BAC Information

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BAC

Clone NameB6Ng01-031P17
Chromosome10 (Build37)
Map Location 119,305,434 - 119,468,130
singlet/doubletdoublet
Overlap geneGrip1
Upstream geneDyrk2, LOC668223, LOC100042861, LOC674417, Cand1
Downstream geneHelb, Irak3, Tmbim4, 1190005P17Rik, Hmga2, LOC100042902, Msrb3, LOC100043488, Lemd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031P17.bB6Ng01-031P17.g
ACCDH861447DH861448
length1,1271,087
definitionDH861447|Mus musculus domesticus DNA, BAC clone: B6Ng01-031P17, 5' end.DH861448|Mus musculus domesticus DNA, BAC clone: B6Ng01-031P17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,305,434 - 119,306,572)(119,467,027 - 119,468,130)
sequence
gaattcacatggaaggagaaagcaacacagacacacatacacacacacac
acacacacacacacacacacgtactaaaattattttaaattaccaaaaca
gatgactaattctagatcattatagttcataaatattttagcatagccct
attggcatttaagccagatgaatcttcaatgtatggagctttctatacat
tatacaatattaaacagcatctttggcctctactcacaagatgcaggctg
taacctcccacctagctgtgacaatcaaaaataccccaggtattgtcaga
tgtacccagaaaacaaaccaacaaacatttccagagcatggaacaagaaa
atcaaacctgagttgacaagagctgttcctagaaagcgctatggcagttg
tgtttaggtctgatgaggtactgggagcaggaggagagaagggaacagga
gaaaaacaactgagttgtcttaggtttctctgcagggttctctgccttta
gtacctgcagggcgcatcaaaggcgagcagcaggcccactctatgaaaaa
aagcacaagttaactgtgtagaggggtacccggcactaggttcaaaatca
taatgcatattcaagtgtctaggcttggtgtttcgtcatcgggtttgtgt
tcttggacatggtagagctaacgaggcatcctcctggggagggtagcctc
aggaaggcaagtgtggcttgggggtcactctcccctgtgtctccaggcag
agtccatcactgcctggatggtgacacatctgcacttcccctaccagctt
ctgagcttggcccactgccaaggctaaccaccccgatgatggaatcgctt
cctttagctctctctgcttccctgaccccttcctccagtctgtcttctgg
ttctcctaccttgtctcccgaccggctttactcttagcagccatagtggg
agaaaatgattcataaatgtattattgtcactgtgtgtgggtgtttagac
gtgtggtgtgggggcacagattgccaaggagcgcatgcaggatcaaagtc
agtgcacgtctccgagagatgcattctgagactgattcaagttcaacaga
cttagcaccatgcccttactggagctc
gaattcataatggcagccgctgccatggccaaataggaggtttggagtcg
ggacatagtctttggaaggcatacatgtgcaggtcaatcaaagttcactt
cgatgggaaaaaaaatgatggaattggttttggagtagggttgagtttct
cagagttggagtagcctgagaaaataaagcatctagcgtatccatccatg
gggttgcatccgtccgtggggctgtcctggggccctcagccattgactgc
atcaaaactgtgtaccaaggatgttcacgggagacgtagaaggtttatga
atgaagttaaacttctctacaaaagtgatcgtttctaagtcttaaatgcc
attccaggacctgtgacttggtcatcatcaggacactgattagaagggtc
aattctctatgcctttccagagctgaaacaaccacagactccagaggaga
ggtgcaggcggccctgtgagcagtcctctgtgtgattctttttttttttt
tcttcccccgagacacagtttctctgtgtagccctggctgtcctggaact
cactctgtagaccaggctggccttgaactcagaaatccacctgccttgcc
tcccaagtgctggggactaaaggcatgcatcaccactgccctctctgtgt
gattcttaggtgcactcaagtttgagtgcggttactacaagagaacagtc
atgagacagacagattctccagtgcttgaagcacaacgaagatccagagg
ggaatcataagggagaggctcttcccagtctaggttttagtggcgaaagc
tacttcaaaccacttagcctgggccaataaatataaaacaaacaaataaa
caaacaacttagcttggcctgatagctgaaaacaaacaaataagaaagcc
agatgtttgaagaacagatcagactcaagtaatggctactttggtgtaag
atgaattatacattagcagagaagatttgctatagaagacaatcaaggct
ggacatatttttcaatgcatgagaatccatgaagaagcaaggctagaatc
acagattctacaaacagcgctgctgtttagcaacaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_119305434_119306572
seq2: B6Ng01-031P17.b_45_1171

seq1  GAATTCACATGGAAGGAGAAAGCAACACAGACACACATACACACACACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATGGAAGGAGAAAGCAACACAGACACACATACACACACACAC  50

seq1  ACACACACACACACACACACGTACTAAAATTATTTTAAATTACCAAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACGTACTAAAATTATTTTAAATTACCAAAACA  100

seq1  GATGACTAATTCTAGATCATTATAGTTCATAAATATTTTAGCATAGCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACTAATTCTAGATCATTATAGTTCATAAATATTTTAGCATAGCCCT  150

seq1  ATTGGCATTTAAGCCAGATGAATCTTCAATGTATGGAGCTTTCTATACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCATTTAAGCCAGATGAATCTTCAATGTATGGAGCTTTCTATACAT  200

seq1  TATACAATATTAAACAGCATCTTTGGCCTCTACTCACAAGATGCAGGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAATATTAAACAGCATCTTTGGCCTCTACTCACAAGATGCAGGCTG  250

seq1  TAACCTCCCACCTAGCTGTGACAATCAAAAATACCCCAGGTATTGTCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTCCCACCTAGCTGTGACAATCAAAAATACCCCAGGTATTGTCAGA  300

seq1  TGTACCCAGAAAACAAACCAACAAACATTTCCAGAGCATGGAACAAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCCAGAAAACAAACCAACAAACATTTCCAGAGCATGGAACAAGAAA  350

seq1  ATCAAACCTGAGTTGACAAGAGCTGTTCCTAGAAAGCGCTATGGCAGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAACCTGAGTTGACAAGAGCTGTTCCTAGAAAGCGCTATGGCAGTTG  400

seq1  TGTTTAGGTCTGATGAGGTACTGGGAGCAGGAGGAGAGAAGGGAACAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAGGTCTGATGAGGTACTGGGAGCAGGAGGAGAGAAGGGAACAGGA  450

seq1  GAAAAACAACTGAGTTGTCTTAGGTTTCTCTGCAGGGTTCTCTGCCTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACAACTGAGTTGTCTTAGGTTTCTCTGCAGGGTTCTCTGCCTTTA  500

seq1  GTACCTGCAGGGCGCATCAAAGGCGAGCAGCAGGCCCACTCTATGAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTGCAGGGCGCATCAAAGGCGAGCAGCAGGCCCACTCTATGAAAAA  550

seq1  AAGCACAAGTTAACTGTGTAGAGGGGTACCCGGCACTAGGTTCAAAATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACAAGTTAACTGTGTAGAGGGGTACCCGGCACTAGGTTCAAAATCA  600

seq1  TAATGCATATTCAAGTGTCTAGGCTTGGTGTTTCGTCATCGGGTTTGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCATATTCAAGTGTCTAGGCTTGGTGTTTCGTCATCGGGTTTGTGT  650

seq1  TCTTGGACATGGTAGAGCTAACGAGGCATCCTCCTGGGGAGGGTAGCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGACATGGTAGAGCTAACGAGGCATCCTCCTGGGGAGGGTAGCCTC  700

seq1  AGGAAGGCAAGTGTGGCTTGGGGGTCACTCTCCCCTGTGTCTCCAGGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGCAAGTGTGGCTTGGGGGTCACTCTCCCCTGTGTCTCCAGGCAG  750

seq1  AGTCCATCACTGCCTGGATGGTGACACATCTGCACTTCCCCTACCAGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCATCACTGCCTGGATGGTGACACATCTGCACTTCCCCTACCAGCTT  800

seq1  CTGAGCTTGGCCCACTGCCAAGGCTAACCACCCCGATGATGGAATCGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTTGGCCCACTGCCAAGGCTAACCACCCCGATGATGGAATCGCTT  850

seq1  CCTTTAGCTCTCTCTGCTTCCCTGACCCCTTCCTCCAGTCTGTCTTCTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGCTCTCTCTGCTTCCCTGACCCCTTCCTCCAGTCTGTCTTCTGG  900

seq1  TTCTCCCTACCTTGTCTCCCGACCGGCTTTACTCTTAGGCAGCCATAGTG  950
      |||| |||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTCT-CCTACCTTGTCTCCCGACCGGCTTTACTCTTA-GCAGCCATAGTG  948

seq1  GGAAGGAAAATGATTCATAAATGTATTTATTGTCACTGTGTGTGGGTGTT  1000
      |||  |||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGA--GAAAATGATTCATAAATGTA-TTATTGTCACTGTGTGTGGGTGTT  995

seq1  TAAGACGTGT-GTGTGTGGGCACAGATTGCCAAGGAGCGCATGCAGGGAT  1049
      | |||||||| ||||| |||||||||||||||||||||||||||| ||||
seq2  T-AGACGTGTGGTGTGGGGGCACAGATTGCCAAGGAGCGCATGCA-GGAT  1043

seq1  CAGAGTCAGTGCACGTCT-CGAGAGTATGCATTCTGAAGACTGAGTTCAG  1098
      || ||||||||||||||| |||||| |||||||||| ||||||| |  ||
seq2  CAAAGTCAGTGCACGTCTCCGAGAG-ATGCATTCTG-AGACTGATTCAAG  1091

seq1  GTCACCAGACTTTAGCAACCAATGCCCTTACCTGGAAGCTC  1139
       ||| ||||| ||||||  | ||||||||| |||| |||||
seq2  TTCAACAGAC-TTAGCA--CCATGCCCTTA-CTGG-AGCTC  1127

seq1: chr10_119467027_119468130
seq2: B6Ng01-031P17.g_69_1155 (reverse)

seq1  TTTGTCTGCTAAACAGGCAGCGGCTTGTTTGTAGAATCTGTGATTCTAGC  50
      ||||| ||||||||| ||||||   |||||||||||||||||||||||||
seq2  TTTGT-TGCTAAACA-GCAGCG--CTGTTTGTAGAATCTGTGATTCTAGC  46

seq1  CCTTTGCTTTCTTCATGGATTCTCATGCATGTGGAAAAATATGTCCAAGC  100
      |  |||| |||||||||||||||||||||  | ||||||||||||| |||
seq2  C--TTGC-TTCTTCATGGATTCTCATGCA--TTGAAAAATATGTCC-AGC  90

seq1  CTTTGATTGTCCTGTCTATAGCAAATTCTCTCTGCTTATTGTATAATTCA  150
      | |||||||||   ||||||||||||  ||||||| || |||||||||| 
seq2  C-TTGATTGTC--TTCTATAGCAAATCTTCTCTGC-TAATGTATAATTC-  135

seq1  ATCTTACACAAATGTAGCCATTACTTTGAGTCTGATCTGTTCTTCAAACA  200
      ||||||||| || ||||||||||| |||||||||||||||||||||||||
seq2  ATCTTACACCAAAGTAGCCATTAC-TTGAGTCTGATCTGTTCTTCAAACA  184

seq1  TCTGGGCTTTCTTAATTTGTTTGTTTTCAGCTTATCAGGCCAAGCTAAGT  250
      ||| ||||||||| ||||||||||||||||| ||||||||||||||||||
seq2  TCT-GGCTTTCTT-ATTTGTTTGTTTTCAGC-TATCAGGCCAAGCTAAGT  231

seq1  TGTTTGTTTATTTGTTTGTTTATTATTTATTTGGCCAGGCTAAGTGGTTT  300
      |||||||||||||||||||||  |||||||| | ||||||||||||||||
seq2  TGTTTGTTTATTTGTTTGTTTTATATTTATTGGCCCAGGCTAAGTGGTTT  281

seq1  GAAGTAGC-TTCGCCACTAAAACCTAGACTGGGAAGAGCCTCTCCCTTAT  349
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGCTTTCGCCACTAAAACCTAGACTGGGAAGAGCCTCTCCCTTAT  331

seq1  GATTCCCCTCTGGATCTTCGTTGTGCTTCAAGCACTGGAGAATCTGTCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCCCTCTGGATCTTCGTTGTGCTTCAAGCACTGGAGAATCTGTCTG  381

seq1  TCTCATGACTGTTCTCTTGTAGTAACCGCACTCAAACTTGAGTGCACCTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGACTGTTCTCTTGTAGTAACCGCACTCAAACTTGAGTGCACCTA  431

seq1  AGAATCACACAGAGAGGGCAGTGGTGATGCATGCCTTTAGT-CCCAGCAC  498
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGAATCACACAGAGAGGGCAGTGGTGATGCATGCCTTTAGTCCCCAGCAC  481

seq1  TTGGGAGGCAAGGCAGGTGGATTTCTGAGTTCAAGGCCAGCCTGGTCTAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGGCAAGGCAGGTGGATTTCTGAGTTCAAGGCCAGCCTGGTCTAC  531

seq1  AGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACTGTGTCTCGGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACTGTGTCTCGGG  581

seq1  GGAAGAAAAAAAAAAAAAGAATCACACAGAGGACTGCTCACAGGGCCGCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAAAAAAAAAAAAGAATCACACAGAGGACTGCTCACAGGGCCGCC  631

seq1  TGCACCTCTCCTCTGGAGTCTGTGGTTGTTTCAGCTCTGGAAAGGCATAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCTCTCCTCTGGAGTCTGTGGTTGTTTCAGCTCTGGAAAGGCATAG  681

seq1  AGAATTGACCCTTCTAATCAGTGTCCTGATGATGACCAAGTCACAGGTCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGACCCTTCTAATCAGTGTCCTGATGATGACCAAGTCACAGGTCC  731

seq1  TGGAATGGCATTTAAGACTTAGAAACGATCACTTTTGTAGAGAAGTTTAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGGCATTTAAGACTTAGAAACGATCACTTTTGTAGAGAAGTTTAA  781

seq1  CTTCATTCATAAACCTTCTACGTCTCCCGTGAACATCCTTGGTACACAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTCATAAACCTTCTACGTCTCCCGTGAACATCCTTGGTACACAGT  831

seq1  TTTGATGCAGTCAATGGCTGAGGGCCCCAGGACAGCCCCACGGACGGATG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGCAGTCAATGGCTGAGGGCCCCAGGACAGCCCCACGGACGGATG  881

seq1  CAACCCCATGGATGGATACGCTAGATGCTTTATTTTCTCAGGCTACTCCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCCATGGATGGATACGCTAGATGCTTTATTTTCTCAGGCTACTCCA  931

seq1  ACTCTGAGAAACTCAACCCTACTCCAAAACCAATTCCATCATTTTTTTTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGAGAAACTCAACCCTACTCCAAAACCAATTCCATCATTTTTTTTC  981

seq1  CCATCGAAGTGAACTTTGATTGACCTGCACATGTATGCCTTCCAAAGACT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCGAAGTGAACTTTGATTGACCTGCACATGTATGCCTTCCAAAGACT  1031

seq1  ATGTCCCGACTCCAAACCTCCTATTTGGCCATGGCAGCGGCTGCCATTAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCCGACTCCAAACCTCCTATTTGGCCATGGCAGCGGCTGCCATTAT  1081

seq1  GAATTC  1104
      ||||||
seq2  GAATTC  1087