BAC Information

Click to search

BAC

Clone NameB6Ng01-024E18
Chromosome10 (Build37)
Map Location 72,695,859 - 72,696,538
singlet/doubletsinglet
Overlap geneLOC432471
Upstream geneLOC100040505, Zwint, LOC544705
Downstream geneLOC100039981, LOC623191, Pcdh15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024E18.bB6Ng01-024E18.g
ACCDH855973DH855974
length681894
definitionDH855973|Mus musculus domesticus DNA, BAC clone: B6Ng01-024E18, 5' end.DH855974|Mus musculus domesticus DNA, BAC clone: B6Ng01-024E18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ctgccctcactgcttttgatggtgaactgttgtatagaactttgaacaaa
ataagccctttcctccctcagttgcttttgctcatggtgtttcatcacag
caatagtaacctgaattaatgtactttcctagtgactcagaataaaaaaa
atgtaatgggatggatgaattatctagggaggtagtgagcttatactcat
aatcactggtgtggcagatttatggagacttgtcacagcaatgttttttt
ttttttcagtgccatctcaaaggaacgctgtttgctgtgcttttatggtg
gcatgttgagttgagatttgtgtagttacttcactagacaagttgtaatc
ttaagggttgatcatatcaatcaaagtggcaggtgtgtagagtgcagtaa
gcagattcctgattgattgattaagttttcaactgctttgaacaggtggc
aaacagatatgaccctagactgcaattggtgcaaaaacactagttgattt
ttaaagatcccgatctagggacaatgtgtaagcattaaactcttatctta
agtgtcgctatagattacacttagtgcttttgtgcactatagaagctctt
taccctctaaggtagcctagatacaagttcacactgtgcctcatggcact
gagatttcatgcacatagtgtgtatagaaaa
taacagcaacaaagaggatggccatccacctctgccattagtatacagat
ccagttgctgcccttgcttgacaggaatcatgtgactcacctctttagct
agaaagactccaaaagcccaccatgcctttcaaatctacagctctttctg
actctacaaatctttgatttactgtcaagtttctgctatattcttcccat
gttttacttttcagagttctgattacatagtttcttttatttttctattt
aaaaagttcctattgaaatttaaatattttaatatttgtttgagtttata
attacatcatttcctctttcctttcttccctcaaaatcttccatatattc
ttcctttctcttccaccatatatatatatatatatatatatatatatata
tatatatatatatatacatacatacacacacacacatacgtgtgtgtgtg
tataccctgattaatagaaatgagaaaatatatggtttgtgtaaccaata
gccttttgacatacatacacatatacatgcatacacatattctaagagtc
catgattcgccaaagaatgataccccagacttagtatgcaaaaacaaaga
gtattttatactgcagaagtccaacatgctggggtctaccatcttccaag
atggaggaccctgaagtaagctccctggcctgatttaaagcacattagac
aattcttggaggtgtatgtgacctctatctttatcttgtctctaccacct
atagggacatccagaaccattgctgggcttgggggactagaaacttttaa
ggggaaatcctgaaaactgttgctgagaaagtcaagaaactgctgctgtc
ccattgttcttgactaggccaggggcgtgcagcttctgaaacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_72695859_72696538
seq2: B6Ng01-024E18.b_41_721

seq1  CTGCCCTCACTGCTTTTGATGGTGAACTGTTGTATAGAACTTTGAACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTCACTGCTTTTGATGGTGAACTGTTGTATAGAACTTTGAACAAA  50

seq1  ATAAGCCCTTTCCTCCCTCAGTTGCTTTTGCTCATGGTGTTTCATCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCCCTTTCCTCCCTCAGTTGCTTTTGCTCATGGTGTTTCATCACAG  100

seq1  CAATAGTAACCTGAATTAATGTACTTTCCTAGTGACTCAGAATAAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGTAACCTGAATTAATGTACTTTCCTAGTGACTCAGAATAAAAAAA  150

seq1  ATGTAATGGGATGGATGAATTATCTAGGGAGGTAGTGAGCTTATACTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATGGGATGGATGAATTATCTAGGGAGGTAGTGAGCTTATACTCAT  200

seq1  AATCACTGGTGTGGCAGATTTATGGAGACTTGTCACAGCAATGTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTGGTGTGGCAGATTTATGGAGACTTGTCACAGCAATGTTTTTTT  250

seq1  TTTTTTCAGTGCCATCTCAAAGGAACGCTGTTTGCTGTGCTTTTATGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCAGTGCCATCTCAAAGGAACGCTGTTTGCTGTGCTTTTATGGTG  300

seq1  GCATGTTGAGTTGAGATTTGTGTAGTTACTTCACTAGACAAGTTGTAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTTGAGTTGAGATTTGTGTAGTTACTTCACTAGACAAGTTGTAATC  350

seq1  TTAAGGGTTGATCATATCAATCAAAGTGGCAGGTGTGTAGAGTGCAGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGTTGATCATATCAATCAAAGTGGCAGGTGTGTAGAGTGCAGTAA  400

seq1  GCAGATTCCTGATTGATTGATTAAGTTTTCAACTGCTTTGAACAGGTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATTCCTGATTGATTGATTAAGTTTTCAACTGCTTTGAACAGGTGGC  450

seq1  AAACAGATATGACCCTAGACTGCAATTGGTGCAAAAACACTAGTTGATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGATATGACCCTAGACTGCAATTGGTGCAAAAACACTAGTTGATTT  500

seq1  TTAAAGATCCCGATCTAGGGACAATGTGTAAGCATTAAACTCTTATCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGATCCCGATCTAGGGACAATGTGTAAGCATTAAACTCTTATCTTA  550

seq1  AGTGTCGCTATAGATTACACTTAGTGC-TTTGTGCACTATAGAAGCTCTT  599
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGTGTCGCTATAGATTACACTTAGTGCTTTTGTGCACTATAGAAGCTCTT  600

seq1  TACCCTCTAAGGTAGCCTAGATACAAGTTCACACTGTGCCTCAGTGGCAC  649
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TACCCTCTAAGGTAGCCTAGATACAAGTTCACACTGTGCCTCA-TGGCAC  649

seq1  TGAGATTTCATGCACATAGTGTGTA-AGAAAA  680
      ||||||||||||||||||||||||| ||||||
seq2  TGAGATTTCATGCACATAGTGTGTATAGAAAA  681