTTTTTTTAAAATTAGATA  300

seq1  TTTTCTTTATTTACATTTCAAATGCTATCCTGAAAGTTCCCTATACCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTATTTACATTTCAAATGCTATCCTGAAAGTTCCCTATACCCTC  350

seq1  CCCCCACCCTGCTCCCCCCCACTTCTTGGCCCTGGCATTCCCCTGTACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACCCTGCTCCCCCCCACTTCTTGGCCCTGGCATTCCCCTGTACTG  400

seq1  GGACATACAAAGTTTGCAAGACCAAGGGGCCTCTCTTCCCAATGATGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATACAAAGTTTGCAAGACCAAGGGGCCTCTCTTCCCAATGATGGCC  450

seq1  GACTAGGCCATCTTCTGCTACATATGCAGCTAGAGACACGAGCTCCGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGGCCATCTTCTGCTACATATGCAGCTAGAGACACGAGCTCCGGGG  500

seq1  TACTGTTTAGTTCATATTATTGTTCCACCTATAGGGTTGCAGACCCCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTTTAGTTCATATTATTGTTCCACCTATAGGGTTGCAGACCCCTTC  550

seq1  AGCTCCTTGGGTGCTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGTTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTTGGGTGCTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGTTCCA  600

seq1  TCCTATAGATGGCTGTGAGCATCGACTTCTGTATTTGCCAGACACTGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATAGATGGCTGTGAGCATCGACTTCTGTATTTGCCAGACACTGGCA  650

seq1  TAGCCTCACACGAGACAACTATATCAGGGTCATTTCAGCAAAACCTTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTCACACGAGACAACTATATCAGGGTCATTTCAGCAAAACCTTGCA  700

seq1  TCAGAGCAGAACTTTTAATTACCTGGAAGTCCCTACTATACTCCAGGGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGCAGAACTTTTAATTACCTGGAAGTCCCTACTATACTCCAGGGTA  750

seq1  TGAGATTAACAAACAAGACACAAAGTGA-GGCTCTCTTGTTGGGAAGCCT  799
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGAGATTAACAAACAAGACACAAAGTGAGGGCTCTCTTGTTGGGAAGCCT  800

seq1  CACTGGAAACTGACCAAGAGGAACTTACAAGCTTTGCTTTGTGATGTATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAAACTGACCAAGAGGAACTTACAAGCTTTGCTTTGTGATGTATT  850

seq1  TCCTCCCTATCATGCTTCTCAACATAGCTGCTTATATCAAGGCCATGAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCTATCATGCTTCTCAACATAGCTGCTTATATCAAGGCCATGAAA  900

seq1  AAAATCAGAAGAAAGGAGCTTCACATGGGGGCAGCCTCCCTGCATTCTTC  949
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAAATCAGAAGAAAGGAGCTTCACATGGGGGCAGCTTCCCTGCATTCTTC  950

seq1  TCCTTACCAGACCATCTCAAGCGACCTGTGTCTGTTCCT-AGAACCACAG  998
      ||||||||||||||||||| |||||||||   ||||||| ||||||||||
seq2  TCCTTACCAGACCATCTCAGGCGACCTGTTCTTGTTCCTAAGAACCACAG  1000

seq1  CACTCCTAGGGACTCACATCAGTGCACTTTC-TGGCAGCATCTTACCAGA  1047
      ||||||||||||||||||||| ||||||||| ||||||||||||||||||
seq2  CACTCCTAGGGACTCACATCA-TGCACTTTCTTGGCAGCATCTTACCAGA  1049

seq1  AGGAGATAGGGTGCTGCAAAGAATTGGGATC-AGCTGGGTCAGATAGGAG  1096
      | |||| |||   |||||||||||||||||| | |||| |||||| ||| 
seq2  ATGAGAAAGGTGCCTGCAAAGAATTGGGATCAACCTGGTTCAGAT-GGA-  1097

seq1  GCCTAGTTTATGCCTCTCCAGGAGCCAACGTGTACATCTATCTTTTTTTG  1146
      |||||||||  ||||||||  ||| | || |||||||| |||  ||||||
seq2  GCCTAGTTTTAGCCTCTCC-CGAGACCACCTGTACATC-ATC--TTTTTG  1143

seq1  TCTTGATTCTTCCTCTGTAAAATAACACATATGATATACTTTGGGAAATA  1196
       || |||  | ||||| ||||         |||| | ||| |||| ||||
seq2  CCTGGATCTTCCCTCTATAAA-------CCATGA-AAACTCTGGG-AATA  1184

seq1  GGTTAAATGTCTTGGAAGA  1215
      |||| || ||| |||||||
seq2  GGTT-AAGGTC-TGGAAGA  1201

seq1: chr10_24712428_24713321
seq2: B6Ng01-018N23.g_122_1010

seq1  GTGTGGACGCCCGACTCACCAGCAAGGAAGAAGCCACAACAGGATTCTTC  50
      ||||||||||||||||| ||||||||||||| ||||||||||||||||||
seq2  GTGTGGACGCCCGACTCGCCAGCAAGGAAGACGCCACAACAGGATTCTTC  50

seq1  TGCACACGTTTATTGGGAGAGCTTGATAGAGAAGGCGAAAGACCCCGAGC  100
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGCACACGTTTATTGGGAGAGCTTGATAGAGAAGGCGAAAGACCCCAAGC  100

seq1  CCCAGAACTGGCACTGCTTATATAGGCCTAGGAGTGGCGTGTCTATACCT  150
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCCAGAACTGGCACTGCTTATATAGGCCTAGGAGTGGCATGTCTATACCT  150

seq1  GATTGGTTGTGCTTTCAGTACCTCATTTACATTCTCCGGGATGGGCTGTG  200
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GATTGGTTGTGCTTTCAGTACCTCATTTACATTCCCCGGGATGGGCTGTG  200

seq1  ACGTGGTGCGAAACCCTTATGCACATGCACACATTGGGTTGTTTACCCGA  250
      | |||| ||||||||||||||||||||  |||||| ||||||||||||||
seq2  ATGTGGAGCGAAACCCTTATGCACATGTGCACATT-GGTTGTTTACCCGA  249

seq1  ACTTATGGGCGGTGGCCAGTGGTAGCCAGCGCCATCTTGTAATGGCATAT  300
      ||||||||||||||||||| |||||||||||||||||||||||||  || 
seq2  ACTTATGGGCGGTGGCCAGCGGTAGCCAGCGCCATCTTGTAATGGTGTAA  299

seq1  GTGGCTTCCCACATCTCCCCCTTTATTATTATTATGGCCTAATCCAACTA  350
      |||||||  |||||||||| |||| ||||||||||||||||||||||| |
seq2  GTGGCTTTTCACATCTCCCTCTTTTTTATTATTATGGCCTAATCCAACGA  349

seq1  TCTAGTCGCTAGCCTCTTCAGCTCGCAACGATCAAGAAGGATCTCGTTTT  400
      |||||| |||||||||||||||||||||| ||||||||||||||| ||||
seq2  TCTAGTTGCTAGCCTCTTCAGCTCGCAACAATCAAGAAGGATCTCATTTT  399

seq1  TGGCAGACCATGATCACCCTATCTCATGCAATGGGCATAGTCTCAGCAAT  450
      ||||||||||||||||||||||| | |||||||||| ||| |||||  ||
seq2  TGGCAGACCATGATCACCCTATCGCGTGCAATGGGCTTAGCCTCAGTGAT  449

seq1  GTGCAAGGGCTGATCAAGGAAAT-GAGTCTTACTCATCCCAGTGCAATGG  499
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTGCAAGGGCTGATCAAGGAAATCGAGTCTTACTCATCCCAGTGCAATGG  499

seq1  GTACACAGACCCGTGGGGTGCTTGAGCTAAGGACTCGAATGCCTATTATT  549
      |||||||||| ||||||||||| |||||||||||||||||||||||||||
seq2  GTACACAGACTCGTGGGGTGCTAGAGCTAAGGACTCGAATGCCTATTATT  549

seq1  TATGTAGCATGGATAACTATACTTCAGAGGAGGCCCCTTGTTCAATGGCC  599
      |||||||||||       ||||||||||||||||||||||||||||||||
seq2  TATGTAGCATG------AATACTTCAGAGGAGGCCCCTTGTTCAATGGCC  593

seq1  ATGAGTGCTTGGGTGATGGTCACCTTGTCACGTTTCTGTTGAGATCTGAA  649
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATGAGTGCTTGGGTGATGGCCACCTTGTCACGTTTCTGTTGAGATCTGAA  643

seq1  CTTGCAAACCAACCAAAGCATGAATACCAATCCACAGCATCTGGCAGCGC  699
      |||||||||||||||||||||||||||||||||||||||| ||||| |||
seq2  CTTGCAAACCAACCAAAGCATGAATACCAATCCACAGCATATGGCATCGC  693

seq1  CAAAAAGAACAACTCCCACCCACTCCTTAAAGGAGGAAAATGCAGAGGTA  749
      |||||||||||||||||||||||||||||||| ||||||||||||| |||
seq2  CAAAAAGAACAACTCCCACCCACTCCTTAAAGTAGGAAAATGCAGAAGTA  743

seq1  AGCCAAGAGGTAAAATCACCAACAGTGATGGG-TTCTATTCAAGTTCCAT  798
      ||||||||||||||||| |||||||||||||| |||||||| ||||||||
seq2  AGCCAAGAGGTAAAATCGCCAACAGTGATGGGTTTCTATTCGAGTTCCAT  793

seq1  TAAGGCTT-AAAATCTGGCATTAGATGTAAAGAATTGAGGAAACACTTGA  847
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCTTAAAAATCTGGCATTAGATGTAAAGAATTGAGGAAACACTTGA  843

seq1  ATGTGTCAATGGCATGGTTTTCAGGAACACAGAGCTCTTCAGTTCTC  894
      ||| ||||| ||||| | |||||||||||||||||||||||||||||
seq2  ATGCGTCAACGGCAT-GATTTCAGGAACACAGAGCTCTTCAGTTCTC  889