BAC Information

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BAC

Clone NameB6Ng01-025A23
Chromosome10 (Build37)
Map Location 37,008,601 - 37,190,790
singlet/doubletdoublet
Overlap genenone
Upstream geneHs3st5, Hdac2, Marcks, LOC100040846
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025A23.bB6Ng01-025A23.g
ACCDH856515DH856516
length1,1131,097
definitionDH856515|Mus musculus domesticus DNA, BAC clone: B6Ng01-025A23, 5' end.DH856516|Mus musculus domesticus DNA, BAC clone: B6Ng01-025A23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,189,672 - 37,190,790)(37,008,601 - 37,009,693)
sequence
gaattctgcctgtgaaaatccgatgtgtcattttatcaacaactcatatt
ctaggcatctgatcaaaccagcaattaaatcatctaagcactgcagagat
aaaatcagattaaaatcaaattatgatgccttgtcaaatatttccccaaa
taaaaactacaagggagccaataatcccttttcatagataccagagtctt
taagatataagataaatacaatttaacaagtcctagctcaaacaggcgat
gcttgtttcatgtgtcctatgacctcatagtggtcttacactatgttgtt
gcttccctctactcttgacatgtagtgtgtgtgctttcatccatatgcta
ctcatttagaagcatatcctacacgaaatcataacctgttagtgcagtaa
tgttctccaaccttgtaggatagaatcagtctttcctacttaacctaaac
ttcccagtatctgttacaaatatgttcagtatttttaataaattagtata
ttaataagaataatccaagaattttaatcaacacttatagaaacggcttt
tgtcaagggcatccattggtaagtctggctgtcaatttcagtcgttttat
tttgtccatccaaacagtgtggatgttgatactgcaacttcgttggtcac
cagttttaataacttttctggtttcacttcgccagaatctcaagattcaa
agagtactcatctctgtagctttagatgtcatttttattagatattttct
ttatttacatttcaaatgttatcccctttcctggtttctcctcccaaaat
tccctatcccccaacccctacccctgctcaccaacccactcactcctgct
tcctggccctggcattcccctacactggggcatagaacttacaggaccaa
ggtctcttgcccctttgatgatcaacaagacatcttctgctacataagtg
gctggagccatgagtttcaccatgtgtactctttggtggtggtatagttc
ctgggagccctgtgggtactgggtagtcatgttgttgttaccttctatgg
gcttgcaaacccttctgctttttggttcttttctctagctcctccactgg
gacctgtggtcac
gaattcatcctgtagcccaggcagaccttgatcttctggagaacctgttc
tttatccatcagtggccattaaagaacattttgagttgagagaatggcct
agttgattactcaagtttacctagtttattgtggaatttcccaacgacta
tgtgtagtggtaccaatttccttatctctgacatcgagaactgagaaatc
agtctctttcactgaaagtatcctcccatcagcataaagctgcaaacaca
ggacctggatacatagccaggctggcctgaaactcaatatgtagttcaag
catgtcttaaatatatgatcaacctgttttagcctcaagagtgctagtat
tgttggtatgcacagctttcccatgcagtaaaacctattttagaagtcta
taatcttatttaagaaagtatttctcactaggcacctttattctaatact
aacccttgagaagctaaggcaggaggataactacaaatgtaaagccagcc
tggttttcagagacaggactcaaaacaacatacaccaattatttctctga
caatggttaatcattaaaacttaccatataaggttctcatgtttccaatt
tatagttcagacacaagaattgtgaggttaaacaggtttaacagcagatt
aactcatcccggttttatcatcctctgaaaactctgcagaagggtagaat
tgaggataaactaagaggaggaggtttttttttttgttgttgttgttaga
gactgggtcttacaatatccctggttggctttaaatttactgtatagcag
aggttgattctaactcttaatcctgttttctgcctcccaagggctaagac
tacagacagcaccatataaacatctttttcatcttgagtcatttgggaat
taaacattttcacagcagatgctaagaaaattaaacaacatagcaataaa
atttgtatctggttcacactaattcttacttcctgataaacatggattgc
atttatttacattggcctagggctactgttcagatactggtgaaccttaa
aaataagaatttatttacatagtttaaatccaaattataatatcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_37189672_37190790
seq2: B6Ng01-025A23.b_45_1157 (reverse)

seq1  GTGAGCACAGGGTCCCCAGTGGAGGAGCTAGAGAAAGAACCCAAAAAGCA  50
      |||| ||||||   ||||||||||||||||||||||  | ||||||||||
seq2  GTGACCACAGG--TCCCAGTGGAGGAGCTAGAGAAAAGAACCAAAAAGCA  48

seq1  GAAGGGGTTTGCAGCCCCATAGAA-GTAACAACAACATGAACTAACCAGT  99
      ||| |||||||||  ||||||||| |||||||||||||| |||| |||||
seq2  GAA-GGGTTTGCAAGCCCATAGAAGGTAACAACAACATG-ACTACCCAGT  96

seq1  ACCCACAGAGCTCCCAGGAACTATACCACCAACCAAAGAGTACACATGGT  149
      |||||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  ACCCACAGGGCTCCCAGGAACTATACCACC-ACCAAAGAGTACACATGGT  145

seq1  GAAACTCATGGCTCCAGCCACTTATGTAGCAGAAGATGTCCTTGTTGATC  199
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GAAACTCATGGCTCCAGCCACTTATGTAGCAGAAGATGT-CTTGTTGATC  194

seq1  ATCAAAGGGGCAAGAGACCCTTGGTCCTGTAAGTTCTATGCCCCAGTGTA  249
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATCAAAGGGGCAAGAGA-CCTTGGTCCTGTAAGTTCTATGCCCCAGTGTA  243

seq1  GGGGAATGCCAGGGCCAGGAAGCAGGAGTGAGTGGGTTGGTGAGCAGGGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAATGCCAGGGCCAGGAAGCAGGAGTGAGTGGGTTGGTGAGCAGGGG  293

seq1  TAGGGGTTGGGGGATAGGGAATTTTGGGAGGAGAAACCAGGAAAGGGGAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGTTGGGGGATAGGGAATTTTGGGAGGAGAAACCAGGAAAGGGGAT  343

seq1  AACATTTGAAATGTAAATAAAGAAAATATCTAATAAAAATGACATCTAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTGAAATGTAAATAAAGAAAATATCTAATAAAAATGACATCTAAA  393

seq1  GCTACAGAGATGAGTACTCTTTGAATCTTGAGATTCTGGCGAAGTGAAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAGAGATGAGTACTCTTTGAATCTTGAGATTCTGGCGAAGTGAAAC  443

seq1  CAGAAAAGTTATTAAAACTGGTGACCAACGAAGTTGCAGTATCAACATCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAGTTATTAAAACTGGTGACCAACGAAGTTGCAGTATCAACATCC  493

seq1  ACACTGTTTGGATGGACAAAATAAAACGACTGAAATTGACAGCCAGACTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTTTGGATGGACAAAATAAAACGACTGAAATTGACAGCCAGACTT  543

seq1  ACCAATGGATGCCCTTGACAAAAGCCGTTTCTATAAGTGTTGATTAAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGGATGCCCTTGACAAAAGCCGTTTCTATAAGTGTTGATTAAAAT  593

seq1  TCTTGGATTATTCTTATTAATATACTAATTTATTAAAAATACTGAACATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGATTATTCTTATTAATATACTAATTTATTAAAAATACTGAACATA  643

seq1  TTTGTAACAGATACTGGGAAGTTTAGGTTAAGTAGGAAAGACTGATTCTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAACAGATACTGGGAAGTTTAGGTTAAGTAGGAAAGACTGATTCTA  693

seq1  TCCTACAAGGTTGGAGAACATTACTGCACTAACAGGTTATGATTTCGTGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACAAGGTTGGAGAACATTACTGCACTAACAGGTTATGATTTCGTGT  743

seq1  AGGATATGCTTCTAAATGAGTAGCATATGGATGAAAGCACACACACTACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATGCTTCTAAATGAGTAGCATATGGATGAAAGCACACACACTACA  793

seq1  TGTCAAGAGTAGAGGGAAGCAACAACATAGTGTAAGACCACTATGAGGTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAGAGTAGAGGGAAGCAACAACATAGTGTAAGACCACTATGAGGTC  843

seq1  ATAGGACACATGAAACAAGCATCGCCTGTTTGAGCTAGGACTTGTTAAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGACACATGAAACAAGCATCGCCTGTTTGAGCTAGGACTTGTTAAAT  893

seq1  TGTATTTATCTTATATCTTAAAGACTCTGGTATCTATGAAAAGGGATTAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTATCTTATATCTTAAAGACTCTGGTATCTATGAAAAGGGATTAT  943

seq1  TGGCTCCCTTGTAGTTTTTATTTGGGGAAATATTTGACAAGGCATCATAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCCCTTGTAGTTTTTATTTGGGGAAATATTTGACAAGGCATCATAA  993

seq1  TTTGATTTTAATCTGATTTTATCTCTGCAGTGCTTAGATGATTTAATTGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTTTAATCTGATTTTATCTCTGCAGTGCTTAGATGATTTAATTGC  1043

seq1  TGGTTTGATCAGATGCCTAGAATATGAGTTGTTGATAAAATGACACATCG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGATCAGATGCCTAGAATATGAGTTGTTGATAAAATGACACATCG  1093

seq1  GATTTTCACAGGCAGAATTC  1119
      ||||||||||||||||||||
seq2  GATTTTCACAGGCAGAATTC  1113

seq1: chr10_37008601_37009693
seq2: B6Ng01-025A23.g_66_1162

seq1  GAATTCATCCTGTAGCCCAGGCAGACCTTGATCTTCTGGAGAACCTGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCTGTAGCCCAGGCAGACCTTGATCTTCTGGAGAACCTGTTC  50

seq1  TTTATCCATCAGTGGCCATTAAAGAACATTTTGAGTTGAGAGAATGGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCATCAGTGGCCATTAAAGAACATTTTGAGTTGAGAGAATGGCCT  100

seq1  AGTTGATTACTCAAGTTTACCTAGTTTATTGTGGAATTTCCCAACGACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGATTACTCAAGTTTACCTAGTTTATTGTGGAATTTCCCAACGACTA  150

seq1  TGTGTAGTGGTACCAATTTCCTTATCTCTGACATCGAGAACTGAGAAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGTGGTACCAATTTCCTTATCTCTGACATCGAGAACTGAGAAATC  200

seq1  AGTCTCTTTCACTGAAAGTATCCTCCCATCAGCATAAAGCTGCAAACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTTTCACTGAAAGTATCCTCCCATCAGCATAAAGCTGCAAACACA  250

seq1  GGACCTGGATACATAGCCAGGCTGGCCTGAAACTCAATATGTAGTTCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTGGATACATAGCCAGGCTGGCCTGAAACTCAATATGTAGTTCAAG  300

seq1  CATGTCTTAAATATATGATCAACCTGTTTTAGCCTCAAGAGTGCTAGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTTAAATATATGATCAACCTGTTTTAGCCTCAAGAGTGCTAGTAT  350

seq1  TGTTGGTATGCACAGCTTTCCCATGCAGTAAAACCTATTTTAGAAGTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTATGCACAGCTTTCCCATGCAGTAAAACCTATTTTAGAAGTCTA  400

seq1  TAATCTTATTTAAGAAAGTATTTCTCACTAGGCACCTTTATTCTAATACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTTATTTAAGAAAGTATTTCTCACTAGGCACCTTTATTCTAATACT  450

seq1  AACCCTTGAGAAGCTAAGGCAGGAGGATAACTACAAATGTAAAGCCAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTTGAGAAGCTAAGGCAGGAGGATAACTACAAATGTAAAGCCAGCC  500

seq1  TGGTTTTCAGAGACAGGACTCAAAACAACATACACCAATTATTTCTCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTCAGAGACAGGACTCAAAACAACATACACCAATTATTTCTCTGA  550

seq1  CAATGGTTAATCATTAAAACTTACCATATAAGGTTCTCATGTTTCCAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGTTAATCATTAAAACTTACCATATAAGGTTCTCATGTTTCCAATT  600

seq1  TATAGTTCAGACACAAGAATTGTGAGGTTAAACAGGTTTAACAGCAGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTCAGACACAAGAATTGTGAGGTTAAACAGGTTTAACAGCAGATT  650

seq1  AACTCATCCCGGTTTTATCATCCTCTGAAAACTCTGCAGAAGGGTAGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATCCCGGTTTTATCATCCTCTGAAAACTCTGCAGAAGGGTAGAAT  700

seq1  TGAGGATAAACTAAGAGGAGGAGG-TTTTTTTTTTGTTGTTGTTGTTAGA  749
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGAGGATAAACTAAGAGGAGGAGGTTTTTTTTTTTGTTGTTGTTGTTAGA  750

seq1  GACTGGGTCTTACAATATCCCTGGTTGGCTTTAAATTTACTGTATAGCAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGGTCTTACAATATCCCTGGTTGGCTTTAAATTTACTGTATAGCAG  800

seq1  AGGTTGAATTCTAACTCTTAATCCTGTTTTCTGCCTCCCAAGGGCTAAGA  849
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTG-ATTCTAACTCTTAATCCTGTTTTCTGCCTCCCAAGGGCTAAGA  849

seq1  CTACAGACAAGCACCATATAAACATCTTTTTCATCTTGAGTCATTT-GGA  898
      |||||||| ||||||||||||||||||||||||||||||||||||| |||
seq2  CTACAGAC-AGCACCATATAAACATCTTTTTCATCTTGAGTCATTTGGGA  898

seq1  ATTAAACATTTTCACAGCAGATGCTAAGAAAATAAAACAACATAGCAATA  948
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATTAAACATTTTCACAGCAGATGCTAAGAAAATTAAACAACATAGCAATA  948

seq1  AAATTTGTATCTGGTCCACACTATTCCTTACTCCCTGAT-AACAT-GAAT  996
      ||||||||||||||| ||||||| | |||||| |||||| ||||| || |
seq2  AAATTTGTATCTGGTTCACACTAATTCTTACTTCCTGATAAACATGGATT  998

seq1  GCATTTATTTACATTGGCTAAGGAGCTACTG-TCAGTATACATGTGAA-C  1044
      ||||||||||||||||||  ||| ||||||| |||| ||||  ||||| |
seq2  GCATTTATTTACATTGGCCTAGG-GCTACTGTTCAG-ATACTGGTGAACC  1046

seq1  TTAAAAATAAGAATTTA-TTACATAATTTAAAATCAAATTAT-ATATCTT  1092
      ||||||||||||||||| ||||||| ||||||  |||||||| |||||||
seq2  TTAAAAATAAGAATTTATTTACATAGTTTAAATCCAAATTATAATATCTT  1096

seq1  C  1093
      |
seq2  C  1097