BAC Information

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BAC

Clone NameB6Ng01-026O18
Chromosome10 (Build37)
Map Location 105,175,501 - 105,176,728
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042383, Tmtc2, EG627573
Downstream geneBC067068, Ccdc59, EG667758, EG639162, Ppfia2, Olfr1556-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026O18.bB6Ng01-026O18.g
ACCDH857811DH857812
length3371,161
definitionDH857811|Mus musculus domesticus DNA, BAC clone: B6Ng01-026O18, 5' end.DH857812|Mus musculus domesticus DNA, BAC clone: B6Ng01-026O18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atctagtttttaaagtatacctcagaccattcttatatatcaaccattgg
attaagtgcaggagtcccctatggaggagttgaagaagggactggaggag
ctgacagtttgcagccccattataggaacaacagtgtcaacaggcaaacc
tcccagagcttccagggactggatcaccaaccaaagaatacacatggagg
gatccatggtgctggccgcatatatggcaaaggttggtcttgttggacat
cagtgggggtagaggcccttggtcctgagcttgttcaatgtcccagtgta
ggggaatgccagggtgggaggatgggagtgggtagga

gaattcattcaatttgatagctacagagaaaccaattgaaaacaaacatt
agttctgttgacaaatgaaaaatttacctgaaggtttaggcccttctttg
tatatttgaagaaaataccacttatttgcaaagaacgcttcttggaataa
tctagtggccccttaaaataaaatgtgctatagtgtggtagcaaggcatt
gggacacatgaccgatcagtcactagcacagcaccacttgacagcgtcct
caagcaacactgaagtagctattagagtggactggaaagtgaagattcaa
aatgcagagcacggtttgcaacagccacacccataggagactgcaagtct
ttaaaccaacaggcatttcaagggaattctgaaatatgtactatttagga
ttaaaatggtttggttctgttattcataagccttaaataacaaaattgaa
agctggagtgaactttcttttcatgcctttggtgttcctgacatggatga
aataatatctccaagtaaaactactttggctgccttcttatttcaaaatg
agtttatcattagggaaaacttgaaaaccacgttggacaaataatccctt
aatgcttttgctggctaacaagtaattcgtcaaagcgatccaatttctac
atagcacacaaatcctgtaagacagtgagccagtgcatctgttccttctg
tatttagtctggatatgaacatcttttatttggggttggggaagccaatc
ctgaggttgaatcctcgagtagggtaatttaacataagtgacaaaatata
atttgcaatttctctcatgtgtgctttgcaatatttaatttttcttggat
ttactttattttgtatatgaatgctttgcatgtataaacgtatgtgtacc
atcagtgtgcacgttgctgacagaggacagaagacgtgccacgccagaat
ggatgatgatggctgtggaccacatctaggtgtaggactgactggtcttc
tgtcagagcaacaagtggtctaacactgagcatctctgagctccaaggtg
gcagtagtttaaagatatctggttaatacatttctttgaataatgccttt
gagaggcacaattaatgttagacgagttcccaattgagcctggtgcctga
actcatagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_105175501_105176728
seq2: B6Ng01-026O18.g_67_1227

seq1  GAATTCATTCAATTTGATAGCTACAGAGAAACCAATTGAAAACAAACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCAATTTGATAGCTACAGAGAAACCAATTGAAAACAAACATT  50

seq1  AGTTCTGTTGACAAATGAAAAATTTACCTGAAGGTTTAGGCCCTTCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGTTGACAAATGAAAAATTTACCTGAAGGTTTAGGCCCTTCTTTG  100

seq1  TATATTTGAAGAAAATACCACTTATTTGCAAAGAACGCTTCTTGGAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTGAAGAAAATACCACTTATTTGCAAAGAACGCTTCTTGGAATAA  150

seq1  TCTAGTGGCCCCTTAAAATAAAATGTGCTATAGTGTGGTAGCAAGGCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTGGCCCCTTAAAATAAAATGTGCTATAGTGTGGTAGCAAGGCATT  200

seq1  GGGACACATGACCGATCAGTCACTAGCACAGCACCACTTGACAGCGTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACATGACCGATCAGTCACTAGCACAGCACCACTTGACAGCGTCCT  250

seq1  CAAGCAACACTGAAGTAGCTATTAGAGTGGACTGGAAAGTGAAGATTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAACACTGAAGTAGCTATTAGAGTGGACTGGAAAGTGAAGATTCAA  300

seq1  AATGCAGAGCACGGTTTGCAACAGCCACACCCATAGGAGACTGCAAGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGAGCACGGTTTGCAACAGCCACACCCATAGGAGACTGCAAGTCT  350

seq1  TTAAACCAACAGGCATTTCAAGGGAATTCTGAAATATGTACTATTTAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACCAACAGGCATTTCAAGGGAATTCTGAAATATGTACTATTTAGGA  400

seq1  TTAAAATGGTTTGGTTCTGTTATTCATAAGCCTTAAATAACAAAATTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGGTTTGGTTCTGTTATTCATAAGCCTTAAATAACAAAATTGAA  450

seq1  AGCTGGAGTGAACTTTCTTTTCATGCCTTTGGTGTTCCTGACATGGATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGAGTGAACTTTCTTTTCATGCCTTTGGTGTTCCTGACATGGATGA  500

seq1  AATAATATCTCCAAGTAAAACTACTTTGGCTGCCTTCTTATTTCAAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATATCTCCAAGTAAAACTACTTTGGCTGCCTTCTTATTTCAAAATG  550

seq1  AGTTTATCATTAGGGAAAACTTGAAAACCACGTTGGACAAATAATCCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATCATTAGGGAAAACTTGAAAACCACGTTGGACAAATAATCCCTT  600

seq1  AATGCTTTTGCTGGCTAACAAGTAATTCGTCAAAGCGATCCAATTTCTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTTTGCTGGCTAACAAGTAATTCGTCAAAGCGATCCAATTTCTAC  650

seq1  ATAGCACACAAATCCTGTAAGACAGTGAGCCAGTGCATCTGTTCCTTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCACACAAATCCTGTAAGACAGTGAGCCAGTGCATCTGTTCCTTCTG  700

seq1  TATTTAGTCTGGATATGAACATCTTTTATTTGGGGTTGGGGAAGCCAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGTCTGGATATGAACATCTTTTATTTGGGGTTGGGGAAGCCAATC  750

seq1  CTGAGGTTGAATCCTCGAGTAGGGTAATTTAACATAAGTGACAAAATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTTGAATCCTCGAGTAGGGTAATTTAACATAAGTGACAAAATATA  800

seq1  ATTTGCAATTTCTCTCATGTGTGCTTTGCAATATTTAATTTTTCTTGGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCAATTTCTCTCATGTGTGCTTTGCAATATTTAATTTTTCTTGGAT  850

seq1  TTACTTTATTTTGTATATGAATGCTTTGCATGTATAAACGTATGTGTACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTATTTTGTATATGAATGCTTTGCATGTATAAACGTATGTGTACC  900

seq1  ATCAGTGTGCACGTTGCTGACAGAGGACAGAAGAAGGTGCCAACGCCAGG  950
      ||||||||||||||||||||||||||||||||| | ||||| |||||| |
seq2  ATCAGTGTGCACGTTGCTGACAGAGGACAGAAG-ACGTGCC-ACGCCA-G  947

seq1  AATTGGAATGATGGATGGCTGTGGACCAACATCTAGGTGTTAGGAACTGA  1000
      |||  | ||||| |||||||||||||| ||||||||||| |||| |||| 
seq2  AAT--GGATGAT-GATGGCTGTGGACC-ACATCTAGGTG-TAGG-ACTG-  990

seq1  ACTGGGTCTTCTGTCAGAGCAACAAGTGTTCTTAACCACTGAGCCATCTC  1050
      ||| |||||||||||||||||||||||| |||  | ||||||| ||||||
seq2  ACT-GGTCTTCTGTCAGAGCAACAAGTGGTCT--AACACTGAG-CATCTC  1036

seq1  TTGAGCTCC-ATGTTGCAGTAGTTTTTAAAGAGTAATCTGGTTTATTACA  1099
       |||||||| | || |||||||  ||||||||   |||||| ||| ||||
seq2  -TGAGCTCCAAGGTGGCAGTAG--TTTAAAGA--TATCTGG-TTAATACA  1080

seq1  ATTTTTCTTTGACTTAGTGCCTTTGAAAGAGCACTAATTTTCAATTGTTT  1149
         |||||||||  || ||||||||| || |||| ||||    | |||| 
seq2  ---TTTCTTTGA-ATAATGCCTTTGAGAG-GCAC-AATT----AATGTT-  1119

seq1  TGAGGCAGGTTCTCACTATGTAGCCCTGGTTGCCTCGGAACTCACTATGC  1199
        || |  |||| ||  ||  || ||||| ||||                
seq2  --AGACGAGTTCCCA--ATTGAG-CCTGG-TGCC----------------  1147

seq1  AGACCAGTCTGGTCTTGAACTCATAGAGA  1228
                     ||||||||||||||
seq2  ---------------TGAACTCATAGAGA  1161


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