BAC Information

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BAC

Clone NameB6Ng01-022N12
Chromosome10 (Build37)
Map Location 75,988,836 - 76,107,765
singlet/doubletdoublet
Overlap geneLss, 1700027D21Rik, Ftcd, Col6a2
Upstream geneSnrpd3, AI646023, Ggt1, Ggtla1, Susd2, Cabin1, Ddt, Gstt3, Gstt1, Gstt4, Gstt2, Mif, Derl3, Smarcb1, Mmp11, Ndg2, Gm867, Vpreb3, EG333669, Suhw2, Slc5a4b, Slc5a4a, LOC100040150, Prmt2, S100b, Dip2a, Pcnt, 2610028H24Rik, A130042E20Rik, Mcm3ap
Downstream geneCol6a1, Pcbp3, LOC100041099, Slc19a1, Col18a1, LOC665762, Pofut2, Adarb1, 1810008A18Rik, Itgb2, Pttg1ip, Sumo3, Ube2g2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022N12.bB6Ng01-022N12.g
ACCDH854936DH854937
length1,041374
definitionDH854936|Mus musculus domesticus DNA, BAC clone: B6Ng01-022N12, 5' end.DH854937|Mus musculus domesticus DNA, BAC clone: B6Ng01-022N12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,106,712 - 76,107,765)(75,988,836 - 75,989,209)
sequence
gaattcccctcagaaaatcatgtcctttgaattatggcagtagctcaccc
actatgcccttctcagggccctttgagaatcatgggaatctaattccagg
actctagaggagacatgaaccccactagagatcaatgagtgtcaacaagg
ctgatcagcagttctcagccctgacccccatggtcacaacagtctctcca
tgacaaacatggatcctactctcatgggccacaggacccacagagggcca
attttgctcaagaactcctacctgtctgttggaaccatttctgctcctga
gttcagtccccatcccttgtgcccctgtggctccttgctccctaactttc
ccagacatacctagtctgggttaacacctgcttctctaagagctgatata
atgcctcatctcttcctattggacagcatcttttttttttaattcaagtc
acatgatttttccttctcttatacttttggaggaagactctgccccagtg
gctcgatgcctatgctcaacttggaactgaggaggtgcctgtctgggact
agagggatctctcatctgtattccttcacaggctgatgaaaagggattca
ccctaaggtatgtgactagtgggagatgccacaggagtggaacccagcag
actggaaggagaaggaaccacaagcaagggctgctggcccaggaagagtc
ctgggttctcccagtgctaccgcctctatacagatgcagcgatctggggt
ctcaccaccaccaagaccctgactgtatctcctgggccagcggcagacat
ccctcagctggccctgcctagtgtatcatttgtacaaaggctggactctc
tgggccagggcccagctttcctggcttctgtcctgagtacattttttaag
agggtggggatttctagtcagatgtatttgaaaggttctgggatgggaga
ttagggacatctttcaaattactattcgtctgaacctctcccccagactt
aatgtgagctatagggccctgaaaataatttgatgcgctcc
agttcaggctgactttgtttcctcatagcagctgaatctgttactgagtc
atgactttatttcactctggtgcaattttggctctccctgccttgtttta
ttctatgttcttgccactacttcactcaaaactctcagtacatccaacac
agccttgtttgtaaggtagagttctagttccgttttctcatgacaaccct
ttgggaaccatatctctctgtaacggcttttgcatccagaatgtctttat
ttctccttatatttgattcaatatttcagtgagagtaacattttagattg
gcaattattaccttttagtcttctttctttctttctttcttttttttttt
ttttttggttttttgagacagggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_76106712_76107765
seq2: B6Ng01-022N12.b_47_1087 (reverse)

seq1  GGAGCGCATACAAAATTAATTTACAGGGCCCTGTAGCTCACAATTAAGTC  50
      ||||||||| ||||  | |||| ||||||||| |||||||| ||||||||
seq2  GGAGCGCAT-CAAA--TTATTTTCAGGGCCCTATAGCTCAC-ATTAAGTC  46

seq1  TGGGGGAGAGAGTTTCAGACGAAATAGTTATTTGGAAAGATGTCCCTAAA  100
      |||||  ||||| |||||||| |||||| |||| ||||||||||||| ||
seq2  TGGGG--GAGAGGTTCAGACG-AATAGTAATTT-GAAAGATGTCCCT-AA  91

seq1  TCTCCCATCCCAGAACCCTTTCAAATACATCTGGACTAGAAATTCCCCAC  150
      ||||||||||||||| |||||||||||||||| ||||||||| |||||||
seq2  TCTCCCATCCCAGAA-CCTTTCAAATACATCT-GACTAGAAA-TCCCCAC  138

seq1  CCTCTTAAAAAATGTACTCAGGACAGAAGCCAGGGAAAGCTGGGCCCTGG  200
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CCTCTTAAAAAATGTACTCAGGACAGAAGCCA-GGAAAGCTGGGCCCTGG  187

seq1  CCCAGAGAGTCCAGCCTTTGTACAAATGATACACTAGGCAGGGCCAGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGAGTCCAGCCTTTGTACAAATGATACACTAGGCAGGGCCAGCTG  237

seq1  AGGGATGTCTGCCGCTGGCCCAGGAGATACAGTCAGGGTCTTGGTGGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATGTCTGCCGCTGGCCCAGGAGATACAGTCAGGGTCTTGGTGGTGG  287

seq1  TGAGACCCCAGATCGCTGCATCTGTATAGAGGCGGTAGCACTGGGAGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACCCCAGATCGCTGCATCTGTATAGAGGCGGTAGCACTGGGAGAAC  337

seq1  CCAGGACTCTTCCTGGGCCAGCAGCCCTTGCTTGTGGTTCCTTCTCCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACTCTTCCTGGGCCAGCAGCCCTTGCTTGTGGTTCCTTCTCCTTC  387

seq1  CAGTCTGCTGGGTTCCACTCCTGTGGCATCTCCCACTAGTCACATACCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTGCTGGGTTCCACTCCTGTGGCATCTCCCACTAGTCACATACCTT  437

seq1  AGGGTGAATCCCTTTTCATCAGCCTGTGAAGGAATACAGATGAGAGATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGAATCCCTTTTCATCAGCCTGTGAAGGAATACAGATGAGAGATCC  487

seq1  CTCTAGTCCCAGACAGGCACCTCCTCAGTTCCAAGTTGAGCATAGGCATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGTCCCAGACAGGCACCTCCTCAGTTCCAAGTTGAGCATAGGCATC  537

seq1  GAGCCACTGGGGCAGAGTCTTCCTCCAAAAGTATAAGAGAAGGAAAAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCACTGGGGCAGAGTCTTCCTCCAAAAGTATAAGAGAAGGAAAAATC  587

seq1  ATGTGACTTGAATTAAAAAAAAAAGATGCTGTCCAATAGGAAGAGATGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACTTGAATTAAAAAAAAAAGATGCTGTCCAATAGGAAGAGATGAG  637

seq1  GCATTATATCAGCTCTTAGAGAAGCAGGTGTTAACCCAGACTAGGTATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTATATCAGCTCTTAGAGAAGCAGGTGTTAACCCAGACTAGGTATGT  687

seq1  CTGGGAAAGTTAGGGAGCAAGGAGCCACAGGGGCACAAGGGATGGGGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAAGTTAGGGAGCAAGGAGCCACAGGGGCACAAGGGATGGGGACT  737

seq1  GAACTCAGGAGCAGAAATGGTTCCAACAGACAGGTAGGAGTTCTTGAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGGAGCAGAAATGGTTCCAACAGACAGGTAGGAGTTCTTGAGCA  787

seq1  AAATTGGCCCTCTGTGGGTCCTGTGGCCCATGAGAGTAGGATCCATGTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGCCCTCTGTGGGTCCTGTGGCCCATGAGAGTAGGATCCATGTTT  837

seq1  GTCATGGAGAGACTGTTGTGACCATGGGGGTCAGGGCTGAGAACTGCTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGGAGAGACTGTTGTGACCATGGGGGTCAGGGCTGAGAACTGCTGA  887

seq1  TCAGCCTTGTTGACACTCATTGATCTCTAGTGGGGTTCATGTCTCCTCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTTGTTGACACTCATTGATCTCTAGTGGGGTTCATGTCTCCTCTA  937

seq1  GAGTCCTGGAATTAGATTCCCATGATTCTCAAAGGGCCCTGAGAAGGGCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCTGGAATTAGATTCCCATGATTCTCAAAGGGCCCTGAGAAGGGCA  987

seq1  TAGTGGGTGAGCTACTGCCATAATTCAAAGGACATGATTTTCTGAGGGGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGGTGAGCTACTGCCATAATTCAAAGGACATGATTTTCTGAGGGGA  1037

seq1  ATTC  1054
      ||||
seq2  ATTC  1041

seq1: chr10_75988836_75989209
seq2: B6Ng01-022N12.g_76_449

seq1  AGTTCAGGCTGACTTTGTTTCCTCATAGCAGCTGAATCTGTTACTGAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAGGCTGACTTTGTTTCCTCATAGCAGCTGAATCTGTTACTGAGTC  50

seq1  ATGACTTTATTTCACTCTGGTGCAATTTTGGCTCTCCCTGCCTTGTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTTATTTCACTCTGGTGCAATTTTGGCTCTCCCTGCCTTGTTTTA  100

seq1  TTCTATGTTCTTGCCACTACTTCACTCAAAACTCTCAGTACATCCAACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGTTCTTGCCACTACTTCACTCAAAACTCTCAGTACATCCAACAC  150

seq1  AGCCTTGTTTGTAAGGTAGAGTTCTAGTTCCGTTTTCTCATGACAACCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGTTTGTAAGGTAGAGTTCTAGTTCCGTTTTCTCATGACAACCCT  200

seq1  TTGGGAACCATATCTCTCTGTAACGGCTTTTGCATCCAGAATGTCTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAACCATATCTCTCTGTAACGGCTTTTGCATCCAGAATGTCTTTAT  250

seq1  TTCTCCTTATATTTGATTCAATATTTCAGTGAGAGTAACATTTTAGATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTTATATTTGATTCAATATTTCAGTGAGAGTAACATTTTAGATTG  300

seq1  GCAATTATTACCTTTTAGTCTTCTTTCTTTCTTTCTTTCTTTTTTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTATTACCTTTTAGTCTTCTTTCTTTCTTTCTTTCTTTTTTTTTTT  350

seq1  TTTTTTGGTTTTTTGAGACAGGGT  374
      ||||||||||||||||||||||||
seq2  TTTTTTGGTTTTTTGAGACAGGGT  374