BAC Information

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BAC

Clone NameB6Ng01-024B20
Chromosome10 (Build37)
Map Location 104,053,551 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024B20.bB6Ng01-024B20.g
ACCDH855845DH855846
length9961,112
definitionDH855845|Mus musculus domesticus DNA, BAC clone: B6Ng01-024B20, 5' end.DH855846|Mus musculus domesticus DNA, BAC clone: B6Ng01-024B20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcaaaccaatcagaatggctaagatcaaaaattcaggtgacagc
agatgctggagaggatgtggagaaagaggaacattcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttccttg
gaaaattggacatggtactaccggaggatccagcaatacctctcctggac
atatatccagaagatgtccccatcggtaagaaggacacatgttccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccttcaacagaggaatagatacagaaaatgtggtacatttttttttta
agatttatttattggttatctgtaagtacactgtagctgacttcagacac
gccagaagagggagtcagatctcgttacagatggttgtgagccaccatgc
agttgctgggatttgaactccggaccttcagaagagcagtcgggtgctct
tacccactgagccatctcaccagcccacatttacacaatggagtactact
cagctattaaaaagaatgaatttatgaaattcctagccaaatggatggac
ctggagggcatcatcctgagtaaagtaacacaatcacaaaggaactcaca
caatatatactcactgataagtggatattagcccaaaacttaggataccc
aagatataagatacaatttgctaaatacatgaaactcaagaagaatgaag
cctgaagtgtgtacaccatgcccctccttagaattgggaacaaatcaccc
atggaaggagttatagagtaatatatctttatagcatttttaaagtaatt
aattcttttttaaaaaagacttatttattattatatgaaagtacac

gaattctcttggatcaccgcaaaattaacccatgtagcccacttcagtac
atgattctttctccataaatttatgggcatgtgatcaatgtaaaggttta
actttcatatttgactttttgctccctcacctttagctcttcactttgtt
ttatctgtgatgactttcgcctttcaaataacttagtatcctctttttaa
tgtgactgttgtgagttacaaggtttctgtaaaatcaatgttacataaac
tcctgttttccccaagcagcctatttcgataatttgtacttgaaagtgaa
ttatgacctctgatctttaacaactgaaaattaacatattttccagtact
tccaaattgtcttgtactttctgagcagcgttttcctagagatagacata
cagtagcatctgggcaactccactaattgcatttaattctatctttattg
attcacagagcatgagattaaattctcttttgaaatcttcattgatcata
ccttgattcacactggaaagttgaagaatcctttgagttgtatcattcag
tatattttctgcttctgtgagtaaatgacaataaagtcaatgggttattt
tcataacattgaggctatgtggattagagtaagatgtttatctattccca
actctagaaaagcactgcattcagtagcatgcattggattcatattactt
cattgagatatttctgcctgcttattctttcctaattcacaagaggcaat
ttttctgtactttttgttatttgttatacagcttgggtttgatttcattt
tctgatggcaaaaaatggcctttggctatctctcttggacctacagtcat
tgttccaatggtatatgtagtttcctcaaataaacacaactataacagta
gctttcattttattcatacctaggaaatgactgtccttagagatgcctgt
acattatgctgaaactgatcaaattctcacataaatgcacagattttttg
agactgagactataacagctgtcacaggttctttgtgtattaccatatct
gcactggatcaaagtatttgacaccagcatcacagtttaggatgaagtgg
tgtacagcatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053551_104054363
seq2: B6Ng01-024B20.b_31_820 (reverse)

seq1  AGTTTCTGGGCTAATATCCACTTATCAGTGAGTACATATTGCGCGAGTTC  50
      ||||| |||||||||||||||||||||||||||| |||||| | ||||||
seq2  AGTTT-TGGGCTAATATCCACTTATCAGTGAGTATATATTGTGTGAGTTC  49

seq1  CTTTGTGATTGGGTTACCGCACTCAGGATGATACTCTCCAGGTCCATCCA  100
      ||||||||||| |||||   |||||||||||| | |||||||||||||||
seq2  CTTTGTGATTGTGTTACTTTACTCAGGATGATGCCCTCCAGGTCCATCCA  99

seq1  TTTGCCTAGGAATTTCATAAATTCATTCTTTTTAATAGCTCCATTTACAT  150
      |||| |||||||||||||||||||||||||||||||||||  | |   | 
seq2  TTTGGCTAGGAATTTCATAAATTCATTCTTTTTAATAGCT-GAGTAGTAC  148

seq1  TTAATTTAATTAATGTAATTACAATTAATTAATTTATTAATTAAATAATT  200
      |  |||   | ||||                 |    |  | | ||   |
seq2  TCCATTGTGTAAATG-----------------TGGGCTGGTGAGATGGCT  181

seq1  TAATAATTTAATTGATAAATTAATTTAATTAATTAATTTAATTAATTAAA  250
       | |   | |   ||  |    | |    |  | ||  |    | || ||
seq2  CAGTGGGTAA---GAGCACCCGACTGCTCTTCTGAAGGTCCGGAGTTCAA  228

seq1  TTAAATAATAATTTAATAATAAATTAAATATTTTAAAATTAATAATAATT  300
       |    |  || |  ||  |   | | |      |  ||   |||  |  
seq2  AT-CCCAGCAACTGCATGGTGGCTCACA------ACCATCTGTAACGA-G  270

seq1  TTATAAGTAAATAAT-----TTAATTAATGTAATTTAATTAATGTAATTA  345
       | | | |   |  |      |   | | || |  ||   | |||| |||
seq2  ATCTGACTCCCTCTTCTGGCGTGTCTGAAGTCAGCTA--CAGTGTACTTA  318

seq1  C--ATTA-CATTTAATAGCTC-CATTGTGTAAATGTACCACATTTTCTGT  391
      |  || | || | ||||  ||  |      ||||||||||||||||||||
seq2  CAGATAACCAATAAATAAATCTTAAAAAAAAAATGTACCACATTTTCTGT  368

seq1  ATCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTAT  441
      ||||||||||||||||| ||||||||||||||||||||||| ||||||||
seq2  ATCTATTCCTCTGTTGAAGGGCATCTGGGTTCTTTCCAGCTTCTGGCTAT  418

seq1  TATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGG  491
      ||||||||||||||||||||| |||||||| |||||||||||||||||| 
seq2  TATAAATAAGGCTGCTATGAACATAGTGGAACATGTGTCCTTCTTACCGA  468

seq1  TTGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCC  541
      | ||| ||||||||||||||||| |||| |||||||||||||||||||||
seq2  TGGGGACATCTTCTGGATATATGTCCAGGAGAGGTATTGCTGGATCCTCC  518

seq1  GGTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAG  591
      |||||||| |||||||||||||  | |||||||||||| |||||||||||
seq2  GGTAGTACCATGTCCAATTTTCCAAGGAACCGCCAGACTGATTTCCAGAG  568

seq1  TGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTT  641
      ||||||||||||| |||||||||||||||||||||||| |||||||||||
seq2  TGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAATGTTCCTCTTT  618

seq1  CTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCC  691
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTCCACATCCTCTCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCC  668

seq1  ATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTC  741
      ||||||| |||| |||||||||||||||||||||||||||||||||||||
seq2  ATTCTGATTGGTTTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTC  718

seq1  CCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTC  768

seq1  GGTATTCCTCAGGTGAGAATTC  813
      ||||||||||||||||||||||
seq2  GGTATTCCTCAGGTGAGAATTC  790


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