BAC Information

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BAC

Clone NameB6Ng01-030L23
Chromosome10 (Build37)
Map Location 67,721,228 - 67,844,486
singlet/doubletdoublet
Overlap geneArid5b
Upstream geneNrbf2, Egr2, Gm237, LOC100040081, LOC100039618, Zfp365, Plekhk1, LOC100040136
Downstream gene1700040L02Rik, EG665342, Tmem26, A930033H14Rik, Rhobtb1, LOC100040182, Cdc2a, LOC100039696, EG382371
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030L23.bB6Ng01-030L23.g
ACCDH860560DH860561
length7111,080
definitionDH860560|Mus musculus domesticus DNA, BAC clone: B6Ng01-030L23, 5' end.DH860561|Mus musculus domesticus DNA, BAC clone: B6Ng01-030L23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,721,228 - 67,721,942)(67,843,374 - 67,844,486)
sequence
gaattctactggatagtttcatcatcaggcccagaagggaacttagaagg
cagcatctttgcagggaaatgttcatgacatgagctttatctcatgtagt
caggagagattttattctcgagttccctgactgaattctagctgacccca
ggatgctgccctgactctgcaacaggaccaggctgaaggtcaaccaagga
gagaaatggatgagtaaatacaaatatgcccttcataaagggtatattgc
ctgaagaggctaaaattcatttgcacttccatccttgatgctgggagcat
caatgctaagtttcaccagacaggaaagatctggaagtaagactctgact
catgggacaccagtgtagtggttgaggtgtgaccaggaaagcaatgttgt
ttattattattattattattattattattattattattattataatccat
tactgaacaccaactatgtgtcaggcaggatggcgtttggccaaaatgaa
ggagacaaaactcactgtccttctggtctccatggttacctctgagtata
tagactgggagtgggttgggggagtagagcataagagccagaagttaacg
aaatcacaaacaaggagcgagaaagagctgtacgggggaggggcaaaaga
tcaacttcatggctaagacaggggtagccagggaacgtcttgaaaaacag
aaaaaagtaat
gaattccaacgtgcaatgacaacacatcctttcgacgctaaactatctga
aagaggcgtaatactccctgtgtctccataaaatgataaactttttttga
aagattaattgctccaagagtggcgtttgtgggctccatcaacctgcagg
ttttacagacgatggaagcccacctgggttattttagaccccagtgaacc
aaaagtaaggttgacaatacttcacaaagcaggctgctcaactgttgtcc
caagcccagtccgccccagtttcatgtcttcctacacactgtgtggctgc
ccttaagaagcagaagcctgtatcaaagtaactcccaatcagcatgcttc
catgtagcttggcatccaaggaaggaagcctgggtgtgttaccagctgtc
tcattagctgtgtgacctcgggcaggccatgtcccctccctaaggttcgg
tgggatgagctggatctgatattgtgaatgcacagcttgctcctacttgt
ttacacccctcatggaaggcctgtcactgctgatccaaggaggtatttct
tttctgctgaacctagataagccatctttctcagcaaatggcttcaggaa
atcacttctaattaatcaactccaatgctcagctcgaggactacagacca
cctctgagctcaaggttcccttcttgaatccacatgctcagagacacaaa
cagagatagccgagagccaagacagccccagggactcgagtatggcgcta
tcctaggatcacacagaattggagggccgtgagaacactcagtggccggg
agaatttccagaccatgctgttgtgttcttcagtgtccttcatcctctct
cttctaggtatgtgtgcccagaagctccactcatagcttaagttccagcc
acacccctggaaactgatcactaagaacctctaagctgagtactcaaaac
atgtcatcaacagacgaacatgtcaatcaagatgcactgtcacagaaagg
ccagcttaaacagaatcttgagctcatgcctcactccgataatagtattg
tttaaagaataattcaaggaaccaatgctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_67721228_67721942
seq2: B6Ng01-030L23.b_45_754

seq1  GAATTCTACTGGATAGTTTCATCATCAGGCCCAGAAGGGAACTTAGAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTGGATAGTTTCATCATCAGGCCCAGAAGGGAACTTAGAAGG  50

seq1  CAGCATCTTTGCAGGGAAATGTTCATGACATGAGCTTTATCTCATGTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCTTTGCAGGGAAATGTTCATGACATGAGCTTTATCTCATGTAGT  100

seq1  CAGGAGAGATTTTATTCTCGAGTTCCCTGACTGAATTCTAGCTGACCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAGATTTTATTCTCGAGTTCCCTGACTGAATTCTAGCTGACCCCA  150

seq1  GGATGCTGCCCTGACTCTGCAACAGGACCAGGCTGAAGGTCAACCAAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTGCCCTGACTCTGCAACAGGACCAGGCTGAAGGTCAACCAAGGA  200

seq1  GAGAAATGGATGAGTAAATACAAATATGCCCTTCATAAAGGGTATATTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATGGATGAGTAAATACAAATATGCCCTTCATAAAGGGTATATTGC  250

seq1  CTGAAGAGGCTAAAATTCATTTGCACTTCCATCCTTGATGCTGGGAGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAGGCTAAAATTCATTTGCACTTCCATCCTTGATGCTGGGAGCAT  300

seq1  CAATGCTAAGTTTCACCAGACAGGAAAGATCTGGAAGTAAGACTCTGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCTAAGTTTCACCAGACAGGAAAGATCTGGAAGTAAGACTCTGACT  350

seq1  CATGGGACACCAGTGTAGTGGTTGAGGTGTGACCAGGAAAGCAATGTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGACACCAGTGTAGTGGTTGAGGTGTGACCAGGAAAGCAATGTTGT  400

seq1  TTATTATTATTATTATTATTATTATTATTATTATTATTATTATAATCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTATTATTATTATTATTATTATTATTATTATTATTATAATCCAT  450

seq1  TACTGAACACCAACTATGTGTCAGGCAGGATGGCGTTTGGCCAAAATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAACACCAACTATGTGTCAGGCAGGATGGCGTTTGGCCAAAATGAA  500

seq1  GGAGACAAAACTCACTGTCCTTCTGGTCTCCATGGTTACCTCTGAGTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACAAAACTCACTGTCCTTCTGGTCTCCATGGTTACCTCTGAGTATA  550

seq1  TAGACTGGGAGTGGGTTGGGGGAGTAGAGCAGAAGAGCCAGAAAGTAAAC  600
      ||||||||||||||||||||||||||||||| ||||||||| |||| |||
seq2  TAGACTGGGAGTGGGTTGGGGGAGTAGAGCATAAGAGCCAG-AAGTTAAC  599

seq1  AAAATCACAAACAAGGAGCGAGAAGGAGCTGTACGGGGGAGGGGCAGAGA  650
       ||||||||||||||||||||||| ||||||||||||||||||||| | |
seq2  GAAATCACAAACAAGGAGCGAGAAAGAGCTGTACGGGGGAGGGGCA-AAA  648

seq1  GCGTCAGCTTGATGGCAAGGACATGGGGTAGCCAGGGAAGGTCTGGGGAG  700
      |  ||| ||| ||||| | |||| ||||||||||||||| |||| |  | 
seq2  G-ATCAACTTCATGGCTAAGACA-GGGGTAGCCAGGGAACGTCTTGAAAA  696

seq1  ACAGAAAAAAAGTAA  715
      |||| ||||||||||
seq2  ACAG-AAAAAAGTAA  710

seq1: chr10_67843374_67844486
seq2: B6Ng01-030L23.g_64_1143 (reverse)

seq1  GAGCATTTGTGGTCCTTGTGAAATTAATTCTTATAAAACAATATACTTAT  50
      ||||||| ||  ||||||   |||| |||||  | ||||||||    |||
seq2  GAGCATTGGT--TCCTTG---AATT-ATTCT--TTAAACAATA---CTAT  39

seq1  TAATCGGGAGTGAAGGCATGAGCCTACAAGATGTCCTGTTTTAAAGCTGG  100
      | ||| |||||| ||||||||||   |||||  | ||||||  |||||||
seq2  T-ATC-GGAGTG-AGGCATGAGC--TCAAGA--TTCTGTTT--AAGCTGG  80

seq1  CCTTTTCTGTGACAGTTGCATCTGTGATTGACATGTTCGTCTGTTGATTG  150
      || |||||||||||| ||||||| ||||||||||||||||||||||| ||
seq2  CC-TTTCTGTGACAG-TGCATCT-TGATTGACATGTTCGTCTGTTGA-TG  126

seq1  ACATGTTTTGAGGTTACCTCAGCTTAGAGGTTCTTTAGTGGATCAGTTTC  200
      ||||||||||||  || |||||||||||||||| ||||| ||||||||||
seq2  ACATGTTTTGAG--TA-CTCAGCTTAGAGGTTC-TTAGT-GATCAGTTTC  171

seq1  CAGGGGGTTGTGGCTGGAACTTAAGCTATGAGTGGGGCTTCTGGGCACAA  250
      ||||||  ||||||||||||||||||||||||||| |||||||||||| |
seq2  CAGGGG--TGTGGCTGGAACTTAAGCTATGAGTGGAGCTTCTGGGCAC-A  218

seq1  CATACCTAGAAGAGAGAGGATGAAGGACACTGAAGAACACAACAGCATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCTAGAAGAGAGAGGATGAAGGACACTGAAGAACACAACAGCATGG  268

seq1  TCTGGAAATTCTCCCGGCCACCTGAGTGTTCTCACGGCCCTCCAATTCTG  350
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCTGGAAATTCTCCCGGCCA-CTGAGTGTTCTCACGGCCCTCCAATTCTG  317

seq1  TGTGATCCTAGGATAGCGCCATACTCGAGTCCCTGGGGCTGTCTTGGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCCTAGGATAGCGCCATACTCGAGTCCCTGGGGCTGTCTTGGCTC  367

seq1  TCGGCTATCTCTGTTTGTGTCTCTGAGCATGTGGATTCAAGAAGGGAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCTATCTCTGTTTGTGTCTCTGAGCATGTGGATTCAAGAAGGGAACC  417

seq1  TTGAGCTCAGAGGTGGTCTGTAGTCCTCGAGCTGAGCATTGGAGTTGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTCAGAGGTGGTCTGTAGTCCTCGAGCTGAGCATTGGAGTTGATT  467

seq1  AATTAGAAGTGATTTCCTGAAGCCATTTGCTGAGAAAGATGGCTTATCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAAGTGATTTCCTGAAGCCATTTGCTGAGAAAGATGGCTTATCTA  517

seq1  GGTTCAGCAGAAAAGAAATACCTCCTTGGATCAGCAGTGACAGGCCTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAGCAGAAAAGAAATACCTCCTTGGATCAGCAGTGACAGGCCTTCC  567

seq1  ATGAGGGGTGTAAACAAGTAGGAGCAAGCTGTGCATTCACAATATCAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGGGTGTAAACAAGTAGGAGCAAGCTGTGCATTCACAATATCAGAT  617

seq1  CCAGCTCATCCCACCGAACCTTAGGGAGGGGACATGGCCTGCCCGAGGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCATCCCACCGAACCTTAGGGAGGGGACATGGCCTGCCCGAGGTC  667

seq1  ACACAGCTAATGAGACAGCTGGTAACACACCCAGGCTTCCTTCCTTGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCTAATGAGACAGCTGGTAACACACCCAGGCTTCCTTCCTTGGAT  717

seq1  GCCAAGCTACATGGAAGCATGCTGATTGGGAGTTACTTTGATACAGGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGCTACATGGAAGCATGCTGATTGGGAGTTACTTTGATACAGGCTT  767

seq1  CTGCTTCTTAAGGGCAGCCACACAGTGTGTAGGAAGACATGAAACTGGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTTAAGGGCAGCCACACAGTGTGTAGGAAGACATGAAACTGGGG  817

seq1  CGGACTGGGCTTGGGACAACAGTTGAGCAGCCTGCTTTGTGAAGTATTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACTGGGCTTGGGACAACAGTTGAGCAGCCTGCTTTGTGAAGTATTGT  867

seq1  CAACCTTACTTTTGGTTCACTGGGGTCTAAAATAACCCAGGTGGGCTTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTTACTTTTGGTTCACTGGGGTCTAAAATAACCCAGGTGGGCTTCC  917

seq1  ATCGTCTGTAAAACCTGCAGGTTGATGGAGCCCACAAACGCCACTCTTGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTCTGTAAAACCTGCAGGTTGATGGAGCCCACAAACGCCACTCTTGG  967

seq1  AGCAATTAATCTTTCAAAAAAAGTTTATCATTTTATGGAGACACAGGGAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTAATCTTTCAAAAAAAGTTTATCATTTTATGGAGACACAGGGAG  1017

seq1  TATTACGCCTCTTTCAGATAGTTTAGCGTCGAAAGGATGTGTTGTCATTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACGCCTCTTTCAGATAGTTTAGCGTCGAAAGGATGTGTTGTCATTG  1067

seq1  CACGTTGGAATTC  1113
      |||||||||||||
seq2  CACGTTGGAATTC  1080