BAC Information

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BAC

Clone NameB6Ng01-025B17
Chromosome10 (Build37)
Map Location 48,909,277 - 48,910,206
singlet/doubletsinglet
Overlap geneGrik2
Upstream geneLOC546562, LOC100041689
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025B17.bB6Ng01-025B17.g
ACCDH856549DH856550
length1,256980
definitionDH856549|Mus musculus domesticus DNA, BAC clone: B6Ng01-025B17, 5' end.DH856550|Mus musculus domesticus DNA, BAC clone: B6Ng01-025B17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctttgtaccccattttttaattgggttatttgggt
ttctgtcatctaccttcttgagatttttgtatattttggatattagccct
gtattagatacagggttgggaaatatcttttcctactctgtaggttgcca
tttgtcctattgacagtgagctttgccttacagaagcttttcagtttcac
gagttctcatttgtcaatcattgtcaaatggcttggagaatgagccatta
ctgttctgttcaggaaattttctcctgtgcccatgtgttccaggctattt
cccactttcttttctatgagattctcttctattaggttttatgtggaagt
ccttgatcaacttggagtttagctttatacaaggagatttagaaatgggt
caatttgcattcatgtgcatgcatattgctagttagaccagcaccattta
ctaaagaaattttcttttttcactgtatgtttttggcttcttcgtcaaag
atcaagtgtccatagtgtgcgggtttatttctgggttttcaattctattc
cattgatctaatggtctgtctctgtaccaatagttgtttgttattttttt
tttaaatcattattgctctgagtattgaagtcagaatttttttgtaacaa
acaaataaaatcctcaaagattttatattcctctttgaaaatgatctgca
ctgaattattttatattaagtggtttcatattttcagatggctggtctta
atttttccattatgatgtgatttcccaacaatgaattttttatttcctca
gtgcttacttctttatcaagaaagaaaaaaaaacaatgcaaattctaaat
ctcttatgttcatagaaatgctttgagatcattgtatctatgaaaaaaga
ttaatgtataaaacaaaacataagcatattcaatcataagaacagaaatt
ttataactggctaaagtctaaattttactttaacttgatttcattgacaa
ataggcattcttttgaggcagaaaagaactgtttcagaattctagttgac
agtttccctgattattttaaaataagaattttataatagagtaagactgc
atttatttcatatattggggactttttgttgagaattctggaaatattaa
atacgctaatgaaatatgtagatcgaaaaatgagagaatctaaacgattg
ttaacctgaatcgatgcgtcaaacccacctcagagagtggcacgaaaaca
tatcgc
gaattccaattgtaagtgaagccaaatattctttaatggacattaatttt
tatgtcattctaatgacctttggctccttaataatttttagagactggta
attgtcacagtttagtctcctgccttgacctttaacagttttatggacca
ataaattacttaaagccattgttcttattctagcaagtctttttatttaa
agttactagtgacttcatggataaaatagatacctgaaaaatatgcctta
gaggagaaatataaattagaatatagtatacaaagaaaatattttgtgga
ataatgataataataataaatattattcaattaaactattatataatata
ctatatgatgtataatataagattttataattgcatgataaataatatct
taatgttagtaataattgataaataacttaatggccaaccttcatcagac
atgcctatctggaaacatgcagttatactccctttccatgcatattgtcc
ctgcctgctgagtcctctggggcactcttagctgcctttagcaacctaat
atccctgcttgacccccattatcctagttgagatgactagatagccatga
gaataaatgaatggaaagttgaagttggtagcaggagatttggaaagaag
gtatattgaggacttgccagaaatataggataagagaggcttccaaaaat
caatgggtgtgaacttagcaaagactctcagcagtgggatatggaacctg
aagagtttatctcctatagccatgcctgaaccccagtggagcaataggga
caccaaccagcacacaaaactttcgatgcaaaattgatcttgcctacaaa
aaatacagggtacagggatggagcagagagtgagggaatggccaagcaat
agacagcctacttagagtctattctatgggcaagcacaatccctgacact
gatatgatactgtatgtttgtagacaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_48909277_48910206
seq2: B6Ng01-025B17.g_69_996

seq1  GAATTCCAATTGTAAGTGAAGCCAAATATTCTTTAATGGACATTAATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATTGTAAGTGAAGCCAAATATTCTTTAATGGACATTAATTTT  50

seq1  TATGTCATTCTAATGACCTTTGGCTCCTTAATAATTTTTAGAGACTGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCATTCTAATGACCTTTGGCTCCTTAATAATTTTTAGAGACTGGTA  100

seq1  ATTGTCACAGTTTAGTCTCCTGCCTTGACCTTTAACAGTTTTATGGACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCACAGTTTAGTCTCCTGCCTTGACCTTTAACAGTTTTATGGACCA  150

seq1  ATAAATTACTTAAAGCCATTGTTCTTATTCTAGCAAGTCTTTTTATTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTACTTAAAGCCATTGTTCTTATTCTAGCAAGTCTTTTTATTTAA  200

seq1  AGTTACTAGTGACTTCATGGATAAAATAGATACCTGAAAAATATGCCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACTAGTGACTTCATGGATAAAATAGATACCTGAAAAATATGCCTTA  250

seq1  GAGGAGAAATATAAATTAGAATATAGTATACAAAGAAAATATTTTGTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGAAATATAAATTAGAATATAGTATACAAAGAAAATATTTTGTGGA  300

seq1  ATAATGATAATAATAATAAATATTATTCAATTAAACTATTATATAATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGATAATAATAATAAATATTATTCAATTAAACTATTATATAATATA  350

seq1  CTATATGATGTATAATATAAGATTTTATAATTGCATGATAAATAATATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATGATGTATAATATAAGATTTTATAATTGCATGATAAATAATATCT  400

seq1  TAATGTTAGTAATAATTGATAAATAACTTAATGGCCAACCTTCATCAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTAGTAATAATTGATAAATAACTTAATGGCCAACCTTCATCAGAC  450

seq1  ATGCCTATCTGGAAACATGCAGTTATACTCCCTTTCCATGCATATTGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTATCTGGAAACATGCAGTTATACTCCCTTTCCATGCATATTGTCC  500

seq1  CTGCCTGCTGAGTCCTCTGGGGCACTCTTAGCTGCCTTTAGCAACCTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGCTGAGTCCTCTGGGGCACTCTTAGCTGCCTTTAGCAACCTAAT  550

seq1  ATCCCTGCTTGACCCCCATTATCCTAGTTGAGATGACTAGATAGCCATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGCTTGACCCCCATTATCCTAGTTGAGATGACTAGATAGCCATGA  600

seq1  GAATAAATGAATGGAAAGTTGAAGTTGGTAGCAGGAGATTTGGAAAGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAATGAATGGAAAGTTGAAGTTGGTAGCAGGAGATTTGGAAAGAAG  650

seq1  GTATATTGAGGACTTGCCAGAAATATAGGATAAGAGAGGCTTCCAAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTGAGGACTTGCCAGAAATATAGGATAAGAGAGGCTTCCAAAAAT  700

seq1  CAATGGGTGTGAACTTAGCAAAGACTCTCAGCAGTGGGATATGGAACCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGGTGTGAACTTAGCAAAGACTCTCAGCAGTGGGATATGGAACCTG  750

seq1  AAGAGTTTATCTCCTATAGCCATGCCTGAACCCCAGTGGAGCAATAGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTTATCTCCTATAGCCATGCCTGAACCCCAGTGGAGCAATAGGGA  800

seq1  CACCAACCAGCACACAAAACTTTCGATGCAAAATTGATCTTGCCTACAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CACCAACCAGCACACAAAACTTTCGATGCAAAATTGATCTTGCCTAC-AA  849

seq1  AAAATACAGGGTACAGGGATGGAGCAGAGAGTGAGGGAATGGCCAAGCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACAGGGTACAGGGATGGAGCAGAGAGTGAGGGAATGGCCAAGCAA  899

seq1  TAGACAGCCTACTTAGAGTTCTATTCTATG  930
      |||||||||||||||||| |||||||||||
seq2  TAGACAGCCTACTTAGAG-TCTATTCTATG  928