BAC Information

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BAC

Clone NameB6Ng01-029B02
Chromosome10 (Build37)
Map Location 23,917,116 - 23,918,255
singlet/doubletsinglet
Overlap genenone
Upstream geneEya4, Rps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9, Stx7
Downstream geneMoxd1, LOC628537, Ctgf, Enpp1, Enpp3, Crsp3, Arg1, EG667479, LOC212399, Akap7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029B02.bB6Ng01-029B02.g
ACCDH859371DH859372
length1,1321,171
definitionDH859371|Mus musculus domesticus DNA, BAC clone: B6Ng01-029B02, 5' end.DH859372|Mus musculus domesticus DNA, BAC clone: B6Ng01-029B02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcaatttgatgaatagtattaggatgctggagtagatatctca
atgaagagtcagatttcatcattttaaacagattagaaaaattaatataa
ctacagaggaaaccagagaagcctcttactttaaaaccctccttccagtt
ttagctcaaacatcaaaatacaatataagtgtataaagtagtagtgtgtt
cctgtgttgtctctcatgtgaactgcagactcttaactgttaaacacgta
tacctcggtgaggttgaatgtgaatggaaagcagctgactagaaaggggc
ccttgagactgtgatggaggctggacaggacagggtggggacaagagagc
aaagtggaagtgagaatgacaaaggacggggacagggagatggagatgtc
aacaataaataaacaaagagccacagtgaccagacttgactcgattaatt
cataaagatgcacattctctgaaatgaaagaatgctcatttccttaaagc
ttgtgtggaaggcttaagtgcagtgtgtgcacatccctctgctttcagaa
agatttccttaaacatatgcaaaaccagcaaacatcatctacataaaacc
atttttcttaaaattttggtgtaagtaatgttaattggttaaatagcaac
ctagtcagttaatcaacactctcttaatctaaagcatttattttacacaa
tggataccacagtgtcttagagtcccttctttaaaacaaaaatgtggtgt
aaaatgtcatagtgttgcttttagtattttgttcttaccaacatgaagga
gattttctttactacttaagaaatgtgggatttttttcttattcatatca
catccttaatttcacattgagtcatactaaatataccaaattatactgta
ttattggtggcccaaccagcacccacaggacacttgtccactctgtttca
cttacatgtatgagtgttctcacatgtgtgagtgcatggctatgtatgag
tgtcacacatgtgtgagtgcatggctatgtatgagtgtcctgcatgtgtg
agtcatgctatgtatagatcccaccatctggggtgcatggctatgtatga
gtgtccaaccatctgtatgcatggcctatgta
gaattctttgtttagctctgttccccatttttaatagggttatttggttc
tctggaatctaccttcttgagttctttgtatatattggataataaccctc
tatcagatgtaggattggtaaaggttttttcccaatctactggtttccgt
tttgtgttactgacagtgtcctttgccttacagaagctttgcaattttat
gaggtcccatttgtccattggtgatcttagagcatgagccattgatgttc
tgttcaggaaaatttcccctgtgcccatgtactcatggatcttccccaac
tttttcttctattagtttcagtgtctctggttttatgtgaaggtccttga
tccacttggacttgagctttgtacaaggagataagaatgtgttgatctga
attcttctatatgttgacttccagttgaaccagcactatttgttggaaat
gctgtattttttcattggatagttttagctctgttatcaaaaatcaagtg
accataggtgcaagttcgaattttgatgggattatattgaatctgtagat
tgctttcagcaagatggccataaggttcatttctgggtcttcaattcttt
tccattaatctacctcctgtctctgtactaataccatacagttgtatcac
tattgctctgtaatacagcttgaggtcaagaatggtgattcccccaagtt
cttttattgttgagaatagtttttgctatccttctttttttttttttttg
ttattccagatgaatttgcaaattgctatttctaactctatgaagaattg
agttggaattttgatggggattgcattgaaatctgtagattgctttcagc
aagatggctgttttactatattatttcttgccagtccacgagcatgaaga
tcttttcatctcagagatcttcttcatttcttttcttcaagaaacttgaa
gttcttgtcatacagatctttcacttacttggttagaatccacacaaggc
attttatattatttgtgacttattgtggaaggtgtggtttccctaattct
ctgctcagcccggtttatctttgagataggaaggtactggattggtttaa
tcaattaataccgacccttgcgaaatgtttaccggttgggaattctctgg
gtgagaattatgacctggata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_23917116_23918255
seq2: B6Ng01-029B02.b_44_1175

seq1  GAATTCATCAATTTGATGAATAGTATTAGGATGCTGGAGTAGATATCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAATTTGATGAATAGTATTAGGATGCTGGAGTAGATATCTCA  50

seq1  ATGAAGAGTCAGATTTCATCATTTTAAACAGATTAGAAAAATTAATATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAGTCAGATTTCATCATTTTAAACAGATTAGAAAAATTAATATAA  100

seq1  CTACAGAGGAAACCAGAGAAGCCTCTTACTTTAAAACCCTCCTTCCAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGAGGAAACCAGAGAAGCCTCTTACTTTAAAACCCTCCTTCCAGTT  150

seq1  TTAGCTCAAACATCAAAATACAATATAAGTGTATAAAGTAGTAGTGTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCAAACATCAAAATACAATATAAGTGTATAAAGTAGTAGTGTGTT  200

seq1  CCTGTGTTGTCTCTCATGTGAACTGCAGACTCTTAACTGTTAAACACGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTTGTCTCTCATGTGAACTGCAGACTCTTAACTGTTAAACACGTA  250

seq1  TACCTCGGTGAGGTTGAATGTGAATGGAAAGCAGCTGACTAGAAAGGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCGGTGAGGTTGAATGTGAATGGAAAGCAGCTGACTAGAAAGGGGC  300

seq1  CCTTGAGACTGTGATGGAGGCTGGACAGGACAGGGTGGGGACAAGAGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAGACTGTGATGGAGGCTGGACAGGACAGGGTGGGGACAAGAGAGC  350

seq1  AAAGTGGAAGTGAGAATGACAAAGGACGGGGACAGGGAGATGGAGATGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGAAGTGAGAATGACAAAGGACGGGGACAGGGAGATGGAGATGTC  400

seq1  AACAATAAATAAACAAAGAGCCACAGTGACCAGACTTGACTCGATTAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATAAATAAACAAAGAGCCACAGTGACCAGACTTGACTCGATTAATT  450

seq1  CATAAAGATGCACATTCTCTGAAATGAAAGAATGCTCATTTCCTTAAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGATGCACATTCTCTGAAATGAAAGAATGCTCATTTCCTTAAAGC  500

seq1  TTGTGTGGAAGGCTTAAGTGCAGTGTGTGCACATCCCTCTGCTTTCAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGGAAGGCTTAAGTGCAGTGTGTGCACATCCCTCTGCTTTCAGAA  550

seq1  AGATTTCCTTAAACATATGCAAAACCAGCAAACATCATCTACATAAAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCCTTAAACATATGCAAAACCAGCAAACATCATCTACATAAAACC  600

seq1  ATTTTTCTTAAAATTTTGGTGTAAGTAATGTTAATTGGTTAAATAGCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTTAAAATTTTGGTGTAAGTAATGTTAATTGGTTAAATAGCAAC  650

seq1  CTAGTCAGTTAATCAACACTCTCTTAATCTAAAGCATTTATTTTACACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCAGTTAATCAACACTCTCTTAATCTAAAGCATTTATTTTACACAA  700

seq1  TGGATACCACAGTGTCTTAGAGTCCCTTCTTTAAAACAAAAATGTGGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATACCACAGTGTCTTAGAGTCCCTTCTTTAAAACAAAAATGTGGTGT  750

seq1  AAAATGTCATAGTGTTGCTTTTAGTATTTTGTTCTTACCAACATGAAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTCATAGTGTTGCTTTTAGTATTTTGTTCTTACCAACATGAAGGA  800

seq1  GATTTTCTTTACTACTTAAGAAATGTGGGATTTTTTTCTTATTCATATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCTTTACTACTTAAGAAATGTGGGATTTTTTTCTTATTCATATCA  850

seq1  CATCCTTAATTTCACATTGAGTCATACTAAATATACCAAATTATACTGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTAATTTCACATTGAGTCATACTAAATATACCAAATTATACTGTA  900

seq1  TTATTGGTGGCCCAACCAGCACCCACAGGACACTTGTCCACTCTGTTTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGGTGGCCCAACCAGCACCCACAGGACACTTGTCCACTCTGTTTCA  950

seq1  CTTACATGTATGAGTGTTCTCACATGTGTGAGTGCATGGCTATGTATGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATGTATGAGTGTTCTCACATGTGTGAGTGCATGGCTATGTATGAG  1000

seq1  TGTCCACACATGTGTGAGTGCATGGCTATGTATGAGTGTCCTTGCATGTG  1050
      ||| ||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGT-CACACATGTGTGAGTGCATGGCTATGTATGAGTGTCC-TGCATGTG  1048

seq1  TGAGTTCATGGCTATGTATTAGTATCCACACATCTGTGAGTGCATGGCTA  1100
      |||| |||| |||||||| ||| ||||   |||||| | |||||||||||
seq2  TGAG-TCAT-GCTATGTA-TAG-ATCCCACCATCTG-GGGTGCATGGCTA  1093

seq1  TGTATGAGTGTCCACACATCTGTGAGTGCATGG-CTATGTA  1140
      ||||||||||||||  |||||||   ||||||| |||||||
seq2  TGTATGAGTGTCCAACCATCTGT--ATGCATGGCCTATGTA  1132