BAC Information

Click to search

BAC

Clone NameB6Ng01-019J12
Chromosome10 (Build37)
Map Location 16,787,562 - 16,788,732
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382457, LOC546472, LOC100039576, LOC627511
Downstream geneCited2, Txlnb, LOC665321, Heca, 3110003A17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019J12.bB6Ng01-019J12.g
ACCDH852637DH852638
length1,2621,152
definitionDH852637|Mus musculus domesticus DNA, BAC clone: B6Ng01-019J12, 5' end.DH852638|Mus musculus domesticus DNA, BAC clone: B6Ng01-019J12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaagaagatctcagaagatggaaagatattccacactcatggat
tggcagaattaatatggtaaaaatggccatcttgctgaaagcaatctaca
gattctatgcaattcccataaaaattccaactcaattcttcatatagtta
gaaagaacaattttcaaattcatttggaataacaaaaaactcaggatact
gaaaactgttctaaaaaacaaaaaacaaaaaaacaacttctgaaggaatt
acatccctgacctcaagctgtattacagagcaatagtgataaaaacggca
tgatatcggtatagatacaggcaggtatatcaatggaataagaattgaag
acccagaaatgaatccacacacatataatcactttatctttgacaaagga
gctaaaaccattcagtatataaaagacagcattttaaacaaatggtgctg
gttcaactggctatcagcatgtagaagttgcaaattgatccattcttaac
accttgtacaaagctcaagtccaagtggatcaaggacctccatgtaaaac
cagatatactgaaacttacaaaggacaaagtggggaagaacttcgaatat
atgggcacagggggaaaattcctgaacacaataccagtagcttgtaatca
aaaatcaacaaatgggacctcataaaattacaaagctcctgtaaggcaga
ggacactgtcaataggaaaaaaaaaaaaaaaaaaaaaaaaaaagcaacca
acagattggaaaaagctctttaccaatcctacatctgatagagggctaat
atctagtattaactcaaagattattataaatggggtacagaactaaacaa
agcatttcaactgaggaatatcaaatggctgagaagcaccaaaagaaatg
ttcaacatcctcagtcatcaggaaatgcaaatcaaacatccctgagattc
ttcctcccaccagtcagaatgctaagatcaaaactccagtgacagcagat
gctgtgagatgtggagaagaggaaccctccctccattgctgtggatgcag
cttgtaccccccctctgaatcagtttgcattcctcagaatgacatgttta
tttgagaccctcaatagcactcctgagcattacccgagatgtcttccgca
gataaggacattgctcaaatgtctctcgcacctatttaatcaggatggac
cagtctcagaagttacgagtgcctttctaggtaactactcgattttaacg
agtcttctgcat
gaattccaacacacacacacacacacacacacacacacacacacacacac
acacacacactgtagatttgtctgttgatcatatgatttgctgttcttta
gtttgaagtcctatagcaaggtccttactaagggatacatgatcttacct
gttttgatttttgcttctgactgtagttccagttctgtgtctcattcctt
tccctgtgagttaagcagttatgacaatagatcacaattataattggcag
cctttttgataggctaaatataggcataaaggacttgactatattgaact
gtgagcattaaaaaaggttatggggtagctaccttcattttatagaggag
cagacggactcacaggaaaaactagaatatacactcatgtagtcagcttt
tggtattcaaactcacaaatgtattattgttcagtgtctttgagtttgtc
tccaaatgagtgtgattcaggaagtccaccacactcctgtgtgtataatg
atctctttattcagtaatcctgcttcggcctgaaaaggtggacccactat
ttcttttttccttgcttctcatatgtgctttgtttttatacactaacaac
tgaacacataaaatttttgattgtctaattttgaaataatactttttttt
gtaaagaaatcagattgtttgcagagcccctgaaaatataaatatttaac
tattttactggaaggttatttaacctggagttttcactggttttgatttt
tccataagttccttgtatgctggaataaagtgacagttttggtttggttt
gtctaagaatcatctctttataaaattgtattttttgataaattcttcaa
ttttaagaatttcatatatgattattatgtttaaataatttcattccatc
tttcttcaaaatatgaattccatctttttgatgggtttaagttcaattag
atgactgttggttacatctaagatgtagtgccactattgcacatttggag
atgtgtcacattagtcattgttgttggttattggagtcatacaggatagt
cttgctttttgcccataacagggttttagaactagatggccacttcccca
atacaggactagggtaaaatttgaagcaccaaagcattgcagagcctagc
tt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_16787562_16788732
seq2: B6Ng01-019J12.g_68_1219 (reverse)

seq1  AAGCATAGGCTACTGCAATTGGCTTTGGTTGCCTTCAAAATTTTAAACTT  50
      |||| |||||| |||||||  ||||||||   |||||||  ||| | | |
seq2  AAGC-TAGGCT-CTGCAAT--GCTTTGGT--GCTTCAAA--TTTTACCCT  42

seq1  AGTCCTGATTTGGAGGAAGTGGGCCATCTATGATCTTAAAACCCTGTTAT  100
      |||||||  |||| |||||| ||||||||| | || ||||||||||||||
seq2  AGTCCTGTATTGG-GGAAGT-GGCCATCTA-GTTC-TAAAACCCTGTTAT  88

seq1  GGGCAAAAAGCAAGACCTATCCTGCTATGACTCCAATTAACCACAACAAT  150
      ||||||||||||||| |||||||| |||||||||||| | | ||||||||
seq2  GGGCAAAAAGCAAGA-CTATCCTG-TATGACTCCAATAACCAACAACAAT  136

seq1  GACTAATGTGACACATCTCCAAATGTGCAATAGTGGCACTTACATCTTAG  200
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GACTAATGTGACACATCTCCAAATGTGCAATAGTGGCAC-TACATCTTAG  185

seq1  ATGTAACCAACAGTCATCTAATTGAACTTAAAACCCATTCAAAAAGATGG  250
      ||||||||||||||||||||||||||||| ||||||| ||||||||||||
seq2  ATGTAACCAACAGTCATCTAATTGAACTT-AAACCCA-TCAAAAAGATGG  233

seq1  AATTCATATTTTGAAGAAAAGATGGAATGAAATTATTTAAACATAATAAT  300
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AATTCATATTTTGAAG-AAAGATGGAATGAAATTATTTAAACATAATAAT  282

seq1  CATATATGAAATTCTTAAAATTGAAGAATTTATCAAAAAATACAATTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATGAAATTCTTAAAATTGAAGAATTTATCAAAAAATACAATTTTA  332

seq1  TAAAGAGATGATTCTTAGACAAACCAAACCAAAACTGTCACTTTATTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGATGATTCTTAGACAAACCAAACCAAAACTGTCACTTTATTCCA  382

seq1  GCATACAAGGAACTTATGGAAAAATCAAAACCAGTGAAAACTCCAGGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACAAGGAACTTATGGAAAAATCAAAACCAGTGAAAACTCCAGGTTA  432

seq1  AATAAACCTTCCAGTAAAATAGTTAAATATTTATATTTTCAGGGGCTCTG  500
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAT-AACCTTCCAGTAAAATAGTTAAATATTTATATTTTCAGGGGCTCTG  481

seq1  CAAACAATCTGATTTCTTTACAAAAAAAAGTATTATTTCAAAATTAGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAATCTGATTTCTTTACAAAAAAAAGTATTATTTCAAAATTAGACA  531

seq1  ATCAAAAATTTTATGTGTTCAGTTGTTAGTGTATAAAAACAAAGCACATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAAATTTTATGTGTTCAGTTGTTAGTGTATAAAAACAAAGCACATA  581

seq1  TGAGAAGCAAGGAAAAAAGAAATAGTGGGTCCACCTTTTCAGGCCGAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGCAAGGAAAAAAGAAATAGTGGGTCCACCTTTTCAGGCCGAAGC  631

seq1  AGGATTACTGAATAAAGAGATCATTATACACACAGGAGTGTGGTGGACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTACTGAATAAAGAGATCATTATACACACAGGAGTGTGGTGGACTT  681

seq1  CCTGAATCACACTCATTTGGAGACAAACTCAAAGACACTGAACAATAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATCACACTCATTTGGAGACAAACTCAAAGACACTGAACAATAATA  731

seq1  CATTTGTGAGTTTGAATACCAAAAGCTGACTACATGAGTGTATATTCTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTGAGTTTGAATACCAAAAGCTGACTACATGAGTGTATATTCTAG  781

seq1  TTTTTCCTGTGAGTCCGTCTGCTCCTCTATAAAATGAAGGTAGCTACCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTGTGAGTCCGTCTGCTCCTCTATAAAATGAAGGTAGCTACCCC  831

seq1  ATAACCTTTTTTAATGCTCACAGTTCAATATAGTCAAGTCCTTTATGCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTTTTTTAATGCTCACAGTTCAATATAGTCAAGTCCTTTATGCCT  881

seq1  ATATTTAGCCTATCAAAAAGGCTGCCAATTATAATTGTGATCTATTGTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAGCCTATCAAAAAGGCTGCCAATTATAATTGTGATCTATTGTCA  931

seq1  TAACTGCTTAACTCACAGGGAAAGGAATGAGACACAGAACTGGAACTACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGCTTAACTCACAGGGAAAGGAATGAGACACAGAACTGGAACTACA  981

seq1  GTCAGAAGCAAAAATCAAAACAGGTAAGATCATGTATCCCTTAGTAAGGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAAGCAAAAATCAAAACAGGTAAGATCATGTATCCCTTAGTAAGGA  1031

seq1  CCTTGCTATAGGACTTCAAACTAAAGAACAGCAAATCATATGATCAACAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCTATAGGACTTCAAACTAAAGAACAGCAAATCATATGATCAACAG  1081

seq1  ACAAATCTACAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCTACAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  1131

seq1  TGTGTGTGTGTGTTGGAATTC  1171
      |||||||||||||||||||||
seq2  TGTGTGTGTGTGTTGGAATTC  1152