BAC Information

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BAC

Clone NameB6Ng01-025K07
Chromosome10 (Build37)
Map Location 8,027,727 - 8,028,872
singlet/doubletsinglet
Overlap geneUst
Upstream geneLOC100039303, LOC670558, LOC626333, LOC666541, 9230019H11Rik, LOC100041405, LOC672213, Lrp11, Pcmt1, Nup43, Lats1, Katna1, BC013529, Ppil4, LOC665035, Zc3h12d, Map3k7ip2, LOC100039046
Downstream geneSash1, LOC100039173, EG666625
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025K07.bB6Ng01-025K07.g
ACCDH856930DH856931
length9561,130
definitionDH856930|Mus musculus domesticus DNA, BAC clone: B6Ng01-025K07, 5' end.DH856931|Mus musculus domesticus DNA, BAC clone: B6Ng01-025K07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctagaataatatctacaatgaatctcttgccatgtacagaaag
ggcatttattagaattactttcagactgggttccagctaacctaacaatg
atgcctataaatggaaggtccgagcacccagtagttgttcggtccatgaa
actggatgtcttagtcagtcttcaggcaatatatgctggactcctgaaga
agtgagctctgatgccaatgaaggaatggattgctagtgaagaagaacaa
gcagtcaaagagcaaaagcctccttcttctgtgtctttctctaggctcac
agtagaatgtgtgggccagattagggctgggtcttcatggctcaaaacat
ctagattatagatgcatgacttctcaacttgaagatatggttggatcttc
ccacttcatattaagcaataatccctcacagatgggttttaattaattcc
agatgtagtcaagttgacaaccaggagtagcaattactggagaactctaa
agataatttatatatattctattagcttacatgggatgggtacccctgaa
acatccaatcctcatcactggaaagagacattgataccctgaagatgtgc
gggctgctaggagatggtttgggaggaggtatgttcatcattttttttcc
ttcagggcacatttgaaaggtactttcttagcaccagatatgaaaaatag
agttttgtggatccttgggattcttgtagcgtggtgtgggaggaagacat
aggagatgaatcaactccttttctggagtgagagacagagccatgtatga
tgtaagtgttaagtgttcttctatgcccctagatgctaggctcagcactt
tggatagttggtgtggcctgaaatcacgtggtaaggggagttgtctttaa
atgtgcatgatgtgcaggattgggccatctgtgtgttctctttgagacaa
taatgt
gaattctcctgcctcctctttacatcttgtcatagagtcctggggattac
aggagctggtgttatacgcacggcttttacatggatctgagcacacaaac
tcaggtccctttgtgtgcatggctagtactttccccactgagccatttcc
tcagccccagactaagtttagctggaaaaaaaaatcaaatttttgcagtg
tgaaaatgcaggtaggagaatactttttaaattacctcctctaaagtcaa
accaggagaagggttaatcatttccttatatttctgtgacattattgaga
ttacagaaatattttaaacatgtgtagtagaatttagggtgggaatagaa
tatatacccttcattgtttctctttgattataaaaatttataaggaacat
atttcatggggaattcacagacctctgaaaatcttgggatattttggtgg
gtggtcatgtgaattatttatttgcagttatcagtaaggcaagaaagcac
tttatgttcctgtaggctgagctttatgcaacatgccatacagaaaacgt
ttagtgaaatgagttagaaattccaggcattctcagacccccctgacatc
ctgaattccttcactagaatttccaattggccctaccaaaatggacattg
tgatctttttaaaaaaatttttaaggcattttgagactgttactgtagat
gaacatcagagaaggagtatttcagattttatgaactagaaaaagctgaa
aactggaaaccaaaatgaccattcacgttaaacacagcagccttggcaac
agtgaactgagaccttcagttgttctcaaacacagcaagccatgggctat
cttcttcccagggtgtagcataggggctgccccaggtgtaaatacttgat
cattattcatgtgataaactagaccaagcacatgctctttagagacccag
atgatctgactaaaccttctcgttagttattcctgcttacatgttggaga
atcaagttgatttaatgttaattgcctcagcttctaaacttgggggtttg
tagttgaaaaagcttggaaagcatggtaagtggagccagctttcctggct
tagattaaagggaaatgaatactgtttctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_8027727_8028872
seq2: B6Ng01-025K07.g_68_1197

seq1  GAATTCTCCTGCCTCCTCTTTACATCTTGTCATAGAGTCCTGGGGATTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTGCCTCCTCTTTACATCTTGTCATAGAGTCCTGGGGATTAC  50

seq1  AGGAGCTGGTGTTATACGCACGGCTTTTACATGGATCTGAGCACACAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTGGTGTTATACGCACGGCTTTTACATGGATCTGAGCACACAAAC  100

seq1  TCAGGTCCCTTTGTGTGCATGGCTAGTACTTTCCCCACTGAGCCATTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTCCCTTTGTGTGCATGGCTAGTACTTTCCCCACTGAGCCATTTCC  150

seq1  TCAGCCCCAGACTAAGTTTAGCTGGAAAAAAAAATCAAATTTTTGCAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCCCAGACTAAGTTTAGCTGGAAAAAAAAATCAAATTTTTGCAGTG  200

seq1  TGAAAATGCAGGTAGGAGAATACTTTTTAAATTACCTCCTCTAAAGTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATGCAGGTAGGAGAATACTTTTTAAATTACCTCCTCTAAAGTCAA  250

seq1  ACCAGGAGAAGGGTTAATCATTTCCTTATATTTCTGTGACATTATTGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGAGAAGGGTTAATCATTTCCTTATATTTCTGTGACATTATTGAGA  300

seq1  TTACAGAAATATTTTAAACATGTGTAGTAGAATTTAGGGTGGGAATAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAAATATTTTAAACATGTGTAGTAGAATTTAGGGTGGGAATAGAA  350

seq1  TATATACCCTTCATTGTTTCTCTTTGATTATAAAAATTTATAAGGAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACCCTTCATTGTTTCTCTTTGATTATAAAAATTTATAAGGAACAT  400

seq1  ATTTCATGGGGAATTCACAGACCTCTGAAAATCTTGGGATATTTTGGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATGGGGAATTCACAGACCTCTGAAAATCTTGGGATATTTTGGTGG  450

seq1  GTGGTCATGTGAATTATTTATTTGCAGTTATCAGTAAGGCAAGAAAGCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCATGTGAATTATTTATTTGCAGTTATCAGTAAGGCAAGAAAGCAC  500

seq1  TTTATGTTCCTGTAGGCTGAGCTTTATGCAACATGCCATACAGAAAACGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTTCCTGTAGGCTGAGCTTTATGCAACATGCCATACAGAAAACGT  550

seq1  TTAGTGAAATGAGTTAGAAATTCCAGGCATTCTCAGACCCCCCTGACATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGAAATGAGTTAGAAATTCCAGGCATTCTCAGACCCCCCTGACATC  600

seq1  CTGAATTCCTTCACTAGAATTTCCAATTGGCCCTACCAAAATGGACATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTCCTTCACTAGAATTTCCAATTGGCCCTACCAAAATGGACATTG  650

seq1  TGATCTTTTTAAAAAAATTTTTAAGGCATTTTGAGACTGTTACTGTAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTTTTAAAAAAATTTTTAAGGCATTTTGAGACTGTTACTGTAGAT  700

seq1  GAACATCAGAGAAGGAGTATTTCAGATTTTATGAACTAGAAAAAGCTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATCAGAGAAGGAGTATTTCAGATTTTATGAACTAGAAAAAGCTGAA  750

seq1  AACTGGAAACCAAAATGACCATTCACGTTAAACACAGCAGCCTTGGCAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGAAACCAAAATGACCATTCACGTTAAACACAGCAGCCTTGGCAAC  800

seq1  AGTGAACTGAGACCTTCAGTTGTTCTCAAACACAGCAAGCCATGGGCTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAACTGAGACCTTCAGTTGTTCTCAAACACAGCAAGCCATGGGCTAT  850

seq1  CTTCTTCCCAAGGGTGTAGCATAGGGGCTGCCCCAGGTGTAAATACTTGA  900
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCCC-AGGGTGTAGCATAGGGGCTGCCCCAGGTGTAAATACTTGA  899

seq1  TCATTATTCATGTGATAAACTAGACCAAGCACATGCTCTTTTAGAGACCC  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TCATTATTCATGTGATAAACTAGACCAAGCACATGCTC-TTTAGAGACCC  948

seq1  AGATGATCTGACTAAACCCTCTCGTTAGTTATTCCTGCTTACAATGGTTG  1000
      |||||||||||||||||| ||||||||||||||||||||||||   ||||
seq2  AGATGATCTGACTAAACCTTCTCGTTAGTTATTCCTGCTTACA--TGTTG  996

seq1  GAGAAATCAAGTTGAATTTAATGTTAAATGGCTCAGCTCCTAAACTTGGG  1050
      ||| |||||||||| |||||||||||| || ||||||| |||||||||||
seq2  GAG-AATCAAGTTG-ATTTAATGTTAATTGCCTCAGCTTCTAAACTTGGG  1044

seq1  GGTTTTGTTAGTTGGGAGAAGCTGGGGAAAGCATGGGTAAGTGAAAGCCG  1100
      |||||   ||||| | | |||||  ||||||||| ||||||||  |||| 
seq2  GGTTT--GTAGTT-GAAAAAGCT-TGGAAAGCAT-GGTAAGTG-GAGCCA  1088

seq1  TCTTTCCTTGGGCTTGAGTATAAAGGGAAATTGGATCCTGTTTCTG  1146
       |||||||  ||||| ||  |||||||||| || || |||||||||
seq2  GCTTTCCT--GGCTT-AGATTAAAGGGAAA-TGAATACTGTTTCTG  1130