BAC Information

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BAC

Clone NameB6Ng01-020J16
Chromosome10 (Build37)7 (Build37)
Map Location 104,053,911 - 104,054,363123,878,359 - 123,879,195
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020J16.bB6Ng01-020J16.g
ACCDH853359DH853360
length981836
definitionDH853359|Mus musculus domesticus DNA, BAC clone: B6Ng01-020J16, 5' end.DH853360|Mus musculus domesticus DNA, BAC clone: B6Ng01-020J16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,911 - 104,054,363)(123,878,359 - 123,879,195)
sequence
gaattctcacctgaggaatacctaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacatctctgagat
tccacctcacaccagtcagaatggctaagaccaaaaattcaggtgacagc
agatgctgacgaggatgtggagaaaggaacactcctccatttttggtggg
attgcaagcttgtaaaaccactctggaaatcagtctggtggttcctcaga
aaattggacatagtactaccggaggatcctgcaatacctctcctgggcat
atatccagaagatgtcccaaccggtaagaaggacacatgctccactatgt
tcatagcagcattatttataatagccagaagctggaaagaacccagatgc
ccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgga
gtacactcagctaataaaaagaatgaatttatgaaattcctaggcaaatg
gatggacctggagggcatcaccctgagtgaggtaacccaatcacaaaaga
attcacatgatatttactcactgataagtggatattagcccagaaactta
gaataccaaagatataagatacaatttgctaaacacatgaaactcaagaa
gaacgaaggccaaagtgtggatactttgccccgtcttagaatttggaaca
aaacacccatggaaggagttacagagacaaagtttggagctgagacgaaa
ggatggaccatctagagactgcaatatccagggatccatcccataatcag
cctccaaatgctgacaccattgcatacactagcaagattttgctgaaaga
accctgatatagctgtgtcttgtgagacaatacccggggcctagcaaaca
cagaagtggatgctcacagtcagctattggatggaacacagggccccaat
ttgaggagctagagaaagtacccaagagctg
gaattccaggtgctcagaaggctgagcagatagactttcaagcatgtaac
agttaatctcactgtaaacttgaagcagtttaggatcaccatgaaagcac
acctctaggtgtggctataaggtgtgtccagagaggtttatctgaggaaa
gaagtcccctctgagtgagaggcaccacaggctggcatcccagaccgtac
acagcagaagctgtgctgcagcattcatcaccctctgcatcctgactgcg
gtggcagtgtggccagcctcccttccacaatgtctccctcactgtggtgg
actgcaccgtcagacatgggccacgataaactctttttcccttacgttgg
tttatgtcgaggatttttgtcacagcatcaagaaaatgactaatagaaga
cactggcttattaagttgtgatttaaatacctgtaaaagtctataactta
ctaataagaatatacttcagttgatttgggctagacctcaaatctagatc
cctcagacaaccaggcctcagactgacagactattggcttgtagaggaag
ggtaaagagcaagtcatattttattacatttatgtttatgtttgcatgtg
tgcgtttgcatgtatatgcacacacactgtagatacacacacacatatat
atacacacatatacacactatatatagtatgtatatacattatgtataca
tattatatatacatatatatgtatatacacattatacacacacacacaca
tacgtacacatacatatatatattcagcaaaagactctgcctcaataagt
caatcgagtctgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053911_104054363
seq2: B6Ng01-020J16.b_42_492 (reverse)

seq1  CTCCATTGTGTAAATGTACCACATTTTCTGTATCTATTCCTCTGTTGAGG  50
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTCCATTGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGG  50

seq1  GGCATCTGGGTTCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCTATG  100
      |||||||||||||||||||||| ||||||||||||||||| |||||||||
seq2  GGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAATGCTGCTATG  100

seq1  AATATAGTGGAGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCTGGATA  150
      || ||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AACATAGTGGAGCATGTGTCCTTCTTACCGGTTGGGACATCTTCTGGATA  150

seq1  TATGCCCAGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATT  200
      ||||||||| ||||||||||| ||||||||||||||||||||||||||||
seq2  TATGCCCAGGAGAGGTATTGCAGGATCCTCCGGTAGTACTATGTCCAATT  200

seq1  TTCTGACGAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAA  250
      |||||| ||||| |||||| |||||||||||||||| ||||||| |||||
seq2  TTCTGAGGAACCACCAGACTGATTTCCAGAGTGGTTTTACAAGCTTGCAA  250

seq1  TCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCA  300
      ||||||||| |||||||||||||||  ||||||||||||||||| |||||
seq2  TCCCACCAAAAATGGAGGAGTGTTC--CTTTCTCCACATCCTCGTCAGCA  298

seq1  TCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGT  350
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCTGCTGTCACCTGAATTTTTGGTCTTAGCCATTCTGACTGGTGTGAGGT  348

seq1  GGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTT  400
      |||||||||| | |||||||||||||||||||||||||||||||||||||
seq2  GGAATCTCAGAGATGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTT  398

seq1  GAACATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAA  450
      ||||||||||||||||||||||| |||||| |||||||||||||||||||
seq2  GAACATTTTTTCAGGTGCTTCTCAGCCATTAGGTATTCCTCAGGTGAGAA  448

seq1  TTC  453
      |||
seq2  TTC  451

seq1: chr7_123878359_123879195
seq2: B6Ng01-020J16.g_68_903

seq1  GAATTCCAGGTGCTCAGAAGGCTGAGCAGATAGACTTTCAAGCATGTAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTGCTCAGAAGGCTGAGCAGATAGACTTTCAAGCATGTAAC  50

seq1  AGTTAATCTCACTGTAAACTTGAAGCAGTTTAGGATCACCATGAAAGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATCTCACTGTAAACTTGAAGCAGTTTAGGATCACCATGAAAGCAC  100

seq1  ACCTCTAGGTGTGGCTATAAGGTGTGTCCAGAGAGGTTTATCTGAGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTAGGTGTGGCTATAAGGTGTGTCCAGAGAGGTTTATCTGAGGAAA  150

seq1  GAAGTCCCCTCTGAGTGAGAGGCACCACAGGCTGGCATCCCAGACCGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCCCCTCTGAGTGAGAGGCACCACAGGCTGGCATCCCAGACCGTAC  200

seq1  ACAGCAGAAGCTGTGCTGCAGCATTCATCACCCTCTGCATCCTGACTGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGAAGCTGTGCTGCAGCATTCATCACCCTCTGCATCCTGACTGCG  250

seq1  GTGGCAGTGTGGCCAGCCTCCCTTCCACAATGTCTCCCTCACTGTGGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAGTGTGGCCAGCCTCCCTTCCACAATGTCTCCCTCACTGTGGTGG  300

seq1  ACTGCACCGTCAGACATGGGCCACGATAAACTCTTTTTCCCTTACGTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCACCGTCAGACATGGGCCACGATAAACTCTTTTTCCCTTACGTTGG  350

seq1  TTTATGTCGAGGATTTTTGTCACAGCATCAAGAAAATGACTAATAGAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTCGAGGATTTTTGTCACAGCATCAAGAAAATGACTAATAGAAGA  400

seq1  CACTGGCTTATTAAGTTGTGATTTAAATACCTGTAAAAGTCTATAACTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGCTTATTAAGTTGTGATTTAAATACCTGTAAAAGTCTATAACTTA  450

seq1  CTAATAAGAATATACTTCAGTTGATTTGGGCTAGACCTCAAATCTAGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAAGAATATACTTCAGTTGATTTGGGCTAGACCTCAAATCTAGATC  500

seq1  CCTCAGACAACCAGGCCTCAGACTGACAGACTATTGGCTTGTAGAGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGACAACCAGGCCTCAGACTGACAGACTATTGGCTTGTAGAGGAAG  550

seq1  GGTAAAGAGCAAGTCATATTTTATTACATTTATGTTTATGTTTGCATGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGAGCAAGTCATATTTTATTACATTTATGTTTATGTTTGCATGTG  600

seq1  TGCGTTTGCATGTATATGCACACACACTGTAGATACACACACACATATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTTTGCATGTATATGCACACACACTGTAGATACACACACACATATAT  650

seq1  ATACACACATATACACACTATATATAGTATGTATATACATTATGTATACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACATATACACACTATATATAGTATGTATATACATTATGTATACA  700

seq1  TATTATATATACATATATATGTATATACACATTATACACACACACACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATATATACATATATATGTATATACACATTATACACACACACACACA  750

seq1  TACGTACACATACATATATATATTCAGCAAAAGACTCTGCCTCAATAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTACACATACATATATATATTCAGCAAAAGACTCTGCCTCAATAAGT  800

seq1  CAATCGAGTCGTGTGTGTGTGTGTGTGTGTGTGTGTG  837
      |||||||||| ||||||||||||||||||||||||||
seq2  CAATCGAGTC-TGTGTGTGTGTGTGTGTGTGTGTGTG  836