BAC Information

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BAC

Clone NameB6Ng01-032J12
Chromosome10 (Build37)
Map Location 90,494,506 - 90,495,065
singlet/doubletsinglet
Overlap geneApaf1
Upstream geneAnks1b, LOC544719
Downstream gene1200009F10Rik, Slc25a3, Tmpo, LOC100041769
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032J12.bB6Ng01-032J12.g
ACCDH861881DH861882
length555120
definitionDH861881|Mus musculus domesticus DNA, BAC clone: B6Ng01-032J12, 5' end.DH861882|Mus musculus domesticus DNA, BAC clone: B6Ng01-032J12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
caactagattaaatgtcatacaaacatgctctgcccaatggatggtctta
cacaagcctatttttttattagttttttaaattaagaaatccagcttcct
gcaagaactagacctagccccctccccacccgccgccgccacatttgctg
caaatgtacagcttggtcttcatgtgggtcccctaaccagcagatcaggg
cctcagtctctgttccctgccattggatccccttcccctacctgaactgc
ctagggttgggcctcagtgggagaggatgtgcctggtcctgctggaacta
ggttcccccccccccccgcccatgtcccaggttagggtggtacccaagag
gggctccccttctctgaggagaatgggaagaagcaatggagggagaaact
tgtaaagtgggaggggggagctatgatctggatgtaaagtcaataagaga
aaaagaaaggaaggagaaaggaagaaagggagggagggaggaaataaata
aaaaagagagcaagaaatccagcttcctttttgcagaaacaaacaaacaa
aatcc
caggacagccagagctatgtagaaagaaagactctgtctcaaaaagaggg
ggtggaaggagacaggaaggaaggaaagaaagaaagacagggagggaggg
aggaagagaggggggaattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_90494506_90495065
seq2: B6Ng01-032J12.b_45_605

seq1  GAATTCCAACTAGATTAAATGTCATACAAACATGCTCTGCCCAATGGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACTAGATTAAATGTCATACAAACATGCTCTGCCCAATGGATG  50

seq1  GTCTTACACAAGCCTATTTTTTTATTAGTTTTTTAAATTAAGAAATCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTACACAAGCCTATTTTTTTATTAGTTTTTTAAATTAAGAAATCCAG  100

seq1  CTTCCTGCAAGAACTAGACCTAGCCCCCTCCCCACCCGCCGCCGCCACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGCAAGAACTAGACCTAGCCCCCTCCCCACCCGCCGCCGCCACAT  150

seq1  TTGCTGCAAATGTACAGCTTGGTCTTCATGTGGGTCCCCTAACCAGCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCAAATGTACAGCTTGGTCTTCATGTGGGTCCCCTAACCAGCAGA  200

seq1  TCAGGGCCTCAGTCTCTGTTCCCTGCCATTGGATCCCCTTCCCCTACCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGCCTCAGTCTCTGTTCCCTGCCATTGGATCCCCTTCCCCTACCTG  250

seq1  AACTGCCTAGGGTTGGGCCTCAGTGGGAGAGGATGTGCCTGGTCCTGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCCTAGGGTTGGGCCTCAGTGGGAGAGGATGTGCCTGGTCCTGCTG  300

seq1  GAACTAGGTTCCCCCCCCCCCCCGCCCATGTCCCAGGTTAGGGTGGTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAGGTTCCCCCCCCCCCCCGCCCATGTCCCAGGTTAGGGTGGTACC  350

seq1  CAAGAGGGGCTCCCCTTCTCTGAGGAGAATGGGAAGAAGCAATGGAGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGGGGCTCCCCTTCTCTGAGGAGAATGGGAAGAAGCAATGGAGGGA  400

seq1  GAAACTTGTAAAGTGGGAGGGGGGAGCTATGATCTGGATGTAAAGTCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTGTAAAGTGGGAGGGGGGAGCTATGATCTGGATGTAAAGTCAAT  450

seq1  AAGAGAAAAAGAAAGGAAGGAGAAAGGAAGAAAGGGAGGGAGGGAGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAAAAGAAAGGAAGGAGAAAGGAAGAAAGGGAGGGAGGGAGGAAA  500

seq1  GAAA-GAAAAAGAGAGCAAGAAATCCAGCTTCCATTTTGCAGAAACAAAC  549
       |||  ||||||||||||||||||||||||||| ||||||||||||||||
seq2  TAAATAAAAAAGAGAGCAAGAAATCCAGCTTCCTTTTTGCAGAAACAAAC  550

seq1  AAACAAAACCC  560
      |||||||| ||
seq2  AAACAAAATCC  561