BAC Information

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BAC

Clone NameB6Ng01-021J15
Chromosome10 (Build37)
Map Location 50,986,600 - 51,018,194
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC629652, Ascc3, Sim1, LOC268300
Downstream geneLOC100041768, Gp49a, Lilrb4, LOC669246, 9430073N08Rik, Gprc6a, Rfxdc1, 4933411G06Rik, Vgll2, Ros1, Dcbld1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021J15.bB6Ng01-021J15.g
ACCDH854060DH854061
length8471,042
definitionDH854060|Mus musculus domesticus DNA, BAC clone: B6Ng01-021J15, 5' end.DH854061|Mus musculus domesticus DNA, BAC clone: B6Ng01-021J15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,017,347 - 51,018,194)(50,986,600 - 50,987,661)
sequence
gaattcttgtgtacaaaggagttcttaatccctacagcagaattttctag
ttctatatataacagctctagggtaatatccttgctctgttatttacttc
ctagcttgtaaatttgagcaaattactatatttaatcatctttcaatttc
aatcagtgcaaaaagcacaaacacacacacatacacacacacacacagag
acacacacagctataacaggtcgatatcaaaatatatgtgtggtgcaaag
agcactcccaattattataatcagctgaaatcattactacgacactgtgt
gtacataaactacttttcttatattgcctataggcccttggcagtatata
cagactgagttatagcggatactgacatcattatcaggaaagcaatcgta
atagtctatcatatttaagaaacccagaggttctactttcacactgaaaa
ttttgtttcattatagccaatacataaaattgtaaaggaattttaatcca
gcaacatggctgttttggcaatggataacatccaaagacctcctaggtct
atgtgatccagccagatgcagacatgtcctggattacactatgatctagc
tggaacacaaaacgtgcccttagtacataccttcaatccttaaataacct
ttatagaaggaagcacccatgcagttgtccagaagacatggatgaactgg
ctacctgaaaagaaagctagaaatgaaaaggatggggtgggggaagcaag
agaagatgaagccaagacaaaggtttctgatcaaggctcaagtttaatat
ttagcacttgatttttatagggagagcccatagacccaccctttgtt
gaattcaaacttcttctttttttttctttttttcaaagttcttaaaatct
tgtaatacaaccttgcgacattacatgtttcttacaattagcttaattat
aaatcaatcaggaacatgtggattaaatttccttttctacattctcatta
gtctaatgagtgcttcagaatatttattattacttattgattttctcaat
agtaatgaagtcatggagaaaatagtaattcaaaatttagtccctttccc
cacttgttccaaacagttaataaaataatttatacagagactttaataca
taagcagagttgtaattaatgggacaaatgtgcccagtgacatgctttat
tttcaaatgtcttttatgctagtgtagtcagaagtatgaattatttcttt
gtggaaatattaacccattgtcttggtggttggaaaatattgtgcattgc
atattactatgcttctctcagcaaaacttatttatacacctacaaataga
tgtataaatacaagtatacaatgtatgtaagtatacattgcctaagtaaa
tgaaaattttcagttcatgtgaaatttcatagtgatgttttcttgtagtt
atttgcagatagatacatacatagacatgcacacacacacacacacacac
acacacacacacacacacagatacacacacattcactcataaatgaagtt
atgtaatgtattgctgtaccgcatgggaaaatgatgcaactttatttgtt
tcccctatttttctaagttacaggagcatcagttgacctattccttgagt
tccttctttattatattttctgaaacatactaagatttgactatggcaag
ggtagaaatatgcccaagatgtgcattagcttcactcatgccttggatat
aagccaatgctattgagatctgttctacagcttaatgatgcatttatgtt
cagggctcatagggatgtgtatttattgggatgaacataaatcatttgct
cgcgctcctcattagaaaaaacttgaaagaggatggtatttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_51017347_51018194
seq2: B6Ng01-021J15.b_40_886 (reverse)

seq1  AACAAAGGGTGGGTCTATGGGCTCTCCCTATATAAATACAGTGCTAAATA  50
      |||||||||||||||||||||||||||||||| ||||  |||||||||||
seq2  AACAAAGGGTGGGTCTATGGGCTCTCCCTATAAAAATCAAGTGCTAAATA  50

seq1  TTAAACTTTGAGCCTTGATCAGAAACCTTTGTCTTGGCTTCATCTTCTCT  100
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAC-TTGAGCCTTGATCAGAAACCTTTGTCTTGGCTTCATCTTCTCT  99

seq1  TGCTTCCCCCACCCCATCCTTTTTCATTTCTAGCCTTCTTTTCAGGTAGC  150
      ||||||||||||||||||| |||||||||||||| |||||||||||||||
seq2  TGCTTCCCCCACCCCATCC-TTTTCATTTCTAGCTTTCTTTTCAGGTAGC  148

seq1  CAGTTCATCCATGTCTTCTGGACAACTGCATGGGTGCTTCCTTCTATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCATCCATGTCTTCTGGACAACTGCATGGGTGCTTCCTTCTATAAA  198

seq1  GGTTATTTAAGGATTGAAGGTATGTACTAAGGGCACG-TTTGTGTTCCAG  249
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGTTATTTAAGGATTGAAGGTATGTACTAAGGGCACGTTTTGTGTTCCAG  248

seq1  CTAGATCATAGTGTAATCCAGGACATGTCTGCATCTGGCTGGATCACATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATCATAGTGTAATCCAGGACATGTCTGCATCTGGCTGGATCACATA  298

seq1  GACCTAGGAGGTCTTTGGATGTTATCCATTGCCAAAACAGCCATGTTGCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAGGAGGTCTTTGGATGTTATCCATTGCCAAAACAGCCATGTTGCT  348

seq1  GGATTAAAATTCCTTTACAATTTTATGTATTGGCTATAATGAAACAAAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAAAATTCCTTTACAATTTTATGTATTGGCTATAATGAAACAAAAT  398

seq1  TTTCAGTGTGAAAGTAGAACCTCTGGGTTTCTTAAATATGATAGACTATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTGTGAAAGTAGAACCTCTGGGTTTCTTAAATATGATAGACTATT  448

seq1  ACGATTGCTTTCCTGATAATGATGTCAGTATCCGCTATAACTCAGTCTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATTGCTTTCCTGATAATGATGTCAGTATCCGCTATAACTCAGTCTGT  498

seq1  ATATACTGCCAAGGGCCTATAGGCAATATAAGAAAAGTAGTTTATGTACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTGCCAAGGGCCTATAGGCAATATAAGAAAAGTAGTTTATGTACA  548

seq1  CACAGTGTCGTAGTAATGATTTCAGCTGATTATAATAATTGGGAGTGCTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGTCGTAGTAATGATTTCAGCTGATTATAATAATTGGGAGTGCTC  598

seq1  TTTGCACCACACATATATTTTGATATCGACCTGTTATAGCTGTGTGTGTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCACCACACATATATTTTGATATCGACCTGTTATAGCTGTGTGTGTC  648

seq1  TCTGTGTGTGTGTGTGTATGTGTGTGTGTTTGTGCTTTTTGCACTGATTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTGTGTGTGTGTATGTGTGTGTGTTTGTGCTTTTTGCACTGATTG  698

seq1  AAATTGAAAGATGATTAAATATAGTAATTTGCTCAAATTTACAAGCTAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGAAAGATGATTAAATATAGTAATTTGCTCAAATTTACAAGCTAGG  748

seq1  AAGTAAATAACAGAGCAAGGATATTACCCTAGAGCTGTTATATATAGAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAATAACAGAGCAAGGATATTACCCTAGAGCTGTTATATATAGAAC  798

seq1  TAGAAAATTCTGCTGTAGGGATTAAGAACTCCTTTGTACACAAGAATTC  848
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAATTCTGCTGTAGGGATTAAGAACTCCTTTGTACACAAGAATTC  847

seq1: chr10_50986600_50987661
seq2: B6Ng01-021J15.g_68_1109

seq1  GAATTCAAACTTCTTCTTTTTTTTTCTTTTTTTCAAAGTTCTTAAAATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACTTCTTCTTTTTTTTTCTTTTTTTCAAAGTTCTTAAAATCT  50

seq1  TGTAATACAACCTTGCGACATTACATGTTTCTTACAATTAGCTTAATTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATACAACCTTGCGACATTACATGTTTCTTACAATTAGCTTAATTAT  100

seq1  AAATCAATCAGGAACATGTGGATTAAATTTCCTTTTCTACATTCTCATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAATCAGGAACATGTGGATTAAATTTCCTTTTCTACATTCTCATTA  150

seq1  GTCTAATGAGTGCTTCAGAATATTTATTATTACTTATTGATTTTCTCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAATGAGTGCTTCAGAATATTTATTATTACTTATTGATTTTCTCAAT  200

seq1  AGTAATGAAGTCATGGAGAAAATAGTAATTCAAAATTTAGTCCCTTTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGAAGTCATGGAGAAAATAGTAATTCAAAATTTAGTCCCTTTCCC  250

seq1  CACTTGTTCCAAACAGTTAATAAAATAATTTATACAGAGACTTTAATACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTTCCAAACAGTTAATAAAATAATTTATACAGAGACTTTAATACA  300

seq1  TAAGCAGAGTTGTAATTAATGGGACAAATGTGCCCAGTGACATGCTTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAGAGTTGTAATTAATGGGACAAATGTGCCCAGTGACATGCTTTAT  350

seq1  TTTCAAATGTCTTTTATGCTAGTGTAGTCAGAAGTATGAATTATTTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAATGTCTTTTATGCTAGTGTAGTCAGAAGTATGAATTATTTCTTT  400

seq1  GTGGAAATATTAACCCATTGTCTTGGTGGTTGGAAAATATTGTGCATTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAATATTAACCCATTGTCTTGGTGGTTGGAAAATATTGTGCATTGC  450

seq1  ATATTACTATGCTTCTCTCAGCAAAACTTATTTATACACCTACAAATAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACTATGCTTCTCTCAGCAAAACTTATTTATACACCTACAAATAGA  500

seq1  TGTATAAATACAAGTATACAATGTATGTAAGTATACATTGCCTAAGTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAAATACAAGTATACAATGTATGTAAGTATACATTGCCTAAGTAAA  550

seq1  TGAAAATTTTCAGTTCATGTGAAATTTCATAGTGATGTTTTCTTGTAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATTTTCAGTTCATGTGAAATTTCATAGTGATGTTTTCTTGTAGTT  600

seq1  ATTTGCAGATAGATACATACATAGACATGCACACACACACACACACACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCAGATAGATACATACATAGACATGCACACACACACACACACACAC  650

seq1  ACACACACACACACACACAGATACACACACATTCACTCATAAATGAAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACAGATACACACACATTCACTCATAAATGAAGTT  700

seq1  ATGTAATGTATTGCTGTACCGCATGGGAAAATGATGCAACTTTATTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATGTATTGCTGTACCGCATGGGAAAATGATGCAACTTTATTTGTT  750

seq1  TCCCCTATTTTTCTAAGTTACAGGAGCATCAGTTGACCTATTCCTTGAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTATTTTTCTAAGTTACAGGAGCATCAGTTGACCTATTCCTTGAGT  800

seq1  TCCTTCTTTA-TATATTTTCTGAAACATACTAAGATGTGACTATGGCAAG  849
      |||||||||| ||||||||||||||||||||||||| |||||||||||||
seq2  TCCTTCTTTATTATATTTTCTGAAACATACTAAGATTTGACTATGGCAAG  850

seq1  GGTAGAAATATGCCC-AGATGTGGCATTAGCTTCACTCATGCCTTGGAAT  898
      ||||||||||||||| |||||| |||||||||||||||||||||||| ||
seq2  GGTAGAAATATGCCCAAGATGT-GCATTAGCTTCACTCATGCCTTGG-AT  898

seq1  ATAAGCCAATGCTATTGGAGATTCTGTTCTACAAGCTTAATGATGCATTT  948
      |||||||||||||||| |||| |||||||||| |||||||||||||||||
seq2  ATAAGCCAATGCTATT-GAGA-TCTGTTCTAC-AGCTTAATGATGCATTT  945

seq1  ATGTTCAGTGCTCATAGTGGATGTGTTATTATTTGGATGATACTATAAAT  998
      |||||||| |||||||| ||||||||  ||||| |||||| || ||||| 
seq2  ATGTTCAGGGCTCATAG-GGATGTGTATTTATTGGGATGA-AC-ATAAA-  991

seq1  TCATTTGTCTTCTGTCTGGCTCCTCTCATTAGAAAATAAACTTGAGAGGA  1048
      |||||||        || || |  |||||||||||  |||||||| ||  
seq2  TCATTTG--------CTCGCGCTCCTCATTAGAAA--AAACTTGAAAG--  1029

seq1  GGGATGTGTATTTG  1062
       ||||| |||||||
seq2  AGGATG-GTATTTG  1042