BAC Information

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BAC

Clone NameB6Ng01-031K12
Chromosome10 (Build37)
Map Location 104,053,903 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031K12.bB6Ng01-031K12.g
ACCDH861208DH861209
length808825
definitionDH861208|Mus musculus domesticus DNA, BAC clone: B6Ng01-031K12, 5' end.DH861209|Mus musculus domesticus DNA, BAC clone: B6Ng01-031K12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgattcctccaagacatttaacatgaagtgatactggattttt
tcaaaggcatccaatgagatgatcatgtgattttttatatcagtttgttt
atatattgatttacatttgatggactttcatataatgaaccattcctata
tccctcagatgaagcctttcaatcatgttgaatgatggtatgttcttgga
tttggttttcaagaattttattgagtatttttgcattgaaatttataatc
acatttggtctgaaggtctctttctttattgggtcattgaatggtttagg
tatcaaagtaactgaggcttcatagaatgaattaggtagtgttccttctg
tttctgttttatagaaatagtttgaggagtatttggtattagctcttctt
tgaaaattttgtagaattctgtgttgttctatcccttggcccctgagaag
gtccttggggctggagggggtgggggtaagaaaaagcaaaatcaaagaca
cagattctgggagccagatgagaaggagaagcagacttgtttactgttat
agtggagagtgtctttataccctctgcccatgccatgcccccgtttgttt
ctaactgcttacccaaggcatcttttaccagccaattggatgtccaggtc
ataagctctgtctttcttcatttctgcatgtcatgcagttcctcagggtt
agaaaatgcagaagtacctgctatgcttgtgtagagccattgaaagctgc
tagtcatagatggtgactctccctcctacaatctgtacttaaacctttgg
ccctgtga

gaattctcacctgaggaataccaaaaggctgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacagccctgagat
tccatctcacaccagtcagaatgactaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttgttg
ggattgcaagcttgtacaacttctctggaaatcagtctggcggttcctca
gaaaattggacatggtactaccataggatcccgcaatacctctcctgggc
atatatccagaagatatcccaaccagtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccatcaacagaggaatgcatacaaaatatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagagcatcatcctgagtgaggtaacccaatcacaaa
agaactcaaatgatatgtactcaatgacaagtggatattagcccagaaac
ttagtatagcgatatataaggtacaggatgctaaacatatgaaactgaag
aagaaggaagaccaaagtgtggacacttttctccttcttagaattgggaa
caatcacccatagaaggagttacagagataaagtttggagctgagacaaa
ggatggaccatctagagactcccatatccaggatccatcccataattagc
ttccaaacaatgacaccatgtcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-031K12.g_66_536 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          |||||||||||||||||||||||| || ||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAAATGTACCACATATTTTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      |  ||||||||||||| ||||||||||||||||||||||| |||||||||
seq2  TGCATTCCTCTGTTGATGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| ||||||||||||||||||||||||| |||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACTGGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      ||||  ||||||||||||||||||||| ||||||||||| |||||||  |
seq2  TGGGATATCTTCTGGATATATGCCCAGGAGAGGTATTGCGGGATCCTATG  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      ||||||| |||||||||||||||| |||||||||||| ||||||||||| 
seq2  GTAGTACCATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGAGA  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
       ||||||||||| |||||||||| ||||||||||||||||||||||||||
seq2  AGTTGTACAAGCTTGCAATCCCAACAACAATGGAGGAGTGTTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      |||||||||| |||||||||||||||||||||||||||||||||||| ||
seq2  TCCACATCCTTGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGTCA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      |||||||||||||||| ||||||||||||| |||||||||||||||||| 
seq2  TTCTGACTGGTGTGAGATGGAATCTCAGGGCTGTTTTGATTTGCATTTCT  400

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      ||||||||||||||||||||||||||||||||||| ||||| ||| || |
seq2  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGTTTCTCAGCCTTTTG  450

seq1  GTATTCCTCAGGTGAGAATTC  461
      |||||||||||||||||||||
seq2  GTATTCCTCAGGTGAGAATTC  471


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