BAC Information

Click to search

BAC

Clone NameB6Ng01-022F04
Chromosome10 (Build37)
Map Location 91,621,767 - 91,756,500
singlet/doubletdoublet
Overlap geneLOC667203
Upstream geneTmpo, LOC100041769, LOC100041799
Downstream geneLOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik, EG667314, Pctk2, Elk3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022F04.bB6Ng01-022F04.g
ACCDH854575DH854576
length1,05098
definitionDH854575|Mus musculus domesticus DNA, BAC clone: B6Ng01-022F04, 5' end.DH854576|Mus musculus domesticus DNA, BAC clone: B6Ng01-022F04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,621,767 - 91,622,820)(91,756,403 - 91,756,500)
sequence
gaattcttcaaatacttcctgaaaagtaagtatttttcaaaatgtctata
gcaaactatgttcaaattcataaggtttacataattaaccatatgccata
tgttcctattcactacatgtgaccttatctttctgtctctaaggaaactc
cttgcctactaatttatttcaggatttgcatttgaactgtgaactcaatt
gtcagaaaaatgcaggatatccaaggatttatacgtgataaatgtactgt
ggctaaataatgtcaagaaacatcaagggcatcaatatgccttagagaca
ttactaaggactcggaggttctgtgtgctgtgttgtattattagaaaatc
acaaagtctagcaacttcagaaggattcaaggtcattacaagtgtataca
ggccatccaccaagaaacagatcaggagaaaagaatcacacagtcagatt
agaaacaccattaatacaatcttatgcattccaaagctaaaacatttttt
ttaaagtaagtggcagacaattaagctttgaatataacttttattttctt
aaaccattctggtatcactgatgaccccgaaattaaaatctgtgtgcaga
tcacaaacatgattaaatacaaaccagcagataaaactttatcatggatc
cttagcaaacttctagaacagttacttggatgctaatcaaagtagggatc
taggatcagtggtcaccccagaaggcccatcctctgaccgttaatattct
gcaaaacatttactaggttatattgtttagggaaagtaaactgatgtagc
ttaaggaaatacttaacacaatgactcaaggaacttgttaactgccagga
aaatgcatcctaaggatgctttgaatacaccatcccaagaccaacttgta
actttgataattcacacacaacctctaatgaaacaagtttggggctattt
ttcatcctgaactctgacacatgggttagtttaatagctcaaagtcaata
cacttttctgaagacagtaagaatatctattatcacggactaaagacaaa

caacaagcatggcaatcggtaatccaaatacgaggatgattctgaaagga
taacagagagagaatcaggtcagtcagaggggtgtgggggagggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91621767_91622820
seq2: B6Ng01-022F04.b_44_1093

seq1  GAATTCTTCAAATACTTCCTGAAAAGTAAGTATTTTTCAAAATGTCTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAAATACTTCCTGAAAAGTAAGTATTTTTCAAAATGTCTATA  50

seq1  GCAAACTATGTTCAAATTCATAAGGTTTACATAATTAACCATATGCCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACTATGTTCAAATTCATAAGGTTTACATAATTAACCATATGCCATA  100

seq1  TGTTCCTATTCACTACATGTGACCTTATCTTTCTGTCTCTAAGGAAACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTATTCACTACATGTGACCTTATCTTTCTGTCTCTAAGGAAACTC  150

seq1  CTTGCCTACTAATTTATTTCAGGATTTGCATTTGAACTGTGAACTCAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTACTAATTTATTTCAGGATTTGCATTTGAACTGTGAACTCAATT  200

seq1  GTCAGAAAAATGCAGGATATCCAAGGATTTATACGTGATAAATGTACTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAAAAATGCAGGATATCCAAGGATTTATACGTGATAAATGTACTGT  250

seq1  GGCTAAATAATGTCAAGAAACATCAAGGGCATCAATATGCCTTAGAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAATAATGTCAAGAAACATCAAGGGCATCAATATGCCTTAGAGACA  300

seq1  TTACTAAGGACTCGGAGGTTCTGTGTGCTGTGTTGTATTATTAGAAAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAAGGACTCGGAGGTTCTGTGTGCTGTGTTGTATTATTAGAAAATC  350

seq1  ACAAAGTCTAGCAACTTCAGAAGGATTCAAGGTCATTACAAGTGTATACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTCTAGCAACTTCAGAAGGATTCAAGGTCATTACAAGTGTATACA  400

seq1  GGCCATCCACCAAGAAACAGATCAGGAGAAAAGAATCACACAGTCAGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATCCACCAAGAAACAGATCAGGAGAAAAGAATCACACAGTCAGATT  450

seq1  AGAAACACCATTAATACAATCTTATGCATTCCAAAGCTAAAACATTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACACCATTAATACAATCTTATGCATTCCAAAGCTAAAACATTTTTT  500

seq1  TTAAAGTAAGTGGCAGACAATTAAGCTTTGAATATAACTTTTATTTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTAAGTGGCAGACAATTAAGCTTTGAATATAACTTTTATTTTCTT  550

seq1  AAACCATTCTGGTATCACTGATGACCCCGAAATTAAAATCTGTGTGCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATTCTGGTATCACTGATGACCCCGAAATTAAAATCTGTGTGCAGA  600

seq1  TCACAAACATGATTAAATACAAACCAGCAGATAAAACTTTATCATGGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAACATGATTAAATACAAACCAGCAGATAAAACTTTATCATGGATC  650

seq1  CTTAGCAAACTTCTAGAACAGTTACTTGGATGCTAATCAAAGTAGGGATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCAAACTTCTAGAACAGTTACTTGGATGCTAATCAAAGTAGGGATC  700

seq1  TAGGATCAGTGGTCACCCCAGAAGGCCCATCCTCTGACCGTTAATATTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATCAGTGGTCACCCCAGAAGGCCCATCCTCTGACCGTTAATATTCT  750

seq1  GCAAAACATTTACTAGGTTATATTGTTTAGGGAAAGTAAACTGATGTAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACATTTACTAGGTTATATTGTTTAGGGAAAGTAAACTGATGTAGC  800

seq1  TTAAGGAAATACTTAACACAATGACTCAAGGAACTTGTTAACTGCCAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGAAATACTTAACACAATGACTCAAGGAACTTGTTAACTGCCAGGA  850

seq1  AAATGCATCCTAAGGATGCTTTGAATACACCATCCCAAGACCAACTTGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCATCCTAAGGATGCTTTGAATACACCATCCCAAGACCAACTTGTA  900

seq1  ACTTTTGATAATTCACACACAACCTCTAATGAAACAAGTTTGGGGCTATT  950
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AC-TTTGATAATTCACACACAACCTCTAATGAAACAAGTTTGGGGCTATT  949

seq1  TTTCATCCTGAACTCTGACACATGGGTTAGTTTAATAGCTTCAAAGTCAA  1000
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTTCATCCTGAACTCTGACACATGGGTTAGTTTAATAGC-TCAAAGTCAA  998

seq1  TACACTTTTCTTGAAGACAGGTAAGAATAATCATATATCAC-GACAAAAG  1049
      |||||||||| |||||||| |||||||| |||   |||||| ||| ||||
seq2  TACACTTTTC-TGAAGACA-GTAAGAAT-ATCTATTATCACGGACTAAAG  1045

seq1  ACAAA  1054
      |||||
seq2  ACAAA  1050

seq1: chr10_91756403_91756500
seq2: B6Ng01-022F04.g_71_168 (reverse)

seq1  CTCCCCCTCCCCCACACCCCTCTGACTGACCTGATTCTCTCTCTGTTATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCTCCCCCACACCCCTCTGACTGACCTGATTCTCTCTCTGTTATC  50

seq1  CTTTCAGAATCATCCTCGTATTTGGATTACCGATTGCCATGCTTGTTG  98
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGAATCATCCTCGTATTTGGATTACCGATTGCCATGCTTGTTG  98