BAC Information

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BAC

Clone NameB6Ng01-022M05
Chromosome10 (Build37)14 (Build37)
Map Location 104,053,903 - 104,054,36354,090,364 - 54,090,923
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022M05.bB6Ng01-022M05.g
ACCDH854878DH854879
length949554
definitionDH854878|Mus musculus domesticus DNA, BAC clone: B6Ng01-022M05, 5' end.DH854879|Mus musculus domesticus DNA, BAC clone: B6Ng01-022M05, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,363)(54,090,364 - 54,090,923)
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctaaaaaaaaa
tgttgagcatccttaatcattagggaaatgcaaatcaaagccaccctgag
attccacctcataccagacagaatggctaacatcaaaaattcaggtgaca
gcagatgctggagaggatgtggagaaagagcaatactcttccattgttgg
tgggattgcaagctggtataaccactctggaaatcagtctggcagttctt
cagaaaatttgaaatagatatactggaggatctctcaatacctctcctgg
gcatatatccagaatattttccaactggtaggaaggacacatgctccact
atgttcatggcagccttatttataatagccagaaggtggaaagaacccag
atgcccctcaacagaggagaggaatggatacagaaaatgtggtacattta
cataatggagtactactcagctattaaaaagaatgaatttatgaaattcc
taggcaaatggatagacctggaaggcatgatcctgattcaggtaacccaa
tcacaaaagaactcacataatatgtactcactgataagtggatattagcc
cagaaacttagaatactgaagatacaagatacaatttgcaaaacacatga
aactcaagaagaacgaagaccaaagtgtggacactttgccccttcttaga
attaggaacaaaacacctgtggaaggagctacagagacaaagtttggagc
tgacaggaaaggatggaccatctagagactgccatatccagggatccatc
ccataatcagcctcccaatgatgacaccattgcatacattagcaagattt
tgctgaaaggaccctgatataggtgtctctgtgagctatgccggggccta
acaaacacagaagtggatgctcactgtcagctatttgatggatcacagg
tttccaataatttgaaaataatacagaaatgattctcaaagccatcttgg
tctaaaaagcactgttaaaaaatagaataattttccttataatcgcgtta
ctagattattatgaacaataaataataatgtttcagaaaagtaagccttc
aagtgcagttttcttgcacgaccccccagcactagaatcctgctgctccc
tatcctagctgtatctttgtgattcagatacggtaagttctgtagaccta
tgtatgtgaacagagaatgaaactgagaagaatctgtcttctggcttaaa
cagaggtttattgtccatgataccacttggaaggaggctcagaatgcagg
ggaatgactggtttacagagaacagatgacaaggacgcttctgtccttat
tctaaagaccacagcttcgatgcagatgtctaagaaggcacagtgatctt
caagcttagatggagcgctgtatagagagcattcttcctttgatattgtg
gatataagcctttctgttttgttttatgttttggtgtgtgtagggagggg
ggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-022M05.b_41_518 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          ||||||| ||||||||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCATTATGTAAATGTACCACATTTTCTGTA  50

seq1  TCTAT-----TCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGG  85
      || ||     |||||||||||||||||||||||||||||||| || ||||
seq2  TCCATTCCTCTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCACCTTCTGG  100

seq1  CTATTATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTA  135
      ||||||||||||||||||| ||||| ||||||||||||||||||||| ||
seq2  CTATTATAAATAAGGCTGCCATGAACATAGTGGAGCATGTGTCCTTCCTA  150

seq1  CCGGTTGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATC  185
      || |||||   || |||||||||||||||||| ||||||||||   ||||
seq2  CCAGTTGGAAAATATTCTGGATATATGCCCAGGAGAGGTATTGAGAGATC  200

seq1  CTCCGGTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCC  235
      |||| |||   |||| || |||||||||| |||| ||||||| |||||||
seq2  CTCCAGTATATCTATTTCAAATTTTCTGAAGAACTGCCAGACTGATTTCC  250

seq1  AGAGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCT  285
      ||||||||| ||| ||| ||||||||||||||||||||| |||| || ||
seq2  AGAGTGGTTATACCAGCTTGCAATCCCACCAACAATGGAAGAGTATTGCT  300

seq1  CTTTCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTT  335
      |||||||||||||||| |||||||||||||||||||||||||||||| ||
seq2  CTTTCTCCACATCCTCTCCAGCATCTGCTGTCACCTGAATTTTTGATGTT  350

seq1  AGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCA  385
      |||||||||| ||||| ||||||||||||||||||| | |||||||||||
seq2  AGCCATTCTGTCTGGTATGAGGTGGAATCTCAGGGTGGCTTTGATTTGCA  400

seq1  TTTCCCTGATGATTAAGGATGTTGAACA--TTTTTTCAGGTGCTTCTCTG  433
      ||||||| ||||||||||||| | ||||  |||||| |||||||||||||
seq2  TTTCCCTAATGATTAAGGATGCTCAACATTTTTTTTTAGGTGCTTCTCTG  450

seq1  CCATTCGGTATTCCTCAGGTGAGAATTC  461
      ||||||||||||||||||||||||||||
seq2  CCATTCGGTATTCCTCAGGTGAGAATTC  478

seq1: chr14_54090364_54090923
seq2: B6Ng01-022M05.g_67_626 (reverse)

seq1  CTCCCCCCTCCCTACACACACCAAAACATAAAACAAAACAGAAAGGCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCCTCCCTACACACACCAAAACATAAAACAAAACAGAAAGGCTTA  50

seq1  TATCCACAATATCAAAGGAAGAATGCTCTCTATACAGCGCTCCATCTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCACAATATCAAAGGAAGAATGCTCTCTATACAGCGCTCCATCTAAG  100

seq1  CTTGAAGATCACTGTGCCTTCTTAGACATCTGCATCGAAGCTGTGGTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGATCACTGTGCCTTCTTAGACATCTGCATCGAAGCTGTGGTCTT  150

seq1  TAGAATAAGGACAGAAGCGTCCTTGTCATCTGTTCTCTGTAAACCAGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATAAGGACAGAAGCGTCCTTGTCATCTGTTCTCTGTAAACCAGTCA  200

seq1  TTCCCCTGCATTCTGAGCCTCCTTCCAAGTGGTATCATGGACAATAAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTGCATTCTGAGCCTCCTTCCAAGTGGTATCATGGACAATAAACC  250

seq1  TCTGTTTAAGCCAGAAGACAGATTCTTCTCAGTTTCATTCTCTGTTCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTAAGCCAGAAGACAGATTCTTCTCAGTTTCATTCTCTGTTCACA  300

seq1  TACATAGGTCTACAGAACTTACCGTATCTGAATCACAAAGATACAGCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGGTCTACAGAACTTACCGTATCTGAATCACAAAGATACAGCTAG  350

seq1  GATAGGGAGCAGCAGGATTCTAGTGCTGGGGGGTCGTGCAAGAAAACTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGGAGCAGCAGGATTCTAGTGCTGGGGGGTCGTGCAAGAAAACTGC  400

seq1  ACTTGAAGGCTTACTTTTCTGAAACATTATTATTTATTGTTCATAATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAGGCTTACTTTTCTGAAACATTATTATTTATTGTTCATAATAAT  450

seq1  CTAGTAACGCGATTATAAGGAAAATTATTCTATTTTTTAACAGTGCTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAACGCGATTATAAGGAAAATTATTCTATTTTTTAACAGTGCTTTT  500

seq1  TAGACCAAGATGGCTTTGAGAATCATTTCTGTATTATTTTCAAATTATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCAAGATGGCTTTGAGAATCATTTCTGTATTATTTTCAAATTATTG  550

seq1  GAAAGAATTC  560
      ||||||||||
seq2  GAAAGAATTC  560