BAC Information

Click to search

BAC

Clone NameB6Ng01-026G06
Chromosome10 (Build37)
Map Location 46,876,435 - 46,987,743
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041632
Downstream geneLOC668252, LOC100042387, LOC100041663, LOC100042398
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026G06.bB6Ng01-026G06.g
ACCDH857449DH857450
length1,1301,059
definitionDH857449|Mus musculus domesticus DNA, BAC clone: B6Ng01-026G06, 5' end.DH857450|Mus musculus domesticus DNA, BAC clone: B6Ng01-026G06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,986,598 - 46,987,743)(46,876,435 - 46,877,502)
sequence
gaattcctcaaatacatgaatagtcactggttacaccctcagaaagatgc
tctgcaggtttagactttgatgtatagtggaatctgggtgagcttcgaac
aagatattctaaataattttttggatataagttcacaaattatgtagaca
tttctagattaataaatcatgcttcttgctctaaaaattaatcacaaagg
aaagaacattaaaataaaaacattaaaataaaaatgaggtgacttcatta
tataattatataatgtgacattttggattttcagtcattttggattttaa
gtcttggtatttctgaaggttacaccaatgcaagaaattcctacacatta
tcactcaggccagaaaaggtaagaagagtgattaaaatggattcagttca
gatacaatttatgattctcttttactcagagtacaaatagtctaagagac
ctttgaaaactgtgtagtaacagggcctgagacagatacaaactcagtgc
cctgcagccagaaatagaggatttactgcaacaccaaactcaatcaggaa
atagcccacaagccatatttccaactagttgttgaataatatgaaggaaa
actagaacataaatatctctttgtaaagtcttaaaaaaatgaaaatgttc
ctactccagtaactatagaacatacagaaataacaactgtcaattgagca
tacttagaagttagggcaaaaatatgtcccactcaaatttttgttcagtg
tgccctggagaacctggattctacactccaagttgttgctcttgttctta
gttttctgtcacaatttgatgataagcttgctgaagctctatacacctga
gttgtacaatatggagaaatcaagtttgttgaccaataagtttcctcttt
gctggctatttattataataataaaaagtgtgtagtttgtgggagagaaa
agtaattagcagcttatcagctgtgaccctgtgagctaacctactatggc
aacactcatcttgatgattcagtgagtatgacagctgtttatcaaggctt
cagaacatggatcagaaggcatgtctttattctctatttattcatggttt
tatctggtgagctcttcacacaaggtatga
gaattcataatggttgccttcagccacagatcttagggtttagaaaacaa
ggatttttattttcgttgtcctgaaatgttctacacaatttacatggcaa
agaaaaaaacactgatgtcttacctgctttcatcacaaaaatctttcagt
gtgaaatagaaaatatgaggaactaatatctctatccccatacctgatag
atttggtaaggaagttaatttgctgactctaaggacaggcatcaggtatc
ccaacattacagactctggaggaaaaatgtgctatcattctaaaaatgaa
ttaatcccaatttgttatcctcctgtctggtcaatctcaggtctactatt
ctcctgaatagatagttgtatatcattctgaaatcatagtccctttattt
tatggcttaattctctaccagagccagtcctaactatcaagtaaaccact
gttttgcattcttgtattttatatcttccaaaataaataaattacactca
tattcatattcttggaaaaatcaaatacgtgacaaaacattgtaatgtat
ttttctcctggggcagaaaatttcactaacaagttctcagcttttgacca
ttctccttcttaaacctaacgggactctccatgagatattgacttcttta
attgtgtgaggcaaaaaacaaaacaaacaaacaaacaaacaaaactgtat
ggagttttaattgatatttgacaatcacaggacacttaatagctttaaaa
taaagaaaacctatcacagaatgctgtcgagttactgacgtctttcccta
ctttcattggggaaggcccaaatcatgatacctgtaatcctctcattctt
tttggagaccccaggagtgaacctgtttctgctaattcagctgtcaatat
gctcttttttgtgtcgattgaagttcttgtttcctttttgttaggactga
gtttgtgtgcaggctcagcactgcttcatctagaggagaggatggcactt
tcaaatagcatggaaagttcagttctaagaatacttatagcttctctgca
ctctgtatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_46986598_46987743
seq2: B6Ng01-026G06.b_48_1177 (reverse)

seq1  TCATCACCTCGTGTGGAAGAGCTCAACCAGGAATAAAAAACAATGAATAA  50
      |||| |||| |||| ||||||||| |||||    | ||||| ||||||||
seq2  TCAT-ACCTTGTGT-GAAGAGCTC-ACCAG----ATAAAACCATGAATAA  43

seq1  ATAGAGAAATAAAGACATGGCCCTCCTGATCCATG-TCTGAAGCCTTTGA  99
      |||||| ||||||||||||  ||| |||||||||| ||||||||| ||||
seq2  ATAGAG-AATAAAGACATG--CCTTCTGATCCATGTTCTGAAGCC-TTGA  89

seq1  TAAACAGCTTGTCATACTCACTGAAATCATC-AGATGAAGTGTTGCCATA  148
      |||||||| |||||||||||||| ||||||| ||||| ||||||||||||
seq2  TAAACAGC-TGTCATACTCACTG-AATCATCAAGATG-AGTGTTGCCATA  136

seq1  GTTAGGTTAGCTCACAGGGTTCACAGCTGGATAAGGCTGCTAATTACTTT  198
      | ||||||||||||||||| |||||||| ||||| |||||||||||||||
seq2  G-TAGGTTAGCTCACAGGG-TCACAGCT-GATAA-GCTGCTAATTACTTT  182

seq1  TCTCTCCCACAAACTACACACTTTTTATTATTATAATAAATAGCCAGCAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCCACAAACTACACACTTTTTATTATTATAATAAATAGCCAGCAA  232

seq1  AGAGGAAACTTATTGGTCAACAAACTTGATTTCTCCATATTGTACAACTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAACTTATTGGTCAACAAACTTGATTTCTCCATATTGTACAACTC  282

seq1  AGGTGTATAGAGCTTCAGCAAGCTTATCATCAAATTGTGACAGAAAACTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTATAGAGCTTCAGCAAGCTTATCATCAAATTGTGACAGAAAACTA  332

seq1  AGAACAAGAGCAACAACTTGGAGTGTAGAATCCAGGTTCTCCAGGGCACA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAGAGCAACAACTTGGAGTGTAGAATCCAGGTTCTCCAGGGCACA  382

seq1  CTGAACAAAAATTTGAGTGGGACATATTTTTGCCCTAACTTCTAAGTATG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACAAAAATTTGAGTGGGACATATTTTTGCCCTAACTTCTAAGTATG  432

seq1  CTCAATTGACAGTTGTTATTTCTGTATGTTCTATAGTTACTGGAGTAGGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATTGACAGTTGTTATTTCTGTATGTTCTATAGTTACTGGAGTAGGA  482

seq1  ACATTTTCATTTTTTTAAGACTTTACAAAGAGATATTTATGTTCTAGTTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTCATTTTTTTAAGACTTTACAAAGAGATATTTATGTTCTAGTTT  532

seq1  TCCTTCATATTATTCAACAACTAGTTGGAAATATGGCTTGTGGGCTATTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCATATTATTCAACAACTAGTTGGAAATATGGCTTGTGGGCTATTT  582

seq1  CCTGATTGAGTTTGGTGTTGCAGTAAATCCTCTATTTCTGGCTGCAGGGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTGAGTTTGGTGTTGCAGTAAATCCTCTATTTCTGGCTGCAGGGC  632

seq1  ACTGAGTTTGTATCTGTCTCAGGCCCTGTTACTACACAGTTTTCAAAGGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGTTTGTATCTGTCTCAGGCCCTGTTACTACACAGTTTTCAAAGGT  682

seq1  CTCTTAGACTATTTGTACTCTGAGTAAAAGAGAATCATAAATTGTATCTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAGACTATTTGTACTCTGAGTAAAAGAGAATCATAAATTGTATCTG  732

seq1  AACTGAATCCATTTTAATCACTCTTCTTACCTTTTCTGGCCTGAGTGATA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAATCCATTTTAATCACTCTTCTTACCTTTTCTGGCCTGAGTGATA  782

seq1  ATGTGTAGGAATTTCTTGCATTGGTGTAACCTTCAGAAATACCAAGACTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTAGGAATTTCTTGCATTGGTGTAACCTTCAGAAATACCAAGACTT  832

seq1  AAAATCCAAAATGACTGAAAATCCAAAATGTCACATTATATAATTATATA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCAAAATGACTGAAAATCCAAAATGTCACATTATATAATTATATA  882

seq1  ATGAAGTCACCTCATTTTTATTTTAATGTTTTTATTTTAATGTTCTTTCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTCACCTCATTTTTATTTTAATGTTTTTATTTTAATGTTCTTTCC  932

seq1  TTTGTGATTAATTTTTAGAGCAAGAAGCATGATTTATTAATCTAGAAATG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGATTAATTTTTAGAGCAAGAAGCATGATTTATTAATCTAGAAATG  982

seq1  TCTACATAATTTGTGAACTTATATCCAAAAAATTATTTAGAATATCTTGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATAATTTGTGAACTTATATCCAAAAAATTATTTAGAATATCTTGT  1032

seq1  TCGAAGCTCACCCAGATTCCACTATACATCAAAGTCTAAACCTGCAGAGC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAAGCTCACCCAGATTCCACTATACATCAAAGTCTAAACCTGCAGAGC  1082

seq1  ATCTTTCTGAGGGTGTAACCAGTGACTATTCATGTATTTGAGGAATTC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCTGAGGGTGTAACCAGTGACTATTCATGTATTTGAGGAATTC  1130

seq1: chr10_46876435_46877502
seq2: B6Ng01-026G06.g_67_1125

seq1  GAATTCATAATGGTTGCCTTCAGCCACAGATCTTAGGGTTTAGAAAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAATGGTTGCCTTCAGCCACAGATCTTAGGGTTTAGAAAACAA  50

seq1  GGATTTTTATTTTCGTTGTCCTGAAATGTTCTACACAATTTACATGGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTTATTTTCGTTGTCCTGAAATGTTCTACACAATTTACATGGCAA  100

seq1  AGAAAAAAACACTGATGTCTTACCTGCTTTCATCACAAAAATCTTTCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAACACTGATGTCTTACCTGCTTTCATCACAAAAATCTTTCAGT  150

seq1  GTGAAATAGAAAATATGAGGAACTAATATCTCTATCCCCATACCTGATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATAGAAAATATGAGGAACTAATATCTCTATCCCCATACCTGATAG  200

seq1  ATTTGGTAAGGAAGTTAATTTGCTGACTCTAAGGACAGGCATCAGGTATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTAAGGAAGTTAATTTGCTGACTCTAAGGACAGGCATCAGGTATC  250

seq1  CCAACATTACAGACTCTGGAGGAAAAATGTGCTATCATTCTAAAAATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACATTACAGACTCTGGAGGAAAAATGTGCTATCATTCTAAAAATGAA  300

seq1  TTAATCCCAATTTGTTATCCTCCTGTCTGGTCAATCTCAGGTCTACTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCCCAATTTGTTATCCTCCTGTCTGGTCAATCTCAGGTCTACTATT  350

seq1  CTCCTGAATAGATAGTTGTATATCATTCTGAAATCATAGTCCCTTTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGAATAGATAGTTGTATATCATTCTGAAATCATAGTCCCTTTATTT  400

seq1  TATGGCTTAATTCTCTACCAGAGCCAGTCCTAACTATCAAGTAAACCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTTAATTCTCTACCAGAGCCAGTCCTAACTATCAAGTAAACCACT  450

seq1  GTTTTGCATTCTTGTATTTTATATCTTCCAAAATAAATAAATTACACTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGCATTCTTGTATTTTATATCTTCCAAAATAAATAAATTACACTCA  500

seq1  TATTCATATTCTTGGAAAAATCAAATACGTGACAAAACATTGTAATGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATATTCTTGGAAAAATCAAATACGTGACAAAACATTGTAATGTAT  550

seq1  TTTTCTCCTGGGGCAGAAAATTTCACTAACAAGTTCTCAGCTTTTGACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCCTGGGGCAGAAAATTTCACTAACAAGTTCTCAGCTTTTGACCA  600

seq1  TTCTCCTTCTTAAACCTAACGGGACTCTCCATGAGATATTGACTTCTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTTCTTAAACCTAACGGGACTCTCCATGAGATATTGACTTCTTTA  650

seq1  ATTGTGTGAGGCAAAAAACAAAACAAACAAACAAACAAACAAAACTGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTGAGGCAAAAAACAAAACAAACAAACAAACAAACAAAACTGTAT  700

seq1  GGAGTTTTAATTGATATTTGACAAATCACAGGACACTTAATAGC-TTAAA  749
      |||||||||||||||||||||| ||||||||||||||||||||| |||||
seq2  GGAGTTTTAATTGATATTTGAC-AATCACAGGACACTTAATAGCTTTAAA  749

seq1  ATAAAGAAAACCTATCACAGAATGCTGTCGAGTTACTGACGTCTTTCCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAAAACCTATCACAGAATGCTGTCGAGTTACTGACGTCTTTCCCT  799

seq1  AC-TTCATTGGGGAAGGCCCAAATCATGATACCTGTAATCCTCTCATTCT  848
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCATTGGGGAAGGCCCAAATCATGATACCTGTAATCCTCTCATTCT  849

seq1  TTTTGGAGACCCCAGGAGTGAACCTGTTTCTGCTTATTCAGCTGTTCAAT  898
      |||||||||||||||||||||||||||||||||| ||||||||| |||||
seq2  TTTTGGAGACCCCAGGAGTGAACCTGTTTCTGCTAATTCAGCTG-TCAAT  898

seq1  ATGCTCTTTTTTGTGTCGATTGAAGTTCTTGTTTCCTTTTTGTTAGGACT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTTTTTTGTGTCGATTGAAGTTCTTGTTTCCTTTTTGTTAGGACT  948

seq1  GAGTTTTGTTGTGCAGGCTCAAGCACTGCCTCAACCTAGAGGAGAGGATG  998
      ||||||   ||||||||||| |||||||| || | |||||||||||||||
seq2  GAGTTT--GTGTGCAGGCTC-AGCACTGCTTC-ATCTAGAGGAGAGGATG  994

seq1  GCAACTTTCAAAATAGCAATGGAAAGTTCAGTTCTTAGTATACTTATAGC  1048
      || |||||| ||||||| ||||||||||||||||| || |||||||||||
seq2  GC-ACTTTC-AAATAGC-ATGGAAAGTTCAGTTCTAAGAATACTTATAGC  1041

seq1  TTCTCTGGCATCTCTGTATC  1068
      |||||| ||| |||||||||
seq2  TTCTCT-GCA-CTCTGTATC  1059