BAC Information

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BAC

Clone NameB6Ng01-020P22
Chromosome10 (Build37)
Map Location 71,823,861 - 71,825,023
singlet/doubletsinglet
Overlap genenone
Upstream geneIpmk, LOC100039860, LOC216081, EG216082, LOC622812, EG327767, 1700049L16Rik, LOC100040505
Downstream geneZwint, LOC432471, LOC544705
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020P22.bB6Ng01-020P22.g
ACCDH853633DH853634
length1,141780
definitionDH853633|Mus musculus domesticus DNA, BAC clone: B6Ng01-020P22, 5' end.DH853634|Mus musculus domesticus DNA, BAC clone: B6Ng01-020P22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggagagataaggcacaggctttgtcatagggaaattttaccaa
gtagcaaaaatgacacataaatgctgtgctaatgtaatttattattttag
catcatctcagttaagagaccttttttttttttttcttttgagacagagt
cttataaattcttgctggcctggaactcaataactagtcaaaaatgacct
tgaacttctgttcctcctgcttcctactcctagaattatagacatgtgcc
acaatacctagcacacatgaactcaaatactttttgataagatctgaatg
tgtgaataatattaacactgtagcaaatgctaaaacttatttttatgtac
acccaacacgaacaactgtgctacattcaaatgaatggtttgcttaaggt
atcaatagatttaatgaataacatctatataccggaaatgagcttcaaca
agaaatatgcagaaatggttggcctctgagagcttaaagttaaatgcata
tttttgagccaaaattatttctacttgtgttaccactgtttgcagataag
ttagcatcctggcaagtttaaaacttaaatgggaaaataacatctgtgtt
catcttggtaatcactgtgctttcttctcagggcatcagaagagtaggtg
agatagtgatgtttcatgatttgtaaataaagcttagtccttatgaactg
tggtaaacagattgcctgagcaactacacttggaatcatgatgcaagctc
catggagatacagacaacagtatagtgataaacaggcattgtagactgcc
tgacatcaccagcatctgttgtgagctttacaggagaacttctaagatga
gtccctgccccagcaacttactttccagggtcttagacgtgaaacagatc
caaaaccaattctgccataccttgctgtaaacactatatatatgggaaac
aaccagtattttcagtgactcgggtcatcagttcatcagtagtgattaaa
cgggcattaaacgagttatttttcatgactttaggataaaggttctgaca
gaagctagagacaagaggttcactgatattggtggagcgaatcagttgtc
ataagggtcactgccagtagactctctgggattaaatgtga

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctagcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacatttcacaa
atgaactcacacaatatgtactcactgataagtggatattagcccaaaac
ctatgataccccaagatataagatacaatttttcttaacacatgaaactc
agaaaaaatgaagactgaagtgtggacactatgccccctccttagaatgg
gaactaaactccccttggaaggatttacagatacaaattttttgatctga
tatgaaaatgatggtccttgttaaatactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_71823861_71825023
seq2: B6Ng01-020P22.b_45_1185 (reverse)

seq1  TCACATTCTTAATCCCAGAGAG-CTACCTGGGGCCATGTTGTCCCTCTAT  49
      ||||||  |||||||||||||| ||| ||||   ||   || |||| |||
seq2  TCACAT--TTAATCCCAGAGAGTCTA-CTGG---CA--GTGACCCT-TAT  41

seq1  GACAAACTGTATTCGCTCCAACCATAATCCAAGTGAACCTCTTGTCTCTT  99
      ||| ||||| ||||||||| ||||  |||  ||||||||||||||||| |
seq2  GAC-AACTG-ATTCGCTCC-ACCAATATC--AGTGAACCTCTTGTCTC-T  85

seq1  AGCTGTTCCTTGTCAGATACTTTATCCTAAAGTCATGAAAAATAACTCGT  149
      |||  |||  |||||||  |||||||||||||||||||||||||||||||
seq2  AGC--TTC--TGTCAGAACCTTTATCCTAAAGTCATGAAAAATAACTCGT  131

seq1  ATAATGCCCGTTTAATCACTACTGATG-ACTGATGACCCGAGTCACTGAA  198
       |||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTAATGCCCGTTTAATCACTACTGATGAACTGATGACCCGAGTCACTGAA  181

seq1  AATACTGGTTTGTTTCCCATATTATATAGTTGTTTACAGCAAGGTATGGC  248
      |||||||| |||||||||||| ||||||| ||||||||||||||||||||
seq2  AATACTGG-TTGTTTCCCATA-TATATAG-TGTTTACAGCAAGGTATGGC  228

seq1  AGAATTGGTTTTGGATCTTGTTTCACGTCTAAGACCCTGGAAAGGTAAGT  298
      ||||||||||||||||| ||||||||||||||||||||||||| ||||||
seq2  AGAATTGGTTTTGGATC-TGTTTCACGTCTAAGACCCTGGAAA-GTAAGT  276

seq1  TGCTGGGGCAGGGACTCATCTTAGAAGTTCTCCTGTAAAGCTCACAACAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGGCAGGGACTCATCTTAGAAGTTCTCCTGTAAAGCTCACAACAG  326

seq1  ATGCTGGTGATGTCAGGCAGTCTACAATGCCTGTTTATCACTATACTGTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGTGATGTCAGGCAGTCTACAATGCCTGTTTATCACTATACTGTT  376

seq1  GTCTGTATCTCCATGGAGCTTGCATCATGATTCCAAGTGTAGTTGCTCAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTATCTCCATGGAGCTTGCATCATGATTCCAAGTGTAGTTGCTCAG  426

seq1  GCAATCTGTTTACCACAGTTCATAAGGACTAAGCTTTATTTACAAATCAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCTGTTTACCACAGTTCATAAGGACTAAGCTTTATTTACAAATCAT  476

seq1  GAAACATCACTATCTCACCTACTCTTCTGATGCCCTGAGAAGAAAGCACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATCACTATCTCACCTACTCTTCTGATGCCCTGAGAAGAAAGCACA  526

seq1  GTGATTACCAAGATGAACACAGATGTTATTTTCCCATTTAAGTTTTAAAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTACCAAGATGAACACAGATGTTATTTTCCCATTTAAGTTTTAAAC  576

seq1  TTGCCAGGATGCTAACTTATCTGCAAACAGTGGTAACACAAGTAGAAATA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAGGATGCTAACTTATCTGCAAACAGTGGTAACACAAGTAGAAATA  626

seq1  ATTTTGGCTCAAAAATATGCATTTAACTTTAAGCTCTCAGAGGCCAACCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGCTCAAAAATATGCATTTAACTTTAAGCTCTCAGAGGCCAACCA  676

seq1  TTTCTGCATATTTCTTGTTGAAGCTCATTTCCGGTATATAGATGTTATTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCATATTTCTTGTTGAAGCTCATTTCCGGTATATAGATGTTATTC  726

seq1  ATTAAATCTATTGATACCTTAAGCAAACCATTCATTTGAATGTAGCACAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATCTATTGATACCTTAAGCAAACCATTCATTTGAATGTAGCACAG  776

seq1  TTGTTCGTGTTGGGTGTACATAAAAATAAGTTTTAGCATTTGCTACAGTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCGTGTTGGGTGTACATAAAAATAAGTTTTAGCATTTGCTACAGTG  826

seq1  TTAATATTATTCACACATTCAGATCTTATCAAAAAGTATTTGAGTTCATG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATTATTCACACATTCAGATCTTATCAAAAAGTATTTGAGTTCATG  876

seq1  TGTGCTAGGTATTGTGGCACATGTCTATAATTCTAGGAGTAGGAAGCAGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTAGGTATTGTGGCACATGTCTATAATTCTAGGAGTAGGAAGCAGG  926

seq1  AGGAACAGAAGTTCAAGGTCATTTTTGACTAGTTATTGAGTTCCAGGCCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACAGAAGTTCAAGGTCATTTTTGACTAGTTATTGAGTTCCAGGCCA  976

seq1  GCAAGAATTTATAAGACTCTGTCTCAAAAGAAAAAAAAAAAAAAGGTCTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAATTTATAAGACTCTGTCTCAAAAGAAAAAAAAAAAAAAGGTCTC  1026

seq1  TTAACTGAGATGATGCTAAAATAATAAATTACATTAGCACAGCATTTATG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGAGATGATGCTAAAATAATAAATTACATTAGCACAGCATTTATG  1076

seq1  TGTCATTTTTGCTACTTGGTAAAATTTCCCTATGACAAAGCCTGTGCCTT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTTTGCTACTTGGTAAAATTTCCCTATGACAAAGCCTGTGCCTT  1126

seq1  ATCTCTCCTGAATTC  1163
      |||||||||||||||
seq2  ATCTCTCCTGAATTC  1141


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