BAC Information

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BAC

Clone NameB6Ng01-026N04
Chromosome7 (Build37)10 (Build37)
Map Location 55,048,331 - 55,048,589128,913,108 - 128,913,701
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneHps5, Gtf2h1, EG668838, EG384622, Ldha, Ldhc, Tsg101, Uevld, C86187, LOC384623, ENSMUSG00000056509, Spty2d1, LOC100040174, Tmem86a, Ptpn5, LOC100041710, Mrgpra6, EG668725, Gm660, Mrgpra1, LOC668846, LOC100040217, LOC668727, Mrgpra2, LOC638950, Mrgprc4-ps, LOC677457, EG668729, Mrgpra3, Mrgprc1-ps, LOC100040314, Mrgprc3-ps, EG435977, EG619792
Downstream geneMrgprc7-ps, Mrgpra18-ps, EG435978, Mrgprc2-ps, Mrgpra4, Mrgprx1, Mrgprb7-ps, Mrgprb12-ps, EG270335, Mrgprb5, Mrgprb4, Mrgprb13, Mrgprb8, Mrgprb1, Mrgprx2, Mrgprb2, Mrgprb9-ps, Mrgprb3, EG639116, Zdhhc13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026N04.bB6Ng01-026N04.g
ACCDH857742DH857743
length1,009600
definitionDH857742|Mus musculus domesticus DNA, BAC clone: B6Ng01-026N04, 5' end.DH857743|Mus musculus domesticus DNA, BAC clone: B6Ng01-026N04, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(55,048,331 - 55,048,589)(128,913,108 - 128,913,701)
sequence
gaattcccatcaacaccaaatttgctactgtagtaggataatgttccaca
gtcttacccatggataattttggatgaatccagagcaaaggtccttcctg
ccaaactaagccagtaggctgcatttctgtttgcagtatcaaaagattga
tgggcactccctccttacatctcactaattgtgctttactcagctcctct
tctacaatggacaaagcttgtctagcctcaggggtcagactctgccctga
atttaaatctggatctcctgatatcttaaacaagggctttaatacaacat
tatgtatccttaaatatggcctaatccaattgatatctcccaattgtaac
ctcccccagcctgaaacctgcttgctcaggggtggagcttgcagctcaat
cattctgccatgcccactgctggagcttgccactttgctcttccgaagcc
atcacgtggtcaccctgctactggaccccaagattatttggcgggaatca
ggcccccttcccctgcttcataactgcgtgcagaatagtaaaattgagct
ttgatcagaatgactgtcgcccgcttagcccttcttctcttccaggtttt
taaaatgcctttccagcctagaacccaaacatgtggtcagctggccagac
acaacatttggtgaaccaactcaggactgagaaatggcaaaggacatttg
gaagaagcactgctggtttggagctccatagaagaagaaaataattaaag
gaaattcataccggagaaggtcggtatgggctaagttgaaacagcgttaa
acccgagcgctaattcacttatgttcggcagtgaggtttatcaggactag
ggactgttaggcagttagccgtagctctcagaagctacatttttaggcat
gaaaaagaaagggtttattaaaagaaatttataatcagcagattgctcca
gtaaaaaacaaacaaaacaaaacaaaacaaaaccaaatacaacaacaaca
acaaaacaa
gaattcaagtaaacatgaaagtacaactaatgtttgactttctgtttttg
ctttattttatttaacatgattctcatttgcatccatgctattacatgag
atagggttcattgttttctatcattgattaataatccatataaatgtcaa
ttttttgtagtttttctttcaggtgagagtgagattctttccattttatt
ctattccattttattgatttcacttcacatttacctaatagttgaattat
atggcagttctatatttaattttttagggaaatccatacagaatagctat
acaattttgtatttctaccaacaatatgcaaggtttttaaagtttccttt
attcaaatcttctccagcatttcatttaaaaatatttttcctaatatctg
ttattactgaaataggaagatatttccttctgattttgacttgcatttct
gtgttgttaagctcataataaaataacaacaaaccttagtattatccttg
aaaagccaatgtgtctaaaatttcttgaatttttgcttaggacagacctt
tatatggactgagtagattatatgtgtgtgtgtgtgtgtgtgtgtgtgtg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_55048331_55048589
seq2: B6Ng01-026N04.b_52_310 (reverse)

seq1  AGGAGATCCAGATTTAAATTCAGTGAGGAGTCTGACCCCTGGGGCTAGAC  50
      ||||||||||||||||||||||| |  |||||||||||||| ||||||||
seq2  AGGAGATCCAGATTTAAATTCAGGGCAGAGTCTGACCCCTGAGGCTAGAC  50

seq1  AAGCTTTATCCATTGTAGAAAAGGAGCTGAGTAAAGCGCAATTAATGAGA  100
      ||||||| |||||||||||| |||||||||||||||| |||||| |||||
seq2  AAGCTTTGTCCATTGTAGAAGAGGAGCTGAGTAAAGCACAATTAGTGAGA  100

seq1  TGTAAGGAGGGAATGCCCATCAACCTTTTGATATTGCAAACAGAAATGCA  150
      |||||||||||| |||||||||| ||||||||| ||||||||||||||||
seq2  TGTAAGGAGGGAGTGCCCATCAATCTTTTGATACTGCAAACAGAAATGCA  150

seq1  GCCCACTGGTTTAGTTTGGCAGGATGGACCTTTGCTCTGGATTCATCCAA  200
      ||| ||||| |||||||||||||| |||||||||||||||||||||||||
seq2  GCCTACTGGCTTAGTTTGGCAGGAAGGACCTTTGCTCTGGATTCATCCAA  200

seq1  GAATATCCATGGGTAAGACCGTGGAACATTATCCAACTGCAGTAGCAAAT  250
       | |||||||||||||||| |||||||||||||| ||| |||||||||||
seq2  AATTATCCATGGGTAAGACTGTGGAACATTATCCTACTACAGTAGCAAAT  250

seq1  TTGGCGTTG  259
      |||| ||||
seq2  TTGGTGTTG  259

seq1: chr10_128913108_128913701
seq2: B6Ng01-026N04.g_71_664 (reverse)

seq1  CACACACACACACACACACACACACACATATAATCTACTCAGTCCATATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACATATAATCTACTCAGTCCATATA  50

seq1  AAGGTCTGTCCTAAGCAAAAATTCAAGAAATTTTAGACACATTGGCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTGTCCTAAGCAAAAATTCAAGAAATTTTAGACACATTGGCTTTT  100

seq1  CAAGGATAATACTAAGGTTTGTTGTTATTTTATTATGAGCTTAACAACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGATAATACTAAGGTTTGTTGTTATTTTATTATGAGCTTAACAACAC  150

seq1  AGAAATGCAAGTCAAAATCAGAAGGAAATATCTTCCTATTTCAGTAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGCAAGTCAAAATCAGAAGGAAATATCTTCCTATTTCAGTAATAA  200

seq1  CAGATATTAGGAAAAATATTTTTAAATGAAATGCTGGAGAAGATTTGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATTAGGAAAAATATTTTTAAATGAAATGCTGGAGAAGATTTGAAT  250

seq1  AAAGGAAACTTTAAAAACCTTGCATATTGTTGGTAGAAATACAAAATTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAACTTTAAAAACCTTGCATATTGTTGGTAGAAATACAAAATTGT  300

seq1  ATAGCTATTCTGTATGGATTTCCCTAAAAAATTAAATATAGAACTGCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTATTCTGTATGGATTTCCCTAAAAAATTAAATATAGAACTGCCAT  350

seq1  ATAATTCAACTATTAGGTAAATGTGAAGTGAAATCAATAAAATGGAATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCAACTATTAGGTAAATGTGAAGTGAAATCAATAAAATGGAATAG  400

seq1  AATAAAATGGAAAGAATCTCACTCTCACCTGAAAGAAAAACTACAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATGGAAAGAATCTCACTCTCACCTGAAAGAAAAACTACAAAAAA  450

seq1  TTGACATTTATATGGATTATTAATCAATGATAGAAAACAATGAACCCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATTTATATGGATTATTAATCAATGATAGAAAACAATGAACCCTAT  500

seq1  CTCATGTAATAGCATGGATGCAAATGAGAATCATGTTAAATAAAATAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGTAATAGCATGGATGCAAATGAGAATCATGTTAAATAAAATAAAG  550

seq1  CAAAAACAGAAAGTCAAACATTAGTTGTACTTTCATGTTTACTT  594
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACAGAAAGTCAAACATTAGTTGTACTTTCATGTTTACTT  594