BAC Information

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BAC

Clone NameB6Ng01-025D16
Chromosome10 (Build37)
Map Location 95,020,414 - 95,210,862
singlet/doubletdoublet
Overlap geneNudt4, EG628119
Upstream geneTmcc3, EG667315, 4921537D05Rik, Plxnc1, Cradd, Socs2, LOC100042004, D10Ertd322e, Ube2n
Downstream geneEea1, EG432491, LOC667380, Btg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025D16.bB6Ng01-025D16.g
ACCDH856641DH856642
length3991,097
definitionDH856641|Mus musculus domesticus DNA, BAC clone: B6Ng01-025D16, 5' end.DH856642|Mus musculus domesticus DNA, BAC clone: B6Ng01-025D16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,020,414 - 95,021,031)(95,209,756 - 95,210,862)
sequence
ataaggtctcagggtgtagaccaaactagcctggagccttatgtagacca
agctggccttgaacttatgaccttatgcacaaccataaaagttaagtaag
ccagggcctttcgtggtgacacacacctttaatcccagcactcggaaggc
aggggcaggcggatttctgaattcaaggccagcctggtctacagagtgag
ttccaggacagccagggctacacagagaaaccctgtctcgaaaaagcaaa
aaagttaagccaggggaaagttaatataattcagtgtactcttcaaatat
gagccactcagagcccagcttccaccttcccttcttccatcacaaatctt
gctttttctgtgctgggcactcatgctaagtaagtactactgggtttat
gaattcagagttattctgctcttcattatcttccctgcatgcaagatact
taaacaagtgctgaagcagaagcaggagttaagctgggcaaagagggggc
gtggggaaggatgcccagcagagggtacagtaagataaggcggtgagtga
tgaggatgtgcctagccaaacatccacagctacagatcgaagcagtaagc
atttacctctctcgtggaggcctataggtaagtgcaaccgtgtgggcttg
gctggagttaaagcctcatttgcaattactgcacatcctctttggaacga
gagctttctgaaacgctccttcctcatggaacatgacatgagcagaagag
ctcaagcgaaaccacgggagggcgtttaaagggcagctgtcaaattcaga
aagacttcattatagtcagcccccaaatccatagaaggaaacccatttta
cccacagtgggcatcacttcagggacataggatgtaaggatgtagatgaa
aattttaatgtggctacaagcggagactagacaaacaatgattcaatccc
tctcgtctagattagctaaggaacccattgccagtgtgcctgaagcacta
cagggccataaggcaaagttcaccattcttgttacaattgtcattcccga
ggcatttcctaaaagtagaaatgacacatggtatccttttaaacttactc
actccaaatgagaatgattcacccaacctgtacctaaactctattcccaa
agagttgaacattttttttaaaaaatgcagattaatgtcatttatttgaa
atgtttggaccaaaagtgtctagatttcataatttgagatgacaggtatt
tgcctggttcttaacgaggggagggagccgtggatgctcctgagagtcgc
tggtgtggaacgcccttctaaacacactgtgatactttgatttcttatgg
ttgatactgggcatatctcatcgacatgaactcaaagtgaccagctcaag
ttccagtttaatcttatcgttcctctttacctccaacgtttaatctctca
tcagataatccccaagaacctcagttccactttattttgcccttagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_95020414_95021031
seq2: B6Ng01-025D16.b_33_437

seq1  GAATTCATAAGGTCTCAGGGTGTAGACCAAACTAGCCTGGAGCCTTATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAGGTCTCAGGGTGTAGACCAAACTAGCCTGGAGCCTTATGT  50

seq1  AGACCAAGCTGGCCTTGAACTTATGACCTTATGCACAACCATAAAAGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAAGCTGGCCTTGAACTTATGACCTTATGCACAACCATAAAAGTTA  100

seq1  AGTAAGCCAGGGCCTTTCGTGGTGACACACACCTTTAATCCCAGCACTCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGCCAGGGCCTTTCGTGGTGACACACACCTTTAATCCCAGCACTCG  150

seq1  GAAGGCAGGGGCAGGCGGATTTCTGAATTCAAGGCCAGCCTGGTCTACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCAGGGGCAGGCGGATTTCTGAATTCAAGGCCAGCCTGGTCTACAG  200

seq1  AGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAA  250

seq1  AGCAAAAAAGTTAAGCCAGGGGAAAGTTAATATAATTCAGTGTACTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAAAGTTAAGCCAGGGGAAAGTTAATATAATTCAGTGTACTCTTC  300

seq1  AAATATGAGCCACTCAGAGCCCAGCTTCCACCTTCCCTTCTTCCATCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGAGCCACTCAGAGCCCAGCTTCCACCTTCCCTTCTTCCATCACA  350

seq1  AATCAGGCTTTTTCAGTGCTGGGCACACATGCTAAGTAAGTACTACTGGG  400
      ||||  |||||||| ||||||||||| |||||||||||||||||||||||
seq2  AATCTTGCTTTTTCTGTGCTGGGCACTCATGCTAAGTAAGTACTACTGGG  400

seq1  -CTATATACATCCACCTTTAAAACAAACTGAGATTGATGCCAGACTTGAA  449
        |||                                             
seq2  TTTAT---------------------------------------------  405

seq1  GGCTCCTGAGTGTAATCCCAGCACTGCAGAAAACAGAGGCGGCCTGGGCT  499
                                                        
seq2  --------------------------------------------------  405

seq1  ATGGGGAAGATGCTATCAACAAGCAAGAAAAGGGCCCTGGCAAGATAGCT  549
                                                        
seq2  --------------------------------------------------  405

seq1  CAGTTAAGTGCACTGACTGCTCTTCCGGAGGTCCTGAGTTCAACTCCCAG  599
                                                        
seq2  --------------------------------------------------  405

seq1  CAACCACATGGTGGTTTAT  618
                         
seq2  -------------------  405

seq1: chr10_95209756_95210862
seq2: B6Ng01-025D16.g_68_1164 (reverse)

seq1  CCTAAGGGCAAAATAAGGTGAACTTGAAGTCTCTGAGGATTTATCTGATG  50
      |||||||||||||||| ||| |  ||| || |||  ||  ||||||||||
seq2  CCTAAGGGCAAAATAAAGTGGAACTGAGGT-TCTTGGGGATTATCTGATG  49

seq1  ATGAGATTAAACGTTTTGAGAGTAAAGATGATAGATAAGATTTAAACTGG  100
      | ||||||||||| || ||| ||||||| ||  ||||||| |||||||||
seq2  A-GAGATTAAACG-TTGGAG-GTAAAGAGGAACGATAAGA-TTAAACTGG  95

seq1  AACTTGGGGCTGTCACTTTGAGTCATTGTCGATGAAGATACTGCCCAGTA  150
      |||||| |   ||||||||||||   |||||||| ||||| |||||||||
seq2  AACTTGAGCTGGTCACTTTGAGTTCATGTCGATG-AGATA-TGCCCAGTA  143

seq1  TCAACCATTAAGTAATCAAAGTTATCACAGTGTGCTTTAGAAGGGCG-TC  199
      ||||||| |||| |||||||| |||||||||||| |||||||||||| ||
seq2  TCAACCA-TAAGAAATCAAAG-TATCACAGTGTG-TTTAGAAGGGCGTTC  190

seq1  CACACCAGCGACTCTCAGAAGCATCCACGGCTCCCT-CCCTCGGTAAGAA  248
      |||||||||||||||||| ||||||||||||||||| |||||| ||||||
seq2  CACACCAGCGACTCTCAGGAGCATCCACGGCTCCCTCCCCTCGTTAAGAA  240

seq1  CCAGGCAAATACCTGTCATCTCAAATTATGAAATCTAGAACACTTTTGGT  298
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCAGGCAAATACCTGTCATCTCAAATTATGAAATCTAG-ACACTTTTGGT  289

seq1  CCAAACATTTCAAATAAATGACATTAAATCTGCATTTTTTAAAAAAAATG  348
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCAAACATTTCAAATAAATGACATT-AATCTGCATTTTTTAAAAAAAATG  338

seq1  TTCAACTCTTTGGGAATAGAGTTTAGGTACAGGTTGGGTGAATCATTCTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTCTTTGGGAATAGAGTTTAGGTACAGGTTGGGTGAATCATTCTC  388

seq1  ATTTGGAGTGAGTAAGTTTAAAAGGATACCATGTGTCATTTCTACTTTTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAGTGAGTAAGTTTAAAAGGATACCATGTGTCATTTCTACTTTTA  438

seq1  GGAAATGCCTCGGGAATGACAATTGTAACAAGAATGGTGAACTTTGCCTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGCCTCGGGAATGACAATTGTAACAAGAATGGTGAACTTTGCCTT  488

seq1  ATGGCCCTGTAGTGCTTCAGGCACACTGGCAATGGGTTCCTTAGCTAATC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCCTGTAGTGCTTCAGGCACACTGGCAATGGGTTCCTTAGCTAATC  538

seq1  TAGACGAGAGGGATTGAATCATTGTTTGTCTAGTCTCCGCTTGTAGCCAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACGAGAGGGATTGAATCATTGTTTGTCTAGTCTCCGCTTGTAGCCAC  588

seq1  ATTAAAATTTTCATCTACATCCTTACATCCTATGTCCCTGAAGTGATGCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATTTTCATCTACATCCTTACATCCTATGTCCCTGAAGTGATGCC  638

seq1  CACTGTGGGTAAAATGGGTTTCCTTCTATGGATTTGGGGGCTGACTATAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGGGTAAAATGGGTTTCCTTCTATGGATTTGGGGGCTGACTATAA  688

seq1  TGAAGTCTTTCTGAATTTGACAGCTGCCCTTTAAACGCCCTCCCGTGGTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCTTTCTGAATTTGACAGCTGCCCTTTAAACGCCCTCCCGTGGTT  738

seq1  TCGCTTGAGCTCTTCTGCTCATGTCATGTTCCATGAGGAAGGAGCGTTTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTTGAGCTCTTCTGCTCATGTCATGTTCCATGAGGAAGGAGCGTTTC  788

seq1  AGAAAGCTCTCGTTCCAAAGAGGATGTGCAGTAATTGCAAATGAGGCTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCTCTCGTTCCAAAGAGGATGTGCAGTAATTGCAAATGAGGCTTT  838

seq1  AACTCCAGCCAAGCCCACACGGTTGCACTTACCTATAGGCCTCCACGAGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCAGCCAAGCCCACACGGTTGCACTTACCTATAGGCCTCCACGAGA  888

seq1  GAGGTAAATGCTTACTGCTTCGATCTGTAGCTGTGGATGTTTGGCTAGGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAAATGCTTACTGCTTCGATCTGTAGCTGTGGATGTTTGGCTAGGC  938

seq1  ACATCCTCATCACTCACCGCCTTATCTTACTGTACCCTCTGCTGGGCATC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTCATCACTCACCGCCTTATCTTACTGTACCCTCTGCTGGGCATC  988

seq1  CTTCCCCACGCCCCCTCTTTGCCCAGCTTAACTCCTGCTTCTGCTTCAGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCACGCCCCCTCTTTGCCCAGCTTAACTCCTGCTTCTGCTTCAGC  1038

seq1  ACTTGTTTAAGTATCTTGCATGCAGGGAAGATAATGAAGAGCAGAATAAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTTAAGTATCTTGCATGCAGGGAAGATAATGAAGAGCAGAATAAC  1088

seq1  TCTGAATTC  1107
      |||||||||
seq2  TCTGAATTC  1097