BAC Information

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BAC

Clone NameB6Ng01-025G08
Chromosome10 (Build37)
Map Location 80,414,251 - 80,503,145
singlet/doubletdoublet
Overlap geneGng7, LOC100042403, Diras1, Slc39a3
Upstream geneArid3a, Wdr18, Grin3b, ORF61, Cnn2, Abca7, Hmha1, Polr2e, Gpx4, Sbno2, Stk11, Dos, Atp5d, Midn, Cirbp, 1600002K03Rik, Efna2, Mum1, Ndufs7, Gamt, Dazap1, Rps15, Apc2, 2310011J03Rik, Pcsk4, Reep6, Adamtsl5, 6330514A18Rik, Rkhd1, Mbd3, Uqcr, Tcfe2a, Onecut3, Atp8b3, Rexo1, Klf16, D10Bwg1364e, Scamp4, Csnk1g2, Btbd2, Mknk2, Mobkl2a, 9030607L17Rik, Ap3d1, Dot1l, Plekhj1, Sf3a2, Amh, Jsrp1, Oaz1, BC072620, Lsm7, 3110056O03Rik, Tmprss9, Timm13, Lmnb2, Gadd45b
Downstream geneSgta, Thop1, Creb3l3, Map2k2, Zbtb7a, Pias4, Eef2, Dapk3, Itgb1bp3, Atcay, 9130206N08Rik, Matk, Mrpl54, Apba3, Tjp3, Pip5k1c, 2510012J08Rik, Tbxa2r, Gipc3, Hmg20b, F630110N24Rik, 4930404N11Rik, Fzr1, Dohh, 2210404O07Rik, Nfic, Brunol5, Ncln, Edg6, Gna15, Gna11, Aes, Tle2, Tle6, BC025920, Sirt6, Ankrd24, LOC100040916, EG666448, EG666458, LOC666711, LOC382388, LOC100040944, EG210583, EG666738, EG666501, 1700123A16Rik, LOC666753, EG666537, BC062127, EG666542, EG666548, EG666790, LOC666571
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025G08.bB6Ng01-025G08.g
ACCDH856758DH856759
length1,071369
definitionDH856758|Mus musculus domesticus DNA, BAC clone: B6Ng01-025G08, 5' end.DH856759|Mus musculus domesticus DNA, BAC clone: B6Ng01-025G08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,502,076 - 80,503,145)(80,414,251 - 80,414,625)
sequence
gaattcactctgtaaaccaggctggtctggaactcagaaattcccctgcc
tctgcctcctaagtgctaggattaaagaagtgagccactactttccccgc
tcagtttgtatcttttaaaaatctttatctatgtcccaatttgtagtgca
ggctggcctcaacatctcaaatgtcagagcttctgctgtgaaccaactcc
caactccctttgtttgtttttctgtcttagagtttcatggctgtgaacag
acaccatgaccaaggcaactcttgtaaaggcagacacttcactggggcta
gcttacaggttcagaggttcagcccattttcatcatagcaggaagcatgg
cagcatccaggcaggcatggtgcatcagcagccaagagttctacatcttc
atctgaaggcagccaggagaaaactgaaatttcacactgagcaagcttga
gcatagaaaatctcaaaacccacctccacagtagaaattcccccaacaag
gcaccacctcctaacagtgccactccctatggccaagcattcaaacacgt
gaatgtactgggaccatagctattcaaactaccacagtctttctatgtaa
tcctgaatgtcctgtaacttgctatataaatcaggctggtcttgaactca
cagagatctacctgcctctactctttcctgaatgctgggagaaaaggttt
gcactactatacctggttgatcccagcacttatgaagtaaatgttgtaat
tgttattacttctactacttcatgtatgtttgcacagtgggggtacagca
catgtatgtgacatgtcatgtattttggaggccagagaacaattcagagt
ctgtactacttttccaaccctgcatggtcccaggcattgcaatcttgtga
gccaagttcctttgatccactgacccatctcatgtctcccttagcccttc
cctggtagggcatcatgtgtttttgcctggccttgaccttaggaattaac
cgaagcttgacctcatcttcttgcctcattttccagttgctaggatatgt
tattttagacctgttaaaaaa
aaagtgggaaggattcaaatattttccttacaggaaaaattggaccaata
cctccggggtggggagaaagagagggagagatggggaagagagagagaaa
gagagagaactagagaattatgcaaggctttttgtctttgaatggattct
cagaggctggcacgccaaccagcaagggatcgttgcgggcatgttgctca
cagtagcccatcaggtctgacgaggccttggagacctgtgtagcacaagg
aggagaaaggaaaggtcagatgggacagatcacagcagccataaggcagg
gagagcccagagaaggtcacacacacgctgtggtacacatgctgtggaat
agtacgtagccatgataac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_80502076_80503145
seq2: B6Ng01-025G08.b_42_1112 (reverse)

seq1  TTTTTTAACAGGTCTAAAATAAACATATCCTAGCACTTGGAAAATTGAGG  50
      |||||||||||||||||||| ||||||||||||||  ||||||| |||||
seq2  TTTTTTAACAGGTCTAAAAT-AACATATCCTAGCAACTGGAAAA-TGAGG  48

seq1  CAGGAAGATGAGGTC-AGCTTCGGTTAATTCCTAAGGTCAAGGCCAGGCA  99
      || |||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAAGAAGATGAGGTCAAGCTTCGGTTAATTCCTAAGGTCAAGGCCAGGCA  98

seq1  AAACCACATGATGCCCTA-CAGGGAAGGGCT-AGGGAGACATTGAGATGG  147
      ||| |||||||||||||| |||||||||||| ||||||||| ||||||||
seq2  AAAACACATGATGCCCTACCAGGGAAGGGCTAAGGGAGACA-TGAGATGG  147

seq1  GTCAGTGGATCAAAGGAACTTGGCTCACAAGATTGCAATGCCTGGGACCA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTGGATCAAAGGAACTTGGCTCACAAGATTGCAATGCCTGGGACCA  197

seq1  TGCAGGGTTGGAAAAGTAGTACAGACTCTGAATTGTTCTCTGGCCTCC-A  246
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGCAGGGTTGGAAAAGTAGTACAGACTCTGAATTGTTCTCTGGCCTCCAA  247

seq1  AATACATGACATGTCACATACATGTGCTGTACCCCCACTGTGCAAACATA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATGACATGTCACATACATGTGCTGTACCCCCACTGTGCAAACATA  297

seq1  CATGAAGTAGTAGAAGTAATAACAATTACAACATTTACTTCATAAGTGCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGTAGTAGAAGTAATAACAATTACAACATTTACTTCATAAGTGCT  347

seq1  GGGATCAACCAGGTATAGTAGTGCAAACCTTTTCTCCCAGCATTCAGGAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCAACCAGGTATAGTAGTGCAAACCTTTTCTCCCAGCATTCAGGAA  397

seq1  AGAGTAGAGGCAGGTAGATCTCTGTGAGTTCAAGACCAGCCTGATTTATA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGAGGCAGGTAGATCTCTGTGAGTTCAAGACCAGCCTGATTTATA  447

seq1  TAGCAAGTTACAGGACATTCAGGATTACATAGAAAGACTGTGGTAGTTTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAGTTACAGGACATTCAGGATTACATAGAAAGACTGTGGTAGTTTG  497

seq1  AATAGCTATGGTCCCAGTACATTCACGTGTTTGAATGCTTGGCCATAGGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTATGGTCCCAGTACATTCACGTGTTTGAATGCTTGGCCATAGGG  547

seq1  AGTGGCACTGTTAGGAGGTGGTGCCTTGTTGGGGGAATTTCTACTGTGGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCACTGTTAGGAGGTGGTGCCTTGTTGGGGGAATTTCTACTGTGGA  597

seq1  GGTGGGTTTTGAGATTTTCTATGCTCAAGCTTGCTCAGTGTGAAATTTCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGTTTTGAGATTTTCTATGCTCAAGCTTGCTCAGTGTGAAATTTCA  647

seq1  GTTTTCTCCTGGCTGCCTTCAGATGAAGATGTAGAACTCTTGGCTGCTGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTCCTGGCTGCCTTCAGATGAAGATGTAGAACTCTTGGCTGCTGA  697

seq1  TGCACCATGCCTGCCTGGATGCTGCCATGCTTCCTGCTATGATGAAAATG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCATGCCTGCCTGGATGCTGCCATGCTTCCTGCTATGATGAAAATG  747

seq1  GGCTGAACCTCTGAACCTGTAAGCTAGCCCCAGTGAAGTGTCTGCCTTTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAACCTCTGAACCTGTAAGCTAGCCCCAGTGAAGTGTCTGCCTTTA  797

seq1  CAAGAGTTGCCTTGGTCATGGTGTCTGTTCACAGCCATGAAACTCTAAGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTTGCCTTGGTCATGGTGTCTGTTCACAGCCATGAAACTCTAAGA  847

seq1  CAGAAAAACAAACAAAGGGAGTTGGGAGTTGGTTCACAGCAGAAGCTCTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAACAAACAAAGGGAGTTGGGAGTTGGTTCACAGCAGAAGCTCTG  897

seq1  ACATTTGAGATGTTGAGGCCAGCCTGCACTACAAATTGGGACATAGATAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGAGATGTTGAGGCCAGCCTGCACTACAAATTGGGACATAGATAA  947

seq1  AGATTTTTAAAAGATACAAACTGAGCGGGGAAAGTAGTGGCTCACTTCTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTAAAAGATACAAACTGAGCGGGGAAAGTAGTGGCTCACTTCTT  997

seq1  TAATCCTAGCACTTAGGAGGCAGAGGCAGGGGAATTTCTGAGTTCCAGAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCTAGCACTTAGGAGGCAGAGGCAGGGGAATTTCTGAGTTCCAGAC  1047

seq1  CAGCCTGGTTTACAGAGTGAATTC  1070
      ||||||||||||||||||||||||
seq2  CAGCCTGGTTTACAGAGTGAATTC  1071

seq1: chr10_80414251_80414625
seq2: B6Ng01-025G08.g_67_441

seq1  GAATTCAAAGTGGGAAGGATTCAAATATTTTCCTTACAGGAAAAATTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGTGGGAAGGATTCAAATATTTTCCTTACAGGAAAAATTGGA  50

seq1  CCAATACCTCCGGGGTGGGGAGAAAGAGAGGGAGAGATGGGGAAGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATACCTCCGGGGTGGGGAGAAAGAGAGGGAGAGATGGGGAAGAGAGA  100

seq1  GAGAAAGAGAGAGAACTAGAGAATTATGCAAGGCTTTTTGTCTTTGAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAGAGAGAACTAGAGAATTATGCAAGGCTTTTTGTCTTTGAATG  150

seq1  GATTCTCAGAGGCTGGCACGCCAACCAGCAAGGGATCGTTGCGGGCATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTCAGAGGCTGGCACGCCAACCAGCAAGGGATCGTTGCGGGCATGT  200

seq1  TGCTCACAGTAGCCCATCAGGTCTGACGAGGCCTTGGAGACCTGTGTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCACAGTAGCCCATCAGGTCTGACGAGGCCTTGGAGACCTGTGTAGC  250

seq1  ACAAGGAGGAGAAAGGAAAGGTCAGATGGGACAGATCACAGCAGCCATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAGGAGAAAGGAAAGGTCAGATGGGACAGATCACAGCAGCCATAA  300

seq1  GGCAGGGAGAGCCCAGAGAAGGTCACACACACGCTGTGGTACACATGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGAGAGCCCAGAGAAGGTCACACACACGCTGTGGTACACATGCTG  350

seq1  TGGAATAGTACGTAGCCATGATAAC  375
      |||||||||||||||||||||||||
seq2  TGGAATAGTACGTAGCCATGATAAC  375