BAC Information

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BAC

Clone NameB6Ng01-028H06
Chromosome10 (Build37)
Map Location 71,794,431 - 71,795,647
singlet/doubletsinglet
Overlap genenone
Upstream geneZcd1, Ipmk, LOC100039860, LOC216081, EG216082, LOC622812, EG327767, 1700049L16Rik, LOC100040505
Downstream geneZwint, LOC432471, LOC544705
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028H06.bB6Ng01-028H06.g
ACCDH858924DH858925
length1,185517
definitionDH858924|Mus musculus domesticus DNA, BAC clone: B6Ng01-028H06, 5' end.DH858925|Mus musculus domesticus DNA, BAC clone: B6Ng01-028H06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctagggagagagagagatgtgaaacatgccagaacttactg
agaaaatgtcccgtattaactattttcaatgaaaataatgagccagacaa
gtttctctccctcctgaagagactatatatgttcctgttgggttccagtc
catttttctttattaagaaggtattgacaagataagcgtatttcctgctg
tctcataaaagcatccagtcatacattatctgtgctgagagggaaaacac
tcaaagaaattcatttgatgcaaggaagtaacagctttgcaaccggtgaa
agaagaggactttcaaatgtttgaaattacagtggaacattgacccaaag
gggccaaatcagacattcctgctcataaaatgcagttgaaacatcccatc
ataagactaaatcaatatcttggcaggtggttacgacatattttttccag
ctaatgttttctttcccctactggtattgaaaacaaatatttccagaagc
tgattaaattcttacttgttgaaaaaaaaagtcttgcccagaaaaatcaa
tggttaaaacaggcaggatgtgtcaagtcaggatcaattccttttgggct
ataaatatctactctttgtattaactcacaaggaggtatgtacatatagg
gacgtgggtgtgtttgtaaaacttattttaaaataggagcaatgtgtgag
gtgtgcatcaccctctttaatcaaaagaagtgcaaaaattcttactaata
atacatcttattttatgcagcctttacagaatttgtaagttggtaatatt
caacacactgggtcccaggtttcttattgagattaaccgcatcagtgcac
acaagaagcatatgttacagaggggatatttagggggaaatatggacaaa
ttacttcacatgcaaaccctcctgctcatcctttcttaacaatttaacat
acattcatatattgattttagtgtctcacttcctgtctctgctctcatgc
ttttcctctagggaagaacccttctcacccgagtcttcttatgtgcctaa
cctactggttaatgcatctgtctgtgcatgagcaagaatacttacagtac
ccacaggctcctccattccctcatgaacctgttagctgctaaagtcctag
gaagaaatggaaccgaactcatagactatgtgtgt

tttacttgggattttctagttttggaacacatgctggcagaagccgggag
gatacacacagaatgctgaaatgatagttggcttcttattttcagctgtg
cataatgaggtagaggcagaatgaacttgctgttcagttgtttcccagca
gaacctaaaggaagcattcccaaccagaacagccaagccaggaagatggc
atcttttctccctttcagcctttccagacaatggagaggaaccatggaga
gaaggaacgatttcaggactcagattaaaaaaaaaaaaatcaaacttttg
cccctggcacatatgtagcagatgtgcagctcagtcttcatgtgggtccc
ccaccaactcgatcctctgactcaagcaggggctgtccataaagctgttg
cctgactgtggaatccattccctagctgggctgctttgtctggcctcctt
gggagaggaagcacctaaccctgcagagacttgatgcgccagggtctgga
gtgggggtggggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_71794431_71795647
seq2: B6Ng01-028H06.b_44_1228

seq1  GAATTCTTTCTAGGGAGAGAGAGAGATGTGAAACATGCCAGAACTTACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTAGGGAGAGAGAGAGATGTGAAACATGCCAGAACTTACTG  50

seq1  AGAAAATGTCCCGTATTAACTATTTTCAATGAAAATAATGAGCCAGACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGTCCCGTATTAACTATTTTCAATGAAAATAATGAGCCAGACAA  100

seq1  GTTTCTCTCCCTCCTGAAGAGACTATATATGTTCCTGTTGGGTTCCAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTCCCTCCTGAAGAGACTATATATGTTCCTGTTGGGTTCCAGTC  150

seq1  CATTTTTCTTTATTAAGAAGGTATTGACAAGATAAGCGTATTTCCTGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTCTTTATTAAGAAGGTATTGACAAGATAAGCGTATTTCCTGCTG  200

seq1  TCTCATAAAAGCATCCAGTCATACATTATCTGTGCTGAGAGGGAAAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATAAAAGCATCCAGTCATACATTATCTGTGCTGAGAGGGAAAACAC  250

seq1  TCAAAGAAATTCATTTGATGCAAGGAAGTAACAGCTTTGCAACCGGTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAAATTCATTTGATGCAAGGAAGTAACAGCTTTGCAACCGGTGAA  300

seq1  AGAAGAGGACTTTCAAATGTTTGAAATTACAGTGGAACATTGACCCAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGACTTTCAAATGTTTGAAATTACAGTGGAACATTGACCCAAAG  350

seq1  GGGCCAAATCAGACATTCCTGCTCATAAAATGCAGTTGAAACATCCCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAAATCAGACATTCCTGCTCATAAAATGCAGTTGAAACATCCCATC  400

seq1  ATAAGACTAAATCAATATCTTGGCAGGTGGTTACGACATATTTTTTCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGACTAAATCAATATCTTGGCAGGTGGTTACGACATATTTTTTCCAG  450

seq1  CTAATGTTTTCTTTCCCCTACTGGTATTGAAAACAAATATTTCCAGAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTTTTCTTTCCCCTACTGGTATTGAAAACAAATATTTCCAGAAGC  500

seq1  TGATTAAATTCTTACTTGTTGAAAAAAAAAGTCTTGCCCAGAAAAATCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAAATTCTTACTTGTTGAAAAAAAAAGTCTTGCCCAGAAAAATCAA  550

seq1  TGGTTAAAACAGGCAGGATGTGTCAAGTCAGGATCAATTCCTTTTGGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAAAACAGGCAGGATGTGTCAAGTCAGGATCAATTCCTTTTGGGCT  600

seq1  ATAAATATCTACTCTTTGTATTAACTCACAAGGAGGTATGTACATATAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATCTACTCTTTGTATTAACTCACAAGGAGGTATGTACATATAGG  650

seq1  GACGTGGGTGTGTTTGTAAAACTTATTTTAAAATAGGAGCAATGTGTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTGGGTGTGTTTGTAAAACTTATTTTAAAATAGGAGCAATGTGTGAG  700

seq1  GTGTGCATCACCCTCTTTAATCAAAAGAAGTGCAAAAATTCTTACTAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCATCACCCTCTTTAATCAAAAGAAGTGCAAAAATTCTTACTAATA  750

seq1  ATACATCTTATTTTATGCAGCCTTTACAGAATTTGTAAGTTGGTAATATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATCTTATTTTATGCAGCCTTTACAGAATTTGTAAGTTGGTAATATT  800

seq1  CAACACACTGGGTCCCAGGTTTCTTATTGAGATTAACCGCATCAGTGCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACACTGGGTCCCAGGTTTCTTATTGAGATTAACCGCATCAGTGCAC  850

seq1  ACAAGAAGCATATGTTACAGAGGGGATATTTAAGGGGAAATATGGACAAA  900
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACAAGAAGCATATGTTACAGAGGGGATATTTAGGGGGAAATATGGACAAA  900

seq1  TTACTTCACATGCAAACCCTCCTGCTCATCCTTTCTTTAACAATTTAACA  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||| 
seq2  TTACTTCACATGCAAACCCTCCTGCTCATCCTTTC-TTAACAATTTAAC-  948

seq1  ATACATTCATATATTGAATTTTAGTGTCTCAACTTCCTGTCTCTGCTCTC  1000
      |||||||||||||||| ||||||||||||| |||||||||||||||||||
seq2  ATACATTCATATATTG-ATTTTAGTGTCTC-ACTTCCTGTCTCTGCTCTC  996

seq1  ATGCTTTTTCCTCTAGGGAAGAAACCCTTCTTCACCCGAGTCTTCTTATG  1050
      |||| |||||||||||||||| |||||||| |||||||||||||||||||
seq2  ATGC-TTTTCCTCTAGGGAAG-AACCCTTC-TCACCCGAGTCTTCTTATG  1043

seq1  TGCCTAACCTACCTGGTTTAAATGCATTCCTTGTCTGTGCATTGGAGCAA  1100
      ||||||||||| ||||||  |||||||    |||||||||||  ||||||
seq2  TGCCTAACCTA-CTGGTT--AATGCAT---CTGTCTGTGCAT--GAGCAA  1085

seq1  GAATAACTTACCAGTACCCACAGGGCTCCCTCCCATCCCCTCATTGACAA  1150
      |||| ||||| ||||||||||| ||||||   |||| |||||||  ||  
seq2  GAAT-ACTTA-CAGTACCCACA-GGCTCC--TCCATTCCCTCATGAAC--  1128

seq1  CTGTTAGCTGCTAAGAGTCCCTAGGAAAGAATGGGACCCAAAAATTTTAA  1200
      |||||||||||||| ||| ||||||||  ||||| ||| ||      | |
seq2  CTGTTAGCTGCTAA-AGT-CCTAGGAAGAAATGGAACCGAA-----CTCA  1171

seq1  TTAGGCACTATGTGTGT  1217
       |||  |||||||||||
seq2  -TAG--ACTATGTGTGT  1185


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