BAC Information

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BAC

Clone NameB6Ng01-028I13
Chromosome10 (Build37)
Map Location 41,297,967 - 41,422,754
singlet/doubletdoublet
Overlap geneEG629461
Upstream geneSlc22a16, Ddo, 9030224M15Rik, Cdc40, Wasf1, Gpr6, A530089I17Rik, LOC633979, Zbtb24, Mical1, Smpd2, Ppil6, Cd164, 5033413D22Rik
Downstream gene2410017P07Rik, Sesn1, Armc2, 1700016J18Rik, LOC624784, Foxo3a, Lace1, LOC666540, Snx3, Nr2e1, c222389, Ostm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028I13.bB6Ng01-028I13.g
ACCDH858986DH858987
length9921,047
definitionDH858986|Mus musculus domesticus DNA, BAC clone: B6Ng01-028I13, 5' end.DH858987|Mus musculus domesticus DNA, BAC clone: B6Ng01-028I13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,421,750 - 41,422,754)(41,297,967 - 41,299,023)
sequence
gaattcagctcttttacaaaaccatggcataaaccaagcaaaagcttcaa
aatcctgatttatgctgctaaaaccacatgaaaacaatctcaaatacgcc
gactagtctcctacacttccctgaggaggaggagcagagtcaagttcaaa
aagtaaaaagtatataattgcacatggtaattccaaaaagttgtatcatc
tttttttggtggcaagatggctcaggaggtaaaacagcttgtgatgtgaa
catggtgcccaagttcaagcctcagagcgcacataaatgttgaaggaggg
aaccaacttcacacacacacactttttaaaaaattaacacacagtgccaa
gtgtggtagctcacacttgtaatcctagcatgaagtagaattggaccaag
ggatccggaggtccaggctaggctgagctatgttagcatagtcaaaaaca
agaaggagaaggaggagaaggagaagaaggagaaagagaaggaaggagga
agaaggaagaaagaagataagacagaaggaagaagaaagaagaaaagaaa
agaaaacttaacccagagaaagcagctccatcagtttctaacagtgtcag
atacccaggcatgatggtgtgtgctttttttttttttttttttttttttg
gttttgttttttgagacagggtttctctgtgtggccctggctgtcctaga
actcactttgtagaccaggctggcctcaaactcagacatccacctgcctc
tgcctcccaagtgctgagattaaaggcatgcgccaccatgcccagctggt
gtgtgcttttaatccgagcattttgggaattggaggtaggggctctctat
gagttgaagcctggtctctgtggcaagttccaggcagccagggtgattca
gtatgaccttttctaaacaaaaaagaaaagtcagccaccatgataatata
gtcaaatgcccatgcagcgcagaggtctagatttctttctag
gaattcattataaaactcagactggcctcaaactcatggcagtcctacct
tagcctccccaatgtgaggattacaggtgtaagccactgccattgtctac
ggtgagtatggacccatgggtaatatgtgagtcaggatagaggggcacag
gagaaggggaaggcacccctcactctagagtctgcttcaagcttctaacc
agtcaagaattcagaatttcaggagctggggagagatgcctcagtagttc
aaagcacttacttctcttttagaggacccaagttcatctcccagcatccc
agcataaacttaaaaagaatctcagcacaactggcaaaatgtactgggaa
ggttccgaacacagggacaatattcctcttctatagagaagaatgtcaga
acagaatgtcagagcatgattgagaactaagcccatgtgaccttgcagtg
tagccttacactttttccaggttttctgagaatctcataaaacaagacta
attcatcgttagagacatcagctctcttcctgcaacccttgaacctaggg
ttttaccctagcagccatgaccctagtcagcctttgttcatgcttgggtt
gtcaaccctttaagacagtggttcagagagcagtgcacataatgactgca
ggactctgaacagtgacaatctctcccagagattcacagccatgctctct
ttgttatctccattctaaataggataaacttctcttaataaacaccaaca
ctgttttatactggctcatcctgaaattctgttccctagagaagccgagc
ctctgcctctaactgagcaccagtccctgaaagatcagggagcccttcag
cctgtggaggtagcatgggatagtacctgtcccactagcacagacagttt
gcattctgaaaacaatgttactttcaaggagtagaacaacatgcattatc
tgttggggagggtagatcttcttggacttttctgatagaacagtgtcatt
ctctataacttttctcatacttcttggaatcatgtgaattctaaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_41421750_41422754
seq2: B6Ng01-028I13.b_47_1038 (reverse)

seq1  CTAGAAAGAAATCTAGAACTTCTGCCGCCTGCCATGGTGCATTTTGACTA  50
      |||||||||||||||| || |||||   ||| ||||| ||| ||||||||
seq2  CTAGAAAGAAATCTAG-ACCTCTGC--GCTG-CATGG-GCA-TTTGACTA  44

seq1  TATTTAATTCATTGGTGGCTGACTTTTTCTTTTTTTGTTTAGAAAAGGTC  100
      ||||    ||| |||||||||||||||   ||||||||||||||||||||
seq2  TATT---ATCA-TGGTGGCTGACTTTT--CTTTTTTGTTTAGAAAAGGTC  88

seq1  ATACTGAATCACCCTGGCTGGCCTGGAACTTGCCACAGAGACCAGGCTTC  150
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATACTGAATCACCCTGGCT-GCCTGGAACTTGCCACAGAGACCAGGCTTC  137

seq1  AACTCATAGAGAGCCCCTACCTCCAATTCCCAAAATGCTCGGATTAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATAGAGAGCCCCTACCTCCAATTCCCAAAATGCTCGGATTAAAAG  187

seq1  CACACACCAGCTGGGCATGGTGGCGCATGCCTTTAATCTCAGCACTTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACCAGCTGGGCATGGTGGCGCATGCCTTTAATCTCAGCACTTGGG  237

seq1  AGGCAGAGGCAGGTGGATGTCTGAGTTTGAGGCCAGCCTGGTCTACAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAGGCAGGTGGATGTCTGAGTTTGAGGCCAGCCTGGTCTACAAAG  287

seq1  TGAGTTCTAGGACAGCCAGGGCCACACAGAGAAACCCTGTCTCAAAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCTAGGACAGCCAGGGCCACACAGAGAAACCCTGTCTCAAAAAAC  337

seq1  AAAACCAAAAAAAAAAAAAAAAAAAAAAAAAGCACACACCATCATGCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAAAAAAAAAAAAAAAAAAAAAAAAAGCACACACCATCATGCCTG  387

seq1  GGTATCTGACACTGTTAGAAACTGATGGAGCTGCTTTCTCTGGGTTAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCTGACACTGTTAGAAACTGATGGAGCTGCTTTCTCTGGGTTAAGT  437

seq1  TTTCTTTTCTTTTCTTCTTTCTTCTTCCTTCTGTCTTATCTTCTTTCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTCTTTTCTTCTTTCTTCTTCCTTCTGTCTTATCTTCTTTCTTC  487

seq1  CTTCTTCCTCCTTCCTTCTCTTTCTCCTTCTTCTCCTTCTCCTCCTTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCCTCCTTCCTTCTCTTTCTCCTTCTTCTCCTTCTCCTCCTTCTC  537

seq1  CTTCTTGTTTTTGACTATGCTAACATAGCTCAGCCTAGCCTGGACCTCCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGTTTTTGACTATGCTAACATAGCTCAGCCTAGCCTGGACCTCCG  587

seq1  GATCCCTTGGTCCAATTCTACTTCATGCTAGGATTACAAGTGTGAGCTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCTTGGTCCAATTCTACTTCATGCTAGGATTACAAGTGTGAGCTAC  637

seq1  CACACTTGGCACTGTGTGTTAATTTTTTAAAAAGTGTGTGTGTGTGAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTGGCACTGTGTGTTAATTTTTTAAAAAGTGTGTGTGTGTGAAGT  687

seq1  TGGTTCCCTCCTTCAACATTTATGTGCGCTCTGAGGCTTGAACTTGGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCCTCCTTCAACATTTATGTGCGCTCTGAGGCTTGAACTTGGGCA  737

seq1  CCATGTTCACATCACAAGCTGTTTTACCTCCTGAGCCATCTTGCCACCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTTCACATCACAAGCTGTTTTACCTCCTGAGCCATCTTGCCACCAA  787

seq1  AAAAAGATGATACAACTTTTTGGAATTACCATGTGCAATTATATACTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGATGATACAACTTTTTGGAATTACCATGTGCAATTATATACTTTT  837

seq1  TACTTTTTGAACTTGACTCTGCTCCTCCTCCTCAGGGAAGTGTAGGAGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTGAACTTGACTCTGCTCCTCCTCCTCAGGGAAGTGTAGGAGAC  887

seq1  TAGTCGGCGTATTTGAGATTGTTTTCATGTGGTTTTAGCAGCATAAATCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCGGCGTATTTGAGATTGTTTTCATGTGGTTTTAGCAGCATAAATCA  937

seq1  GGATTTTGAAGCTTTTGCTTGGTTTATGCCATGGTTTTGTAAAAGAGCTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTGAAGCTTTTGCTTGGTTTATGCCATGGTTTTGTAAAAGAGCTG  987

seq1  AATTC  1005
      |||||
seq2  AATTC  992

seq1: chr10_41297967_41299023
seq2: B6Ng01-028I13.g_67_1113

seq1  GAATTCATTATAAAACTCAGACTGGCCTCAAACTCATGGCAGTCCTACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTATAAAACTCAGACTGGCCTCAAACTCATGGCAGTCCTACCT  50

seq1  TAGCCTCCCCAATGTGAGGATTACAGGTGTAAGCCACTGCCATTGTCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTCCCCAATGTGAGGATTACAGGTGTAAGCCACTGCCATTGTCTAC  100

seq1  GGTGAGTATGGACCCATGGGTAATATGTGAGTCAGGATAGAGGGGCACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGTATGGACCCATGGGTAATATGTGAGTCAGGATAGAGGGGCACAG  150

seq1  GAGAAGGGGAAGGCACCCCTCACTCTAGAGTCTGCTTCAAGCTTCTAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGGGAAGGCACCCCTCACTCTAGAGTCTGCTTCAAGCTTCTAACC  200

seq1  AGTCAAGAATTCAGAATTTCAGGAGCTGGGGAGAGATGCCTCAGTAGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGAATTCAGAATTTCAGGAGCTGGGGAGAGATGCCTCAGTAGTTC  250

seq1  AAAGCACTTACTTCTCTTTTAGAGGACCCAAGTTCATCTCCCAGCATCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACTTACTTCTCTTTTAGAGGACCCAAGTTCATCTCCCAGCATCCC  300

seq1  AGCATAAACTTAAAAAGAATCTCAGCACAACTGGCAAAATGTACTGGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAAACTTAAAAAGAATCTCAGCACAACTGGCAAAATGTACTGGGAA  350

seq1  GGTTCCGAACACAGGGACAATATTCCTCTTCTATAGAGAAGAATGTCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCGAACACAGGGACAATATTCCTCTTCTATAGAGAAGAATGTCAGA  400

seq1  ACAGAATGTCAGAGCATGATTGAGAACTAAGCCCATGTGACCTTGCAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATGTCAGAGCATGATTGAGAACTAAGCCCATGTGACCTTGCAGTG  450

seq1  TAGCCTTACACTTTTTCCAGGTTTTCTGAGAATCTCATAAAACAAGACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTACACTTTTTCCAGGTTTTCTGAGAATCTCATAAAACAAGACTA  500

seq1  ATTCATCGTTAGAGACATCAGCTCTCTTCCTGCAACCCTTGAACCTAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCGTTAGAGACATCAGCTCTCTTCCTGCAACCCTTGAACCTAGGG  550

seq1  TTTTACCCTAGCAGCCATGACCCTAGTCAGCCTTTGTTCATGCTTGGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCCTAGCAGCCATGACCCTAGTCAGCCTTTGTTCATGCTTGGGTT  600

seq1  GTCAACCCTTTAAGACAGTGGTTCAGAGAGCAGTGCACATAATGACTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACCCTTTAAGACAGTGGTTCAGAGAGCAGTGCACATAATGACTGCA  650

seq1  GGACTCTGAACAGTGACAATCTCTCCCAGAGATTCACAGCCATGCTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCTGAACAGTGACAATCTCTCCCAGAGATTCACAGCCATGCTCTCT  700

seq1  TTGTTATCTCCATTCTAAATAGGATAAACTTCTCTTAATAAACACCAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATCTCCATTCTAAATAGGATAAACTTCTCTTAATAAACACCAACA  750

seq1  CTGTTTTATACTGGCTCATCCTGAAATTCTGTTCCCTAGAGAAGCCGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTATACTGGCTCATCCTGAAATTCTGTTCCCTAGAGAAGCCGAGC  800

seq1  CTCTGCCTCTAACTGAGCACCAGTCCCTGAAAGATCAGGGAGCCCTTCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTCTGCCTCTAACTGAGCACCAGTCCCTGAAAGATCAGGGAGCCCTTCA-  849

seq1  GCCTGTGGAGGTAGCATGGGATAGTACCTGTCCCACTAGCACAGACAGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGGAGGTAGCATGGGATAGTACCTGTCCCACTAGCACAGACAGTT  899

seq1  TGCATTCTGAAAAACAATGTTTACTTTCCAAGGAGTAGAACAAACATGCA  950
      ||||||||| ||||||||| ||||||| ||||||||||||| ||||||||
seq2  TGCATTCTG-AAAACAATG-TTACTTT-CAAGGAGTAGAAC-AACATGCA  945

seq1  TTACCTGTT-GGGAGGGTAGACTCCTCCTTGGACTTTTCTGATAGAAACA  999
      ||| ||||| |||||||||||   || |||||||||||||||||| ||||
seq2  TTATCTGTTGGGGAGGGTAGA--TCTTCTTGGACTTTTCTGATAG-AACA  992

seq1  GTGTCATCTCTCTATTAACTTTTCTCAATACTTCTTGG-ATCATGTGAAT  1048
      ||||||| |||||| ||||||||||| ||||||||||| |||||||||| 
seq2  GTGTCAT-TCTCTA-TAACTTTTCTC-ATACTTCTTGGAATCATGTGAA-  1038

seq1  TTCTAAACT  1057
      |||||||||
seq2  TTCTAAACT  1047