BAC Information

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BAC

Clone NameB6Ng01-022I03
Chromosome10 (Build37)
Map Location 115,334,022 - 115,444,315
singlet/doubletdoublet
Overlap genenone
Upstream geneTph2, Tbc1d15, LOC668041, Rab21, Tmem19, Thap2, Ccdc131, Lgr5, A930009A15Rik, LOC668071, EG668073, Tspan8
Downstream genePtprr, 4933416C03Rik, Ptprb, Kcnmb4, Cnot2, LOC668080, EG668091, Gm239, Rab3ip, D630029K05Rik, LOC544741, Best3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022I03.bB6Ng01-022I03.g
ACCDH854699DH854700
length208950
definitionDH854699|Mus musculus domesticus DNA, BAC clone: B6Ng01-022I03, 5' end.DH854700|Mus musculus domesticus DNA, BAC clone: B6Ng01-022I03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,444,108 - 115,444,315)(115,334,022 - 115,334,971)
sequence
gaattctctatatctggcgacaaatatgtgcagtgtcttcagcaacagtg
tctcatcggttgtctctggtggacaaccaaaaggaaggtgaggcctttgg
gatctctccgacaagtcagaaggaagtcttttacacctggtactggagtt
ttgtttaataacccctggctttcagaatcggcatattctctctctccccc
tccctccc
gaattcagatggttgtgattcatgagataatgataaagtccctcaggttg
tgcaaggcagctctgcagtgacatcagccttggatgtctcagtgcaaaga
ggcttccatatgagaggaaggggattatggtgtctggcatcaaaggaccc
aagatggttctaggtatgaggtgcatcattaagggcagtaagaaaaagaa
tggggaggcaaagggtagaggggagaatgtgagggtcccatcagtcttca
ggaaagaggattgtggagagagcaagtgatgctgtccagagctgagaacg
ggtggctgtctcccagccccatgtgctatttgtcctgggacagactgaga
gaacatggcctgccttgttaagggaagtggttccacacggctgctgagtc
tatgctaggagtggaaagttatatcacatctgtactggtttttaatctct
gtttggttttgtttgttcaagttaatgaaaatgatgtgctattgttatgt
agcggtgccagaagagaatttcaccacagacttcagaaatgtctttgggt
ccgtgcccatttcgtgtggtttcactttcccccattttccttcctcctgc
cctttcactccttccccctgaagcactgctctcatgcagacggattaatc
gcatgtgaaggaaggctatttgaagacagttcagccaagtggggcaagcc
agcgtccagagatacagtggcatagccaggagggaaaggtggatgggacc
tagctgcagaaccattctgatggaggcataattaacgggtctttcaaatt
catagctggagctgaggaatgacgatgaatacacccccatctggggaata
ttaacagtatttataaactcctcatggaaagacgatgtcctcacttttct
tagccagtcccctgggcaccatagagaagcttcgagtctttcagtattta

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_115444108_115444315
seq2: B6Ng01-022I03.b_43_250 (reverse)

seq1  GGGAGGGAGGGGGAGAGAGAGAATATGCCGATTCTGAAAGCCAGGGGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGAGGGGGAGAGAGAGAATATGCCGATTCTGAAAGCCAGGGGTTA  50

seq1  TTAAACAAAACTCCAGTACCAGGTGTAAAAGACTTCCTTCTGACTTGTCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAAAACTCCAGTACCAGGTGTAAAAGACTTCCTTCTGACTTGTCG  100

seq1  GAGAGATCCCAAAGGCCTCACCTTCCTTTTGGTTGTCCACCAGAGACAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATCCCAAAGGCCTCACCTTCCTTTTGGTTGTCCACCAGAGACAAC  150

seq1  CGATGAGACACTGTTGCTGAAGACACTACACATATTTGTCGCCAGATATA  200
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CGATGAGACACTGTTGCTGAAGACACTGCACATATTTGTCGCCAGATATA  200

seq1  GAGAATTC  208
      ||||||||
seq2  GAGAATTC  208

seq1: chr10_115334022_115334971
seq2: B6Ng01-022I03.g_70_1019

seq1  GAATTCAGATGGTTGTGATTCATGAGATAATGATAAAGTCCCTCAGGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATGGTTGTGATTCATGAGATAATGATAAAGTCCCTCAGGTTG  50

seq1  TGCAAGGCAGCTCTGCAGTGACATCAGCCTTGGATGTCTCAGTGCAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGGCAGCTCTGCAGTGACATCAGCCTTGGATGTCTCAGTGCAAAGA  100

seq1  GGCTTCCATATGAGAGGAAGGGGATTATGGTGTCTGGCATCAAAGGACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCCATATGAGAGGAAGGGGATTATGGTGTCTGGCATCAAAGGACCC  150

seq1  AAGATGGTTCTAGGTATGAGGTGCATCATTAAGGGCAGTAAGAAAAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGTTCTAGGTATGAGGTGCATCATTAAGGGCAGTAAGAAAAAGAA  200

seq1  TGGGGAGGCAAAGGGTAGAGGGGAGAATGTGAGGGTCCCATCAGTCTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGGCAAAGGGTAGAGGGGAGAATGTGAGGGTCCCATCAGTCTTCA  250

seq1  GGAAAGAGGATTGTGGAGAGAGCAAGTGATGCTGTCCAGAGCTGAGAACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAGGATTGTGGAGAGAGCAAGTGATGCTGTCCAGAGCTGAGAACG  300

seq1  GGTGGCTGTCTCCCAGCCCCATGTGCTATTTGTCCTGGGACAGACTGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTGTCTCCCAGCCCCATGTGCTATTTGTCCTGGGACAGACTGAGA  350

seq1  GAACATGGCCTGCCTTGTTAAGGGAAGTGGTTCCACACGGCTGCTGAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGGCCTGCCTTGTTAAGGGAAGTGGTTCCACACGGCTGCTGAGTC  400

seq1  TATGCTAGGAGTGGAAAGTTATATCACATCTGTACTGGTTTTTAATCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTAGGAGTGGAAAGTTATATCACATCTGTACTGGTTTTTAATCTCT  450

seq1  GTTTGGTTTTGTTTGTTCAAGTTAATGAAAATGATGTGCTATTGTTATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTTTTGTTTGTTCAAGTTAATGAAAATGATGTGCTATTGTTATGT  500

seq1  AGCGGTGCCAGAAGAGAATTTCACCACAGACTTCAGAAATGTCTTTGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGTGCCAGAAGAGAATTTCACCACAGACTTCAGAAATGTCTTTGGGT  550

seq1  CCGTGCCCATTTCGTGTGGTTTCACTTTCCCCCATTTTCCTTCCTCCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGCCCATTTCGTGTGGTTTCACTTTCCCCCATTTTCCTTCCTCCTGC  600

seq1  CCTTTCACTCCTTCCCCCTGAAGCACTGCTCTCATGCAGACGGATTAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCACTCCTTCCCCCTGAAGCACTGCTCTCATGCAGACGGATTAATC  650

seq1  GCATGTGAAGGAAGGCTATTTGAAGACAGTTCAGCCAAGT-GGGCAAGCC  699
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GCATGTGAAGGAAGGCTATTTGAAGACAGTTCAGCCAAGTGGGGCAAGCC  700

seq1  AGCGTCCAGAGATACAGTGGCATAGCCAGGAGGGAAAGGTGGAT-GGACC  748
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGCGTCCAGAGATACAGTGGCATAGCCAGGAGGGAAAGGTGGATGGGACC  750

seq1  TAGCTGCAGAACCA-TCTGATGGAGGCATAATTAACGGGTC-TTCAAATT  796
      |||||||||||||| |||||||||||||||||||||||||| ||||||||
seq2  TAGCTGCAGAACCATTCTGATGGAGGCATAATTAACGGGTCTTTCAAATT  800

seq1  CATAGCTGGAGCTGAGGAATGACGATGAATACACCCCCATCTGGGAATAA  846
      ||||||||||||||||||||||||||||||||||||||||||||| |  |
seq2  CATAGCTGGAGCTGAGGAATGACGATGAATACACCCCCATCTGGGGAATA  850

seq1  TTAACAGTAATTTATAAACTCCTCATGGAAAAGAACGATGTCTTCACCTT  896
      |||||||| ||||||||||||||||||||||   |||||||| |||| ||
seq2  TTAACAGT-ATTTATAAACTCCTCATGGAAA--GACGATGTCCTCACTTT  897

seq1  TCTTAGCCAGTCCCCTGGGCACCATAGAGGATGCTTCGAGTCTTTCAGTA  946
      |||||||||||||||||||||||||||| || ||||||||||||||||||
seq2  TCTTAGCCAGTCCCCTGGGCACCATAGA-GAAGCTTCGAGTCTTTCAGTA  946

seq1  TTTA  950
      ||||
seq2  TTTA  950