BAC Information

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BAC

Clone NameB6Ng01-027P24
Chromosome10 (Build37)
Map Location 54,898,223 - 54,898,774
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041898, LOC382460
Downstream geneLOC100041927, D630037F22Rik, 1700060H10Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027P24.bB6Ng01-027P24.g
ACCDH858594DH858595
length565775
definitionDH858594|Mus musculus domesticus DNA, BAC clone: B6Ng01-027P24, 5' end.DH858595|Mus musculus domesticus DNA, BAC clone: B6Ng01-027P24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccccttaaagagatagcccctctggctatctatcccttgcttcag
ggaagatgagcggggatgagagccctgggatgtatgcttgttatagtgtg
tgtgtgtgttgtgtgtttggcacatgtgttaggtgcagagtgtgcggccc
gcacttttgccatggtagcataggcttttgctgcagtggaggcaggacaa
tctcctcagatttggtttgccgctctaaaagaaattatgctgcgttatgc
cgtggggtgcgaggctaagcactgcacagaggatagcttgctgttggcat
cctgtggaaggcacgtctgattgcatgaaggttcagtgtcctagttccct
tccctcaggaaaaacgacacgggagctggccaagacctctctgggtgatg
agcctaagggatggttttgtgtagggcccctatgcttgcacactggggat
cagacctctaccttcacccatgaggcttgcttgcagcaattaagatctgg
ccatagattaatcaacatcctggcctttttgatgcacctgccgcaagcaa
aacacaatctctcca
gaattctggattagtacttttgaagtgggtgggtggctccatccctccat
cagcaggctgtgcctgtccactggatatggtatctacaggttctctctcc
cctttgttgggtattttggttaatgttctccctgttggttcctggaacct
ctcgaatccctggcatatgggactttttagtggctacccccagtttcccg
ctccactgctacacacctcagttccatttcctgaccctctgtccgtctcc
ccctattcctcctgagtgtgcaccagcctcctgtttttcatccccatctt
ctcttccctttcagattctactcttcctctacttcctgagattattttct
tcccccttctgactaggactctaacatccacactttggtgtggtcttcct
tcttcttgggtttcatatggtccctgagttgtacttctaatatatatgag
ataatatatatgtatatctatatctatctatctatctatctatctatcta
tctatctatctatctatttatattagatgtgtatttcatatatataaaat
catattctatgacctgaataaaatatcataaataatcaagggaaactact
gtcacacatatcatgaaggtttttttttttttttttagtttcaatttttg
aaaggatgtttaccaggttttattgtaaataacctttacaaatgaatcct
tctgataattggtctttatggggttattttaatgtttttaaatgaatatt
gaatcatattagtatcatcttaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_54898223_54898774
seq2: B6Ng01-027P24.g_288_842 (reverse)

seq1  CATTAAGATGATACTAATATGATTCAATATTCATTT-AAAACATTAAAAT  49
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CATTAAGATGATACTAATATGATTCAATATTCATTTAAAAACATTAAAAT  50

seq1  AA-CCCAT-AAGAACAATTATCAGAAGGATTCATTTGTAAAGGTTATTTA  97
      || ||||| |||| ||||||||||||||||||||||||||||||||||||
seq2  AACCCCATAAAGACCAATTATCAGAAGGATTCATTTGTAAAGGTTATTTA  100

seq1  CAATAAAACCTGGTAAACATCCTTTCAAAAATTGAAACTAAAAAAAAAAA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAACCTGGTAAACATCCTTTCAAAAATTGAAACTAAAAAAAAAAA  150

seq1  AAAAAACCTTCATGATATGTGTGACAGTAGTTTCCCTTGATTATTTATGA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACCTTCATGATATGTGTGACAGTAGTTTCCCTTGATTATTTATGA  200

seq1  TATTTTATTCAGGTCATAGAATATGATTTTATATATATGAAATACACATC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATTCAGGTCATAGAATATGATTTTATATATATGAAATACACATC  250

seq1  TAATATAAATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAAATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT  300

seq1  AGATATAGATATACATATATATTATCTCATATATATTAGAAGTACAACTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATAGATATACATATATATTATCTCATATATATTAGAAGTACAACTC  350

seq1  AGGGACCATATGAAACCCAAGAAGAAGGAAGACCACACCAAAGTGTGGAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACCATATGAAACCCAAGAAGAAGGAAGACCACACCAAAGTGTGGAT  400

seq1  GTTAGAGTCCTAGTCAGAAGGGGGAAGAAAATAATCTCAGGAAGTAGAGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAGTCCTAGTCAGAAGGGGGAAGAAAATAATCTCAGGAAGTAGAGG  450

seq1  AAGAGTAGAATCTGAAAGGGAAGAGAAGATGGGGATGAAAAACAGGAGGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTAGAATCTGAAAGGGAAGAGAAGATGGGGATGAAAAACAGGAGGC  500

seq1  TGGTGCACACTCAGGAGGAATAGGGGGAGACGGACAGAGGGTCAGGAAAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCACACTCAGGAGGAATAGGGGGAGACGGACAGAGGGTCAGGAAAT  550

seq1  GGAAC  552
      |||||
seq2  GGAAC  555