BAC Information

Click to search

BAC

Clone NameB6Ng01-032I06
Chromosome10 (Build37)
Map Location 94,781,306 - 94,921,280
singlet/doubletdoublet
Overlap geneCradd, Socs2
Upstream geneLOC100041955, Tmcc3, EG667315, 4921537D05Rik, Plxnc1
Downstream geneLOC100042004, D10Ertd322e, Ube2n, Nudt4, EG628119, Eea1, EG432491
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032I06.bB6Ng01-032I06.g
ACCDH861832DH861833
length1,175820
definitionDH861832|Mus musculus domesticus DNA, BAC clone: B6Ng01-032I06, 5' end.DH861833|Mus musculus domesticus DNA, BAC clone: B6Ng01-032I06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,781,306 - 94,782,495)(94,920,292 - 94,921,280)
sequence
gaattcttcctttaaaaggtaagagtccttgtggggtgaggaagacgcaa
accaaatatctgctcaacatcccggacttttatacttggatttttaaaac
agacattaggagacctaagaaaattctgagatataatcagaaaattcagg
tagtttttgttcttttctgtctgaggattggttgagacttgaagttagaa
gaatagagactgagacacaactcagttttactctatatcacttacattca
gtgtatatacaaaaagcaaataactagtacaacacagaaatatcctcggc
agctccaagtatagaaatgaaacaccaaagttaatacacaaacaaggggg
aaaccaagagcctgccagaggagccaagcagaaaactgtaataaaaataa
agttagtttgttcttgaggaaggatgggccgcgtggctaagcgaagggca
ctcctcgcttcttctcaaggcttcctgaccgcagggcaccaaaccagtcc
agggacaaccacaaccaacataagcagaaatctagaaaaggttactgtgt
gcgcgcctcgcaaacgcccggttttccctgagcctgggttgcaaagcctt
ttcagaagcacaagtgtgcctacccagttctgacaccgtgctagagagac
acggaggtcccaggaaacaggactctgggtttgtttgctttttttccaga
gacgttaagttggaaggcatttcagctctgatgctggtccatggttctaa
gcctcccgctcatccccctactccctaaaaaagaacccaacactcacaca
gcttccaattcactaaacctcaacctaatttcaaaatcatattttcatga
aactagacacttataaatatttaaggcttaagtgacagaaagcagttagg
catctacttctttaaatatataacttctaccctaaccttaaacactatat
atatagttattatttttaatatattacacatatatataatacatgatatt
taaatatggtatacggcatatgatgtaataaaatatatacatgtatagat
taaacatttaccactagacctaaggcataatagattttcgatatcaataa
tacttttagagaactcttgtgagcctagaaacctacatggagaagaagaa
aaaaatgactggcaacctcgaatcc
gaattcctgctgaaccggcttctgatccaaatgtgacagccgtccgatgc
agtcagcaaacactccaccttgaattaggacaaggaactgtttgtttcct
tcaagaaccctgtactgataacgctgacaagattgacacactgggttcct
tggaaagtagaaatttttctgagaattgttccagaaaaaaaaaaaaaaag
aaaaaaaaaaaaaaaaaaagaaacaagaagataaaatgctatgcaccaga
ggcggggtagatggttctgtaggtaagagcagttgctaagcaagcatgag
aatctgagttcaaacccccactactcacctaaaaaactgggcgtggcctt
gcaggtgcctgcaaatcccagtgctgttgggagcagagctgggggagata
ttgctgacacttgctggtttccagcatagctctgagtcagagggcctgtc
tcagaggaacaaggcagatcaagatcatgccaagagcaggacatctgatg
acctctggcctccactgctcctcccccacaacttacatacacacatgcac
acatacaaagggaaaaagcaacagtctgcaataaaatctccttccatttt
ggaaagcatcaccacaaaggcctttcaccatttgattgatgagagtgggt
gctcaggattctgttttaataagcaaggctgttcagggatacttcagctg
tgcattcccttccaaagtccaggcgcacacagtcttgatgatgactgatc
caggggctggagacatggctctgtgattccagacgtcttgggtgagtatc
tgtatcccagaaccacatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_94781306_94782495
seq2: B6Ng01-032I06.b_44_1218

seq1  GAATTCTTCCTTTAAAAGGTAAGAGTCCTTGTGGGGTGAGGAAGACGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCTTTAAAAGGTAAGAGTCCTTGTGGGGTGAGGAAGACGCAA  50

seq1  ACCAAATATCTGCTCAACATCCCGGACTTTTATACTTGGATTTTTAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAATATCTGCTCAACATCCCGGACTTTTATACTTGGATTTTTAAAAC  100

seq1  AGACATTAGGAGACCTAAGAAAATTCTGAGATATAATCAGAAAATTCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTAGGAGACCTAAGAAAATTCTGAGATATAATCAGAAAATTCAGG  150

seq1  TAGTTTTTGTTCTTTTCTGTCTGAGGATTGGTTGAGACTTGAAGTTAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTTGTTCTTTTCTGTCTGAGGATTGGTTGAGACTTGAAGTTAGAA  200

seq1  GAATAGAGACTGAGACACAACTCAGTTTTACTCTATATCACTTACATTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGAGACTGAGACACAACTCAGTTTTACTCTATATCACTTACATTCA  250

seq1  GTGTATATACAAAAAGCAAATAACTAGTACAACACAGAAATATCCTCGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATATACAAAAAGCAAATAACTAGTACAACACAGAAATATCCTCGGC  300

seq1  AGCTCCAAGTATAGAAATGAAACACCAAAGTTAATACACAAACAAGGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCAAGTATAGAAATGAAACACCAAAGTTAATACACAAACAAGGGGG  350

seq1  AAACCAAGAGCCTGCCAGAGGAGCCAAGCAGAAAACTGTAATAAAAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAGAGCCTGCCAGAGGAGCCAAGCAGAAAACTGTAATAAAAATAA  400

seq1  AGTTAGTTTGTTCTTGAGGAAGGATGGGCCGCGTGGCTAAGCGAAGGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTTTGTTCTTGAGGAAGGATGGGCCGCGTGGCTAAGCGAAGGGCA  450

seq1  CTCCTCGCTTCTTCTCAAGGCTTCCTGACCGCAGGGCACCAAACCAGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCGCTTCTTCTCAAGGCTTCCTGACCGCAGGGCACCAAACCAGTCC  500

seq1  AGGGACAACCACAACCAACATAAGCAGAAATCTAGAAAAGGTTACTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACAACCACAACCAACATAAGCAGAAATCTAGAAAAGGTTACTGTGT  550

seq1  GCGCGCCTCGCAAACGCCCGGTTTTCCCTGAGCCTGGGTTGCAAAGCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCGCCTCGCAAACGCCCGGTTTTCCCTGAGCCTGGGTTGCAAAGCCTT  600

seq1  TTCAGAAGCACAAGTGTGCCTACCCAGTTCTGACACCGTGCTAGAGAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAGCACAAGTGTGCCTACCCAGTTCTGACACCGTGCTAGAGAGAC  650

seq1  ACGGAGGTCCCAGGAAACAGGACTCTGGGTTTGTTTGCTTTTTTTCCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAGGTCCCAGGAAACAGGACTCTGGGTTTGTTTGCTTTTTTTCCAGA  700

seq1  GACGTTAAGTTGGAAGGCATTTCAGCTCTGATGCTGGTCCATGGTTCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTTAAGTTGGAAGGCATTTCAGCTCTGATGCTGGTCCATGGTTCTAA  750

seq1  GCCT-CCGCTCATCCCCCTACTCCCTAAAAAAAGAACCCAACACTCACAC  799
      |||| ||||||||||||||||||||| |||||||||||||||||||||||
seq2  GCCTCCCGCTCATCCCCCTACTCCCT-AAAAAAGAACCCAACACTCACAC  799

seq1  AGCTTCCAATTCACTAAACCTCAACCTAATTTCAAAATCATATTTTCATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCAATTCACTAAACCTCAACCTAATTTCAAAATCATATTTTCATG  849

seq1  AAACTAGACACTTATAAATATTTAAGGCCTTAAGTGACAGAAAGCAGTTA  899
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AAACTAGACACTTATAAATATTTAAGG-CTTAAGTGACAGAAAGCAGTTA  898

seq1  GGCATCTACTTCTTTAAAATATATAACTTCTACCCTAACCCTAAAACACT  949
      ||||||||||||||| |||||||||||||||||||||| ||| |||||||
seq2  GGCATCTACTTCTTT-AAATATATAACTTCTACCCTAA-CCTTAAACACT  946

seq1  ATATATATAATTATTATATATAATATAATAACACATAATATATAATACAT  999
      ||||||||| ||||||| | |||||| || |||||| |||||||||||||
seq2  ATATATATAGTTATTATTTTTAATAT-ATTACACAT-ATATATAATACAT  994

seq1  GATATATAATATATGGTATACGGCATATGATGTAATAAAATATATACAAT  1049
      ||||| ||| ||||||||||||||||||||||||||||||||||||| ||
seq2  GATATTTAA-ATATGGTATACGGCATATGATGTAATAAAATATATAC-AT  1042

seq1  GTATAGATATACACATTTACCACTAGACCCTAAGGCATAATAGATTTTCA  1099
      |||||||| || ||||||||||||||| ||||||||||||||||||||| 
seq2  GTATAGAT-TAAACATTTACCACTAGA-CCTAAGGCATAATAGATTTTCG  1090

seq1  ATAATCAATAATAACTTTTAAAGAGACTCCTGTGAG-CTAGAAAACTACC  1148
      || ||||||||| ||||||| ||| |||| |||||| ||||||| |||| 
seq2  AT-ATCAATAAT-ACTTTTAGAGA-ACTCTTGTGAGCCTAGAAACCTAC-  1136

seq1  AATGAAGAAGAGAGAAGAGAATGACTGACAAACCTCGAATCC  1190
       ||| |||||| |||| | |||||||| | ||||||||||||
seq2  -ATGGAGAAGA-AGAAAAAAATGACTGGC-AACCTCGAATCC  1175

seq1: chr10_94920292_94921280
seq2: B6Ng01-032I06.g_69_888 (reverse)

seq1  CTATGTGAAATTCTGTTAGGTTAGATTAGCCATCTTTTAAATGTCTTATT  50
                                                        
seq2  --------------------------------------------------  0

seq1  TTATTCTACGCATATGGGTATTTTGCCTGCTTGAGTGAATGTGTGCCTAC  100
                                                        
seq2  --------------------------------------------------  0

seq1  TGCCCCCAGAGCCCAGAAAATGGCATTGGATCCCCTCAGACTGGAGGTAC  150
                                                        
seq2  --------------------------------------------------  0

seq1  AGATGTGTGTGTGAGTCACTATGTGGGTTCTGGGATACAGATACTCACCC  200
                        |||||| |||||||||||||||||||||||||
seq2  ------------------CTATGT-GGTTCTGGGATACAGATACTCACCC  31

seq1  ATGACGTCTGGAATCACAGAGCCATGTCTCCAGCCCCTGGATCAGTCATC  250
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACGTCTGGAATCACAGAGCCATGTCTCCAGCCCCTGGATCAGTCATC  81

seq1  ATCAAGACTGTGTGCGCCTGGACTTTGGAAGGGAATGCACAGCTGAAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGACTGTGTGCGCCTGGACTTTGGAAGGGAATGCACAGCTGAAGTA  131

seq1  TCCCTGAACAGCCTTGCTTATTAAAACAGAATCCTGAGCACCCACTCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGAACAGCCTTGCTTATTAAAACAGAATCCTGAGCACCCACTCTCA  181

seq1  TCAATCAAATGGTGAAAGGCCTTTGTGGTGATGCTTTCCAAAATGGAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCAAATGGTGAAAGGCCTTTGTGGTGATGCTTTCCAAAATGGAAGG  231

seq1  AGATTTTATTGCAGACTGTTGCTTTTTCCCTTTGTATGTGTGCATGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTATTGCAGACTGTTGCTTTTTCCCTTTGTATGTGTGCATGTGTG  281

seq1  TATGTAAGTTGTGGGGGAGGAGCAGTGGAGGCCAGAGGTCATCAGATGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAAGTTGTGGGGGAGGAGCAGTGGAGGCCAGAGGTCATCAGATGTC  331

seq1  CTGCTCTTGGCATGATCTTGATCTGCCTTGTTCCTCTGAGACAGGCCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTTGGCATGATCTTGATCTGCCTTGTTCCTCTGAGACAGGCCCTC  381

seq1  TGACTCAGAGCTATGCTGGAAACCAGCAAGTGTCAGCAATATCTCCCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCAGAGCTATGCTGGAAACCAGCAAGTGTCAGCAATATCTCCCCCA  431

seq1  GCTCTGCTCCCAACAGCACTGGGATTTGCAGGCACCTGCAAGGCCACGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCTCCCAACAGCACTGGGATTTGCAGGCACCTGCAAGGCCACGCC  481

seq1  CAGTTTTTTAGGTGAGTAGTGGGGGTTTGAACTCAGATTCTCATGCTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTTTAGGTGAGTAGTGGGGGTTTGAACTCAGATTCTCATGCTTGC  531

seq1  TTAGCAACTGCTCTTACCTACAGAACCATCTACCCCGCCTCTGGTGCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAACTGCTCTTACCTACAGAACCATCTACCCCGCCTCTGGTGCATA  581

seq1  GCATTTTATCTTCTTGTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTATCTTCTTGTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTT  631

seq1  TTTTTCTGGAACAATTCTCAGAAAAATTTCTACTTTCCAAGGAACCCAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTGGAACAATTCTCAGAAAAATTTCTACTTTCCAAGGAACCCAGT  681

seq1  GTGTCAATCTTGTCAGCGTTATCAGTACAGGGTTCTTGAAGGAAACAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAATCTTGTCAGCGTTATCAGTACAGGGTTCTTGAAGGAAACAAAC  731

seq1  AGTTCCTTGTCCTAATTCAAGGTGGAGTGTTTGCTGACTGCATCGGACGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTTGTCCTAATTCAAGGTGGAGTGTTTGCTGACTGCATCGGACGG  781

seq1  CTGTCACATTTGGATCAGAAGCCGGTTCAGCAGGAATTC  989
      |||||||||||||||||||||||||||||||||||||||
seq2  CTGTCACATTTGGATCAGAAGCCGGTTCAGCAGGAATTC  820