BAC Information

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BAC

Clone NameB6Ng01-026A11
Chromosome10 (Build37)
Map Location 26,845,794 - 27,022,363
singlet/doubletdoublet
Overlap geneLama2
Upstream geneSamd3, L3mbtl3, LOC435208, LOC667572, LOC100040349, Arhgap18
Downstream geneLOC100040385, LOC100040961, LOC100040401, Ptprk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026A11.bB6Ng01-026A11.g
ACCDH857189DH857190
length1,1241,009
definitionDH857189|Mus musculus domesticus DNA, BAC clone: B6Ng01-026A11, 5' end.DH857190|Mus musculus domesticus DNA, BAC clone: B6Ng01-026A11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,845,794 - 26,846,947)(27,021,362 - 27,022,363)
sequence
gaattccaactattgttactcagtttttaaatttgcaagttttaacattg
caatgatgaaatagtaagaatccattggaaccatttaaaactctcgtttg
cagcaggcagcaatgacttggaggatactaatcaagtgtttgacgctctg
acttattcttctgaaatactaataataggacgattttccttcagattttt
gacaattctttttagaaataaactatgcacataatttctaagtatctcaa
ttacctgcttccatggtaattgttacaaggagtcccagtaatttctttca
gatcagcattctctagctatttatactcatggcttagatgggtcaaataa
ttttacacacacacacacacacacacacacacacacacacacacacacac
acttcttcaatgttactttttattctaagctaaacgattcaagatattga
caacctgaaatatctaagaggtttctgtcgtgtaaactgtgtcctgattc
tgccttccatgacccctcctatgttaatatgtcactgaacaccataatgg
aattggtttaccatatggtcatcttccaacatcttatgaataaatgtatc
caccagcaccagtatatcttattacacaaaaatacatcctttttgactta
aagtttaatttttgccttaacaatattttttccatattaccagtatagtt
acactatcacgtccactaatccttaagaatttaatacctttaattcttta
aaacgtttatcagtgtgtcctctcttatgtttagatggccaagaacatat
ccatatgtttctttctcgagctgttgcatttatggagtattgtgtaagca
cttcattagcaaccactttagttcccatcatgccagcactccagtgtcat
tttggtagaagcatgttacaaaggtaacagctagcgaactccccggctcc
cttaggcatgtcacatagtaagcattccctgcttggattctctgttctat
tgtctctaccagagtgagcttctcatcactttcagaaactttgcttcatc
atctgatccttcagtttccgttctaagcatggcggtacagggcttacaag
gtctcaatacttacagacagcctc
gaattctcttaaatgaaaaaaatgaaacttcagtaaaacttcttggttag
aattttctaagaaatatctaagtagatcctacatatctaactaggtcaaa
tatatgtttgggtctagggtcatttaagttcacatctgttcagaaccaac
aggaaggcctaaatagtcttctaaaatcttttctaaccgtctagttttat
gaaccagtagagtactctgtgggtacaagtcttttcctgtttgttgtgga
ggatttaagatacagcagtttcaggactgaaaagactgacttttcctctt
cttactggattctaaaccctgctgcatttttgagtcgtgatgtggcttct
ctgtgttctctgatgtcatccattccatgccaagagacagtagggatcaa
ccaggattctgtttcctcttaagtcaaggattctttggtttaatgtttgt
ttttgttttctgctacctgctctacatttggacaacacctgggatggaat
gtggaaggttcaaagccaagcaagtcagtcaaatttgaacaaatgacttt
cctacaccaagctcacacaaatttatgactttttgagatccactaagacc
tctttctatttcccaatgcaagatgtaaaaaacaaaacaaaaactcaatc
aaaaatatagtacgtccctttatcagcaagataggtaaagatcaagcaac
atattttaaacatcaatttcaagtttatgccatcagatataagaatttga
ctaaaatcaatttaaatgtttagatttaggaagcagctgtactttcatat
tttcaccagcatgaaactcttttgttttcaatctttactgacactattat
cattattttgcacttacgctattataataggtgagtagtatattccattg
ttttgacttatgattttattatgacttggtgctgagcacatttttcacgt
ggttaattcatgcatgtgtatttttcacaagcgctcattttgagtacaat
caatttcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_26845794_26846947
seq2: B6Ng01-026A11.b_45_1168

seq1  GAATTCCAACTATTGTTACTCAGTTTTTAAATTTGCAAGTTTTAACATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACTATTGTTACTCAGTTTTTAAATTTGCAAGTTTTAACATTG  50

seq1  CAATGATGAAATAGTAAGAATCCATTGGAACCATTTAAAACTCTCGTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATGAAATAGTAAGAATCCATTGGAACCATTTAAAACTCTCGTTTG  100

seq1  CAGCAGGCAGCAATGACTTGGAGGATACTAATCAAGTGTTTGACGCTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGCAGCAATGACTTGGAGGATACTAATCAAGTGTTTGACGCTCTG  150

seq1  ACTTATTCTTCTGAAATACTAATAATAGGACGATTTTCCTTCAGATTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTCTTCTGAAATACTAATAATAGGACGATTTTCCTTCAGATTTTT  200

seq1  GACAATTCTTTTTAGAAATAAACTATGCACATAATTTCTAAGTATCTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATTCTTTTTAGAAATAAACTATGCACATAATTTCTAAGTATCTCAA  250

seq1  TTACCTGCTTCCATGGTAATTGTTACAAGGAGTCCCAGTAATTTCTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTGCTTCCATGGTAATTGTTACAAGGAGTCCCAGTAATTTCTTTCA  300

seq1  GATCAGCATTCTCTAGCTATTTATACTCATGGCTTAGATGGGTCAAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGCATTCTCTAGCTATTTATACTCATGGCTTAGATGGGTCAAATAA  350

seq1  TTTTACACACACACACACACACACACACACACACACACACACACACACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACACACACACACACACACACACACACACACACACACACACACACAC  400

seq1  ACTTCTTCAATGTTACTTTTTATTCTAAGCTAAACGATTCAAGATATTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTCAATGTTACTTTTTATTCTAAGCTAAACGATTCAAGATATTGA  450

seq1  CAACCTGAAATATCTAAGAGGTTTCTGTCGTGTAAACTGTGTCCTGATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTGAAATATCTAAGAGGTTTCTGTCGTGTAAACTGTGTCCTGATTC  500

seq1  TGCCTTCCATGACCCCTCCTATGTTAATATGTCACTGAACACCATAATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCCATGACCCCTCCTATGTTAATATGTCACTGAACACCATAATGG  550

seq1  AATTGGTTTACCATATGGTCATCTTCCAACATCTTATGAATAAATGTATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGTTTACCATATGGTCATCTTCCAACATCTTATGAATAAATGTATC  600

seq1  CACCAGCACCAGTATATCTTATTACACAAAAATACATCCTTTTTGACTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGCACCAGTATATCTTATTACACAAAAATACATCCTTTTTGACTTA  650

seq1  AAGTTTAATTTTTGCCTTAACAATATTTTTTCCATATTACCAGTATAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTAATTTTTGCCTTAACAATATTTTTTCCATATTACCAGTATAGTT  700

seq1  ACACTATCACGTCCACTAATCCTTAAGAATTTAATACCTTTAATTCTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTATCACGTCCACTAATCCTTAAGAATTTAATACCTTTAATTCTTTA  750

seq1  AAACGTTTATCAGTGTGTCCTCTCTTATGTTTAGATGGCCAAGAACATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGTTTATCAGTGTGTCCTCTCTTATGTTTAGATGGCCAAGAACATAT  800

seq1  CCATATGTTTCTTTCTCGAGCTGTTGCATTTATGGAGTATTGTGTAAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCATATGTTTCTTTCTCGAGCTGTTGCATTTATGGAGTATTGTGTAAGC-  849

seq1  ACTTCATTAGCAACCACTTTAGTTCCCATCATGCCAGCACTCCAGTGTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATTAGCAACCACTTTAGTTCCCATCATGCCAGCACTCCAGTGTCA  899

seq1  TTTTGGTAAGAAGCATGTTTACAAAGGTAACAGCTAGCGAAACTCCCCGG  950
      ||||||| ||||||||| ||||||||||||||||||||| ||||||||||
seq2  TTTTGGT-AGAAGCATG-TTACAAAGGTAACAGCTAGCG-AACTCCCCGG  946

seq1  CTCCCCTTAGGCATGTCACATAAGTTAAGCATTCCCCTGCTTTGGATTCT  1000
      || |||||||||||||||||||   |||||||| |||||| |||||||||
seq2  CT-CCCTTAGGCATGTCACATA--GTAAGCATT-CCCTGC-TTGGATTCT  991

seq1  CTTGTTTCTTATTGTCTCTACCCAGAGTGAGCTTCTCCAATCACTTTCAG  1050
      | ||||   ||||||||||| ||||||||||||||||  |||||||||||
seq2  C-TGTT--CTATTGTCTCTA-CCAGAGTGAGCTTCTC--ATCACTTTCAG  1035

seq1  AGACTTTGCTTCATTCATCTGACCCCTTTCCAGTTTTCGTTTCTAAGCAT  1100
      | ||||||||||| |||||||| ||   | |||||| || ||||||||||
seq2  AAACTTTGCTTCA-TCATCTGATCC---TTCAGTTTCCG-TTCTAAGCAT  1080

seq1  GGCCGTTATCAGGGCTCTTAACAGGTCTCCACATTCACTACAGACAAGCG  1150
      ||| ||   |||||  ||||  ||||||| | | |   ||||||||   |
seq2  GGCGGT--ACAGGG--CTTACAAGGTCTCAATACT---TACAGACA---G  1120

seq1  CCTC  1154
      ||||
seq2  CCTC  1124

seq1: chr10_27021362_27022363
seq2: B6Ng01-026A11.g_68_1062 (reverse)

seq1  ACTCAAAAATGAAGACAGCTTGTGAAAAATTACACATGCATGAATTAACC  50
      |||||||    | ||  |||||||||||| ||||||||||||||||||||
seq2  ACTCAAA----ATGAGCGCTTGTGAAAAA-TACACATGCATGAATTAACC  45

seq1  ACGTGAAAAATGTGCTCAGCACCAAGTCATAATAAAATCATAAGTCAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGAAAAATGTGCTCAGCACCAAGTCATAATAAAATCATAAGTCAAAA  95

seq1  CAATGGAATATTACTACTCACCTATTATAATAGCGTAAGTGCAAAATAAT  150
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CAATGGAATA-TACTACTCACCTATTATAATAGCGTAAGTGCAAAATAAT  144

seq1  GATAATAGTGTCAGTAAAGATTGAAAACAAAAGAGTTTCATGCTGGTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATAGTGTCAGTAAAGATTGAAAACAAAAGAGTTTCATGCTGGTGAA  194

seq1  AATATGAAAGTACAGCTGCTTCCTAAATCTAAACATTTTAAATTGATTTT  250
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AATATGAAAGTACAGCTGCTTCCTAAATCTAAACA-TTTAAATTGATTTT  243

seq1  AGTCAAATTCTTATATCTGATGGCATAAACTTGAAATTGATGTTTAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAATTCTTATATCTGATGGCATAAACTTGAAATTGATGTTTAAAAT  293

seq1  ATGTTGCTTGATCTTTACCTATCTTGCTGATAAAGGGACGTACTATATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGCTTGATCTTTACCTATCTTGCTGATAAAGGGACGTACTATATTT  343

seq1  TTGATTGAGTTTTTGTTTTGTTTTTTACATCTTGCATTGGGAAATAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTGAGTTTTTGTTTTGTTTTTTACATCTTGCATTGGGAAATAGAAA  393

seq1  GAGGTCTTAGTGGATCTCAAAAAGTCATAAATTTGTGTGAGCTTGGTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTTAGTGGATCTCAAAAAGTCATAAATTTGTGTGAGCTTGGTGTA  443

seq1  GGAAAGTCATTTGTTCAAATTTGACTGACTTGCTTGGCTTTGAACCTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGTCATTTGTTCAAATTTGACTGACTTGCTTGGCTTTGAACCTTCC  493

seq1  ACATTCCATCCCAGGTGTTGTCCAAATGTAGAGCAGGTAGCAGAAAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCCATCCCAGGTGTTGTCCAAATGTAGAGCAGGTAGCAGAAAACAA  543

seq1  AAACAAACATTAAACCAAAGAATCCTTGACTTAAGAGGAAACAGAATCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACATTAAACCAAAGAATCCTTGACTTAAGAGGAAACAGAATCCT  593

seq1  GGTTGATCCCTACTGTCTCTTGGCATGGAATGGATGACATCAGAGAACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGATCCCTACTGTCTCTTGGCATGGAATGGATGACATCAGAGAACAC  643

seq1  AGAGAAGCCACATCACGACTCAAAAATGCAGCAGGGTTTAGAATCCAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGCCACATCACGACTCAAAAATGCAGCAGGGTTTAGAATCCAGTA  693

seq1  AGAAGAGGAAAAGTCAGTCTTTTCAGTCCTGAAACTGCTGTATCTTAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGAAAAGTCAGTCTTTTCAGTCCTGAAACTGCTGTATCTTAAAT  743

seq1  CCTCCACAACAAACAGGAAAAGACTTGTACCCACAGAGTACTCTACTGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACAACAAACAGGAAAAGACTTGTACCCACAGAGTACTCTACTGGT  793

seq1  TCATAAAACTAGACGGTTAGAAAAGATTTTAGAAGACTATTTAGGCCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAACTAGACGGTTAGAAAAGATTTTAGAAGACTATTTAGGCCTTC  843

seq1  CTGTTGGTTCTGAACAGATGTGAACTTAAATGACCCTAGACCCAAACATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGGTTCTGAACAGATGTGAACTTAAATGACCCTAGACCCAAACATA  893

seq1  TATTTGACCTAGTTAGATATGTAGGATCTACTTAGATATTTCTTAGAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGACCTAGTTAGATATGTAGGATCTACTTAGATATTTCTTAGAAAA  943

seq1  TTCTAACCAAGAAGTTTTACTGAAGTTTCATTTTTTTCATTTAAGAGAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAACCAAGAAGTTTTACTGAAGTTTCATTTTTTTCATTTAAGAGAAT  993

seq1  TC  1002
      ||
seq2  TC  995