BAC Information

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BAC

Clone NameB6Ng01-027N14
Chromosome10 (Build37)
Map Location 71,377,554 - 71,378,636
singlet/doubletsinglet
Overlap genenone
Upstream geneBicc1, LOC622551, C730027H18Rik, Tfam, Ube2d1, LOC665472, Zcd1, Ipmk, LOC100039860, LOC216081, EG216082, LOC622812, EG327767
Downstream gene1700049L16Rik, LOC100040505, Zwint
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027N14.bB6Ng01-027N14.g
ACCDH858485DH858486
length1,1781,068
definitionDH858485|Mus musculus domesticus DNA, BAC clone: B6Ng01-027N14, 5' end.DH858486|Mus musculus domesticus DNA, BAC clone: B6Ng01-027N14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgatggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttttgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagatgactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttcatcttc
tgagatcttccttaatttctttcttcagagattgaagttttatcatacag
atctttcacttccttagttagagtcacgcaagatatttttattatttgtg
actatgagaaggtgttgtttccctaatttctttctcagcctgttattctt
tgtatagaggaaggccattgacttgtttgagtttattttatatcagctac
tcacgagctgtttatcaggttagatttcctgtagatttaagtacattaaa
atgcttctatacttctgcaaagggaatttgactctctttccaatgtatcc
ttgattcaccttttgttgcaaatgctcg
gaattcattacccagtgtgcagaaagaggaacgtcgatacttttgcactg
aagtcacatgttgtaaggaaccacgagcaaggcttacctgtgttacctgt
ggtttccagtctgctccagcagctcacactgagtgtgtgcaaaatggcat
ttgccttaggagttgttgccagactctgaaaggcatggaatttgcagatg
tctctccagaggagagggtgaattacagagagaagttgacattttcttcg
tttgtttcccaagtcaccactccccatttctacccatcaggagaagccac
ttaataagcaaggcagttcagaaaacccacttgcatataatgagacacca
tcaaattaataatttcatttgattttaacatggcatgcaagttaaaatat
tcagtgacatattaaattacagattgcattataaaaacttaagtcaacaa
aaatattgtatgttgtatgtcagtactgatttgatttcatgaaggtcaga
ttcaataaaaccctaatcaaggtatattatttttttgaactaatgtttac
agtccaaagacaaaagctcttctaattagatttatcattcagttaaatta
atatttaaattaatatttttgctcttagaatatatttctattagaaaaaa
attaatcttaagtattgacaaaaccttagcaacttttttaaaactaaaga
atatccattggttaaagattcaaagctgaaatgtgcatggtaaaaggcca
tcatactgagactgattttgattgatgtttcttaaataggtttttaattt
ttcaaactaaaatgcttatccacatttgaatatttttcagcatacattca
ttactgtgttaggacattgatctcctgtggggaaggggctcttgtggcta
gtttctattacaagtaattccttataatgaatccaaaagcatggttgata
gttatacaaaactacttcttatttaatggagactctatattcagctacaa
accacacctgtttacaggtgggttgagttcatggaacgtgcctcctcaat
tatgccatagctagcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_71377554_71378636
seq2: B6Ng01-027N14.g_68_1135

seq1  GAATTCATTACCCAGTGTGCAGAAAGAGGAACGTCGATACTTTTGCACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTACCCAGTGTGCAGAAAGAGGAACGTCGATACTTTTGCACTG  50

seq1  AAGTCACATGTTGTAAGGAACCACGAGCAAGGCTTACCTGTGTTACCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACATGTTGTAAGGAACCACGAGCAAGGCTTACCTGTGTTACCTGT  100

seq1  GGTTTCCAGTCTGCTCCAGCAGCTCACACTGAGTGTGTGCAAAATGGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCCAGTCTGCTCCAGCAGCTCACACTGAGTGTGTGCAAAATGGCAT  150

seq1  TTGCCTTAGGAGTTGTTGCCAGACTCTGAAAGGCATGGAATTTGCAGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTAGGAGTTGTTGCCAGACTCTGAAAGGCATGGAATTTGCAGATG  200

seq1  TCTCTCCAGAGGAGAGGGTGAATTACAGAGAGAAGTTGACATTTTCTTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCAGAGGAGAGGGTGAATTACAGAGAGAAGTTGACATTTTCTTCG  250

seq1  TTTGTTTCCCAAGTCACCACTCCCCATTTCTACCCATCAGGAGAAGCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTCCCAAGTCACCACTCCCCATTTCTACCCATCAGGAGAAGCCAC  300

seq1  TTAATAAGCAAGGCAGTTCAGAAAACCCACTTGCATATAATGAGACACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAGCAAGGCAGTTCAGAAAACCCACTTGCATATAATGAGACACCA  350

seq1  TCAAATTAATAATTTCATTTGATTTTAACATGGCATGCAAGTTAAAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTAATAATTTCATTTGATTTTAACATGGCATGCAAGTTAAAATAT  400

seq1  TCAGTGACATATTAAATTACAGATTGCATTATAAAAACTTAAGTCAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGACATATTAAATTACAGATTGCATTATAAAAACTTAAGTCAACAA  450

seq1  AAATATTGTATGTTGTATGTCAGTACTGATTTGATTTCATGAAGGTCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTGTATGTTGTATGTCAGTACTGATTTGATTTCATGAAGGTCAGA  500

seq1  TTCAATAAAACCCTAATCAAGGTATATTATTTTTTTGAACTAATGTTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAAAACCCTAATCAAGGTATATTATTTTTTTGAACTAATGTTTAC  550

seq1  AGTCCAAAGACAAAAGCTCTTCTAATTAGATTTATCATTCAGTTAAATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAAAGACAAAAGCTCTTCTAATTAGATTTATCATTCAGTTAAATTA  600

seq1  ATATTTAAATTAATATTTTTGCTCTTAGAATATATTTCTATTAGAAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAAATTAATATTTTTGCTCTTAGAATATATTTCTATTAGAAAAAA  650

seq1  ATTAATCTTAAGTATTGACAAAACCTTAGCAACTTTTTTAAAACTAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCTTAAGTATTGACAAAACCTTAGCAACTTTTTTAAAACTAAAGA  700

seq1  ATATCCATTGGTTAAAGATTCAAAGCTGAAATGTGCATGGTAAAAGGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCATTGGTTAAAGATTCAAAGCTGAAATGTGCATGGTAAAAGGCCA  750

seq1  TCATACTGAGACTGATTTTGATTGATGTTTCTTAAAATAGGTTTTTAATT  800
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCATACTGAGACTGATTTTGATTGATGTTTCTT-AAATAGGTTTTTAATT  799

seq1  TTTCAAACTAAAATGCTTATCCACATTTGAATATTTTTCAGCATACATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAACTAAAATGCTTATCCACATTTGAATATTTTTCAGCATACATTC  849

seq1  ATTACTGTGTTAGGACATTGATCTCCTGTGGGGAAGGGGGCTCTTGTGGC  900
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATTACTGTGTTAGGACATTGATCTCCTGTGGGGAA-GGGGCTCTTGTGGC  898

seq1  TAGTTTCTAATTACAAGTAATTCCTTATAATGAATCCAAAAGCATGGGTT  950
      |||||||| |||||||||||||||||||||||||||||||||||| ||||
seq2  TAGTTTCT-ATTACAAGTAATTCCTTATAATGAATCCAAAAGCAT-GGTT  946

seq1  GAATAAGTTATACAAAAACTACTCTTTATTTAATGGAGAACTCTAATATT  1000
      ||   |||||||| |||||||||  ||||||||||||| ||||| |||||
seq2  GA--TAGTTATAC-AAAACTACTTCTTATTTAATGGAG-ACTCT-ATATT  991

seq1  CAAGCTAAACAAACCACA-CTGTTTACAGTGGTGTTGAGTTTCAGTGAAA  1049
      | ||||  |||||||||| ||||||||||  | |||||| |||| || ||
seq2  C-AGCT--ACAAACCACACCTGTTTACAGGTGGGTTGAG-TTCA-TGGAA  1036

seq1  CGTGCCT-CTCAATTATGCCTATAGCCTAAGCTTC  1083
      ||||||| |||||||||||| |||||   ||||||
seq2  CGTGCCTCCTCAATTATGCC-ATAGC--TAGCTTC  1068