BAC Information

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BAC

Clone NameB6Ng01-018O05
Chromosome10 (Build37)
Map Location 110,754,605 - 110,911,867
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042506, LOC100042510, LOC667855, 9230102K24Rik, LOC100042518, E2f7, Csrp2, Zdhhc17, EG432502, LOC667904, Osbpl8, Bbs10
Downstream geneNap1l1, EG382421, Phlda1, Krr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2, Kcnc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018O05.bB6Ng01-018O05.g
ACCDH852154DH852155
length636940
definitionDH852154|Mus musculus domesticus DNA, BAC clone: B6Ng01-018O05, 5' end.DH852155|Mus musculus domesticus DNA, BAC clone: B6Ng01-018O05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,911,233 - 110,911,867)(110,754,605 - 110,755,546)
sequence
gaattccaagaccactgaaacctcccatttactggtagttttaaaattaa
aggtgcacgcctttaatcccagcacttgggaggcagaggcaggtgggttt
ctgagttccaggccagtttggtgtacagaatgagttctaggacagccagg
gctacacagaaaaaccctgtctggaaaccaccacccccaccccatcccgc
cccccccaaaaaaatcaaaaaacaaaaaaatgtaaattttaggcactcct
ctaatccaaagtattctttggatattaagtttgggaaggtgttttgatgg
cgtctattttcaaaagtggtaaactttatgttggctctcctgaaattaga
ggtgttgggaaagtctttaaaacgtttctcattttggaatttagagacag
gagacagtctgaagtagttagccctggaagatagcctgtatgcctggtgc
atccttttagtctgggaagccctgccctctggacaggacctgtctccgcc
ctccctccgatgccactcctgagatctttacagaaatgtggcgcactgag
cttggtcagtatattattaatgccttgttccaccccatggtccttccact
ttcatccctagtgagaattctggggggagggagggg
gaattccttcaacaatgaacagtgctgtggaaatgtaagccagatcagtt
ccttcctccccagtttgcttctggtcctagtgtttcattagttcaggaag
gactggtgaagacgaggaggaaagggaacctgtgatcaagttcccggaac
gcctgggacatgtaagaggctaagggtgagagggttttaagatgaagtaa
gcctggctttcatggcaagactggactgccagaattaaacagagaggaac
ctccccgcatctgtacacttagaaattaggaaattaatgcacccattctg
gaaaaaaaaatagcgtgggtggttcccacaaaactaaaagtaaatcagca
gtgggtccagcactcctgttctgggtatgtgactaaaggaaatgaaataa
cacctaagtgtatccacgtttggtgctattcacggcatctgcgtgcagtt
gacaggtaagtcgaccgagaaattgttctgtgtatacacaactgaatacc
attcagtcattaacgagaaaacagttttgctatttttgacaactaagttc
aaagtggaaggcattttgctaagagagatactgcaccaccttggggcctg
ttaagtaagccgttatgtaacaggtaaccatggaaactgcagctgtgtcc
tggtagctctgtctcctgatgctaagaattccccttgtggttaaacactg
ttgaatctgcctgtaggattttcctgctatgtgtgaatcccagacctcag
aggttttctcagctatcaccttcgcactagcaaagggtctgtacccccaa
gagtgcctggagctgttctaatgtcatctccactgtgatttttgacccac
ccaccccaccccacccctgtacctacctttcgtgtcttgaaaaagtcacg
ggaggaagaattctaaaagggagattggctccatcatgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_110911233_110911867
seq2: B6Ng01-018O05.b_47_682 (reverse)

seq1  CCCCTCCCTCCCCCCAGAATTCTCACTAGGGATG-AAGTGGAAGGACCAT  49
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCCCTCCCTCCCCCCAGAATTCTCACTAGGGATGAAAGTGGAAGGACCAT  50

seq1  GGGGTGGAACAAGGCATTAATAATATACTGACCAAGCTCAGTGCGCCACA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGAACAAGGCATTAATAATATACTGACCAAGCTCAGTGCGCCACA  100

seq1  TTTCTGTAAAGATCTCAGGAGTGGCATCGGAGGGAGGGCGGAGACAGGTC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTAAAGATCTCAGGAGTGGCATCGGAGGGAGGGCGGAGACAGGTC  150

seq1  CTGTCCAGAGGGCAGGGCTTCCCAGACTAAAAGGATGCACCAGGCATACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCAGAGGGCAGGGCTTCCCAGACTAAAAGGATGCACCAGGCATACA  200

seq1  GGCTATCTTCCAGGGCTAACTACTTCAGACTGTCTCCTGTCTCTAAATTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATCTTCCAGGGCTAACTACTTCAGACTGTCTCCTGTCTCTAAATTC  250

seq1  CAAAATGAGAAACGTTTTAAAGACTTTCCCAACACCTCTAATTTCAGGAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGAGAAACGTTTTAAAGACTTTCCCAACACCTCTAATTTCAGGAG  300

seq1  AGCCAACATAAAGTTTACCACTTTTGAAAATAGACGCCATCAAAACACCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAACATAAAGTTTACCACTTTTGAAAATAGACGCCATCAAAACACCT  350

seq1  TCCCAAACTTAATATCCAAAGAATACTTTGGATTAGAGGAGTGCCTAAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAACTTAATATCCAAAGAATACTTTGGATTAGAGGAGTGCCTAAAA  400

seq1  TTTACATTTTTTTGTTTTTTGATTTTTTTGGGGGGGGCGGGATGGGGTGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATTTTTTTGTTTTTTGATTTTTTTGGGGGGGGCGGGATGGGGTGG  450

seq1  GGGTGGTGGTTTCCAGACAGGGTTTTTCTGTGTAGCCCTGGCTGTCCTAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGTGGTTTCCAGACAGGGTTTTTCTGTGTAGCCCTGGCTGTCCTAG  500

seq1  AACTCATTCTGTACACCAAACTGGCCTGGAACTCAGAAACCCACCTGCCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATTCTGTACACCAAACTGGCCTGGAACTCAGAAACCCACCTGCCT  550

seq1  CTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCTTTAATTTTAAAACT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCTTTAATTTTAAAACT  600

seq1  ACCAGTAAATGGGAGGTTTCAGTGGTCTTGGAATTC  635
      ||||||||||||||||||||||||||||||||||||
seq2  ACCAGTAAATGGGAGGTTTCAGTGGTCTTGGAATTC  636

seq1: chr10_110754605_110755546
seq2: B6Ng01-018O05.g_70_1009

seq1  GAATTCCTTCAACAATGAACAGTGCTGTGGAAATGTAAGCCAGATCAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCAACAATGAACAGTGCTGTGGAAATGTAAGCCAGATCAGTT  50

seq1  CCTTCCTCCCCAGTTTGCTTCTGGTCCTAGTGTTTCATTAGTTCAGGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTCCCCAGTTTGCTTCTGGTCCTAGTGTTTCATTAGTTCAGGAAG  100

seq1  GACTGGTGAAGACGAGGAGGAAAGGGAACCTGTGATCAAGTTCCCGGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGTGAAGACGAGGAGGAAAGGGAACCTGTGATCAAGTTCCCGGAAC  150

seq1  GCCTGGGACATGTAAGAGGCTAAGGGTGAGAGGGTTTTAAGATGAAGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGGACATGTAAGAGGCTAAGGGTGAGAGGGTTTTAAGATGAAGTAA  200

seq1  GCCTGGCTTTCATGGCAAGACTGGACTGCCAGAATTAAACAGAGAGGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGCTTTCATGGCAAGACTGGACTGCCAGAATTAAACAGAGAGGAAC  250

seq1  CTCCCCGCATCTGTACACTTAGAAATTAGGAAATTAATGCACCCATTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCGCATCTGTACACTTAGAAATTAGGAAATTAATGCACCCATTCTG  300

seq1  GAAAAAAAAATAGCGTGGGTGGTTCCCACAAAACTAAAAGTAAATCAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAATAGCGTGGGTGGTTCCCACAAAACTAAAAGTAAATCAGCA  350

seq1  GTGGGTCCAGCACTCCTGTTCTGGGTATGTGACTAAAGGAAATGAAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTCCAGCACTCCTGTTCTGGGTATGTGACTAAAGGAAATGAAATAA  400

seq1  CACCTAAGTGTATCCACGTTTGGTGCTATTCACGGCATCTGCGTGCAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAAGTGTATCCACGTTTGGTGCTATTCACGGCATCTGCGTGCAGTT  450

seq1  GACAGGTAAGTCGACCGAGAAATTGTTCTGTGTATACACAACTGAATACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGTAAGTCGACCGAGAAATTGTTCTGTGTATACACAACTGAATACC  500

seq1  ATTCAGTCATTAACGAGAAAACAGTTTTGCTATTTTTGACAACTAAGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTCATTAACGAGAAAACAGTTTTGCTATTTTTGACAACTAAGTTC  550

seq1  AAAGTGGAAGGCATTTTGCTAAGAGAGATACTGCACCACCTTGGGGCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGAAGGCATTTTGCTAAGAGAGATACTGCACCACCTTGGGGCCTG  600

seq1  TTAAGTAAGCCGTTATGTAACAGGTAACCATGGAAACTGCAGCTGTGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTAAGCCGTTATGTAACAGGTAACCATGGAAACTGCAGCTGTGTCC  650

seq1  TGGTAGCTCTGTCTCCTGATGCTAAGAATTCCCCTTGTGGTTAAACACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGCTCTGTCTCCTGATGCTAAGAATTCCCCTTGTGGTTAAACACTG  700

seq1  TTGAATCTGCCTGTAGGATTTTCCTGCTATGTGTGAATCCCAGACCTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCTGCCTGTAGGATTTTCCTGCTATGTGTGAATCCCAGACCTCAG  750

seq1  AGGTTTTCTCAGCTATCACCTTCGCACTAGCAAAGGGTCTGTACCCCCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTCTCAGCTATCACCTTCGCACTAGCAAAGGGTCTGTACCCCCAA  800

seq1  GAGTGCCTGGAGCTGTTCTAATGTCATCTCCACTGTGATTTTTGACCCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCCTGGAGCTGTTCTAATGTCATCTCCACTGTGATTTTTGACCCAC  850

seq1  CCACCCCACCCCACCCCTGTACCTACCTTTCCGTGTCTTGAAAAAGATCA  900
      |||||||||||||||||||||||||||||| ||||||||||||||| |||
seq2  CCACCCCACCCCACCCCTGTACCTACCTTT-CGTGTCTTGAAAAAG-TCA  898

seq1  CGGGAGGAAGAATTCTAAAAGGGAGATTGGCTCCATCATGAT  942
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAGGAAGAATTCTAAAAGGGAGATTGGCTCCATCATGAT  940