BAC Information

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BAC

Clone NameB6Ng01-019B11
Chromosome10 (Build37)
Map Location 29,672,069 - 29,673,195
singlet/doubletsinglet
Overlap genenone
Upstream gene2310057J18Rik, LOC432447, 6330407J23Rik, Echdc1, Rnf146, Rspo3, EG630389, Rpl12, LOC623064
Downstream geneLOC674389, Gm232, LOC667696, LOC100040542, 2610036L11Rik, LOC212815, Trmt11, Hint3, Ncoa7, LOC382354, Hey2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019B11.bB6Ng01-019B11.g
ACCDH852285DH852286
length1,1801,115
definitionDH852285|Mus musculus domesticus DNA, BAC clone: B6Ng01-019B11, 5' end.DH852286|Mus musculus domesticus DNA, BAC clone: B6Ng01-019B11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggccagcctgggctgtggggcctgatctcagggaaacaaaca
aacaaaacccccaccaccaaggtaataataataacaacaatagggagcat
gttttgtactgagctttcctcacttagaagttaaggaacctcagatagat
acaggaaaatgctgtttcccaagtgagtttgaatctactcaagttggtaa
caaagcttagctatgacaatgagcaatttaaaaataggttagaaattccc
ctgtagcaagtacagtactgccattctcttgccatttccactggcctcat
cttctgtatttttattccctaaatttttgtatgaaacatccctctgcttc
taaagatatcttaaaaaaaaattgagatgtgtaaaccactcttcagttaa
aaaaagagccagtggactcttcaagtttcaaaaccctgaatttaatttca
tatgtaaagtcattttttaaaaaatataaggtaatatttatacatctgta
atggctattcctggttgttaacttgactatatcttgaatgaaatacaata
cagaattggagggcacacccgtgacccacaacttgaggctaaaagactca
agtttctgacctggatcttggcatggagatcttgaggcatagtggacaca
aaaagtttaggccaggcaaagtattacacacctttaatcccaggagactg
aggcaaggagttctgcgttcaatgtcagtctggggcaaagcaagtcccag
atctaggtgtggtggtagacaactttagtctgggccacaccttctactgg
agacctatataaggacactggaagaaggaagattcactcttctttacctg
cttacatttacttgccagcatctctgttggaatctacttctacagaagac
cagctaaaacaactagcctcatggaactgagcaactactatattcttaga
cttcccattcacagctaaccatgtcttggtagttgaactacagactgtaa
attatgacagtaaatttcccccaagtgaataagagacacttcataaattc
tggtaacttctagagaatgactaatacagaacttggtactaggagtgggg
tattatgttgtaggcctgccatgttttgtttggaaaaagtgattggaaga
tttgattggaaagctatcaagcttctaccg
gaattcactgtctcacaagtcacccaatgcacagtaatcaataagggaca
agacagaagaaaggctcagaaggaagggcaacgttgaaactaagaaatgc
tttgactatcataggggtgaatggctgaggaaatagatgaagcagcaaga
tgaggatttgctatcgatcagattccttactttactatgtgcagtaagat
gttgacagattccatgtgactgtcagaaagctgaaagaacataggatatt
tgacagacagtagttttctactagcaactatagacttgtcataatgtgtt
aacaatcctgcaaagttcataaaggtaaattttattattttaaaattata
attatgtcactttacacttctcctttcctctcttctacctcccccttaag
ttctctaaaattcatggcctctggccccttttactttaattgttttgatg
agcactacaaaggagcatattctccattaaagtgttcatctaattttaac
ctttgatcatgatggcacagtgctatttatccttcaggtttttgtttcat
atttcccatcctttgccacaaattggtaggactcatgtcctctgccaggc
cagcaggttgtagggacatgttctgatcaacaatcacaactcaaggaata
gatttgccacctatatttctgcctccattttgagcccggttgtaaccatg
cagaaatgttcttgcaacaggactccatgtttctgatttgacagaacctc
ataaatataacatatctgcaaattcaacaacccctgcatctccagagatc
ctcaacaatgagatattaccatgtgagttctgtctcttgcttccacttcc
attattgagaagcaattctatgcttgttcctagagacttcaaaacagtga
ataagtagcccaggctactcattacagcatcgtctgaattaattatattt
catatgttctatgatgcattgtatgtaatcaaagttttaagcatagaatg
tggtgtaatatgtaaaagaatctagaccttaccaatataatatttgaagt
atctttgggagaaaagttgaaaggaagactgtcgaccttagcactataaa
aaaaagttccttttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_29672069_29673195
seq2: B6Ng01-019B11.g_67_1181

seq1  GAATTCACTGTCTCACAAGTCACCCAATGCACAGTAATCAATAAGGGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTCTCACAAGTCACCCAATGCACAGTAATCAATAAGGGACA  50

seq1  AGACAGAAGAAAGGCTCAGAAGGAAGGGCAACGTTGAAACTAAGAAATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAAGAAAGGCTCAGAAGGAAGGGCAACGTTGAAACTAAGAAATGC  100

seq1  TTTGACTATCATAGGGGTGAATGGCTGAGGAAATAGATGAAGCAGCAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTATCATAGGGGTGAATGGCTGAGGAAATAGATGAAGCAGCAAGA  150

seq1  TGAGGATTTGCTATCGATCAGATTCCTTACTTTACTATGTGCAGTAAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGATTTGCTATCGATCAGATTCCTTACTTTACTATGTGCAGTAAGAT  200

seq1  GTTGACAGATTCCATGTGACTGTCAGAAAGCTGAAAGAACATAGGATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACAGATTCCATGTGACTGTCAGAAAGCTGAAAGAACATAGGATATT  250

seq1  TGACAGACAGTAGTTTTCTACTAGCAACTATAGACTTGTCATAATGTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGACAGTAGTTTTCTACTAGCAACTATAGACTTGTCATAATGTGTT  300

seq1  AACAATCCTGCAAAGTTCATAAAGGTAAATTTTATTATTTTAAAATTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATCCTGCAAAGTTCATAAAGGTAAATTTTATTATTTTAAAATTATA  350

seq1  ATTATGTCACTTTACACTTCTCCTTTCCTCTCTTCTACCTCCCCCTTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTCACTTTACACTTCTCCTTTCCTCTCTTCTACCTCCCCCTTAAG  400

seq1  TTCTCTAAAATTCATGGCCTCTGGCCCCTTTTACTTTAATTGTTTTGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAAAATTCATGGCCTCTGGCCCCTTTTACTTTAATTGTTTTGATG  450

seq1  AGCACTACAAAGGAGCATATTCTCCATTAAAGTGTTCATCTAATTTTAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTACAAAGGAGCATATTCTCCATTAAAGTGTTCATCTAATTTTAAC  500

seq1  CTTTGATCATGATGGCACAGTGCTATTTATCCTTCAGGTTTTTGTTTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATCATGATGGCACAGTGCTATTTATCCTTCAGGTTTTTGTTTCAT  550

seq1  ATTTCCCATCCTTTGCCACAAATTGGTAGGACTCATGTCCTCTGCCAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCATCCTTTGCCACAAATTGGTAGGACTCATGTCCTCTGCCAGGC  600

seq1  CAGCAGGTTGTAGGGACATGTTCTGATCAACAATCACAACTCAAGGAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGTTGTAGGGACATGTTCTGATCAACAATCACAACTCAAGGAATA  650

seq1  GATTTGCCACCTATATTTCTGCCTCCATTTTGAGCCCGGTTGTAACCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGCCACCTATATTTCTGCCTCCATTTTGAGCCCGGTTGTAACCATG  700

seq1  CAGAAATGTTCTTGCAACAGGACTCCATGTTTCTGATTTGACAGAACCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATGTTCTTGCAACAGGACTCCATGTTTCTGATTTGACAGAACCTC  750

seq1  ATAAATATAACATATCTGCAAATTCAACAACCCCTGCATCTCCAGAGATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATAACATATCTGCAAATTCAACAACCCCTGCATCTCCAGAGATC  800

seq1  CTCAACAATGAGATATTACCATGTGAGTTCTGTCTCTTGCTTCCCACTTC  850
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTCAACAATGAGATATTACCATGTGAGTTCTGTCTCTTGCTT-CCACTTC  849

seq1  CATTATTGAGAAGCAATTCTATGCTTGTTCCTAGAGACTTCAAAAACAGT  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CATTATTGAGAAGCAATTCTATGCTTGTTCCTAGAGACTTC-AAAACAGT  898

seq1  GAATAAGTAGCCCAGGCTACTCATTACAGCATCGTCTGAATTAATTATTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAATAAGTAGCCCAGGCTACTCATTACAGCATCGTCTGAATTAATTA-TA  947

seq1  TTTCATATGTTCTATGATGCAATTGTATTGTAATCAAAGTTTTAAGCATA  1000
      |||||||||||||||||||| |||||| ||||||||||||||||||||||
seq2  TTTCATATGTTCTATGATGC-ATTGTA-TGTAATCAAAGTTTTAAGCATA  995

seq1  GAAATGT-GTGTAATATGTAAAAAGAAACTAGAACCTTACAAATAATATA  1049
      | ||||| ||||||||||| ||||||| |||| ||||||| ||||  |||
seq2  G-AATGTGGTGTAATATGT-AAAAGAATCTAG-ACCTTACCAATATAATA  1042

seq1  TTTGAAAGTATCTTTGGAGAAAAAGTTGAAAGTGAAGACTGTCAGACCCT  1099
      |||| ||||||||||||   |||||||||||| |||||||||| ||||  
seq2  TTTG-AAGTATCTTTGGGAGAAAAGTTGAAAG-GAAGACTGTC-GACC--  1087

seq1  TTAGCACTATAAAAAAAAAGTTCTTTTC  1127
      ||||||||||||||||||  | ||||||
seq2  TTAGCACTATAAAAAAAAGTTCCTTTTC  1115