BAC Information

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BAC

Clone NameB6Ng01-032L18
Chromosome10 (Build37)
Map Location 93,521,163 - 93,655,644
singlet/doubletdoublet
Overlap geneFgd6, Nr2c1
Upstream gene4930485B16Rik, EG667314, Pctk2, Elk3, LOC100041854, Lta4h, Hal, Amdhd1, Ccdc38, Snrpf, LOC100041873, Ntn4, LOC667338, LOC100041907, Usp44, Metap2, Vezt
Downstream geneNdufa12, EG215472, LOC100041955, Tmcc3, EG667315, 4921537D05Rik, Plxnc1, Cradd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032L18.bB6Ng01-032L18.g
ACCDH861980DH861981
length1,125177
definitionDH861980|Mus musculus domesticus DNA, BAC clone: B6Ng01-032L18, 5' end.DH861981|Mus musculus domesticus DNA, BAC clone: B6Ng01-032L18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,654,497 - 93,655,644)(93,521,163 - 93,521,339)
sequence
gaattccacataagccttttcctgaaatctctcaattagctccatgttct
ccaggcctgggtgatctaaggaatatgatataaaagaatataggtattcc
agttctgagtgttcatttaataattcatgggacagggaggcagaggacag
aggatcaaacagttcatttgacagagatgccccacatacagtgttttgtt
cctttattccataagtgcttgctgaatacaccaacagtgtcttgtagcca
gaaggaactcatcacatctaataaaaaccagaccactgtgtactactaat
attttttctcaaaagcagtgtaatggtttttgtttagctttttcttttct
cttctcttttctttcttttttttctctctctctctctctttccttttttt
ttttttaccattttgcattcaacaacataaaataacctaaaagactaaat
ttaaaagcacccataatccatgaaatatttgcatgttgtgtttgtcaagg
agccacccagatatggccaactttaaaagtatttatgaaattaagaatta
caaacatttttatatttctatcagaaattcataatgaaggaacatgacat
aatctacaaaacgttttgatagtcatatttcacaaaatagaaatatttaa
agtaataccatcaatttatagcttaacttttcaattttacccaaagaaaa
ataaaatcggcaagttggttatgatcaaatggatatacacgtgggctcaa
gtgtgtctcattggtaaagctattgcctgtcctgtataagggcctatgct
ggatccccagtgccacaaagaaaataaaggaaatgagtaaaaatagaaat
acagattattggctcatgtgaagcacatggcctgccctctcccgagtccc
agccctgggcttgtgtgaaacattcaatagtgcacaggttaattatctta
ctcatagcactgagaggagaagcagctcgcttggatatttattagacact
tagaacagaagataccttgtggagtggaggcacagaccctcaagactgtg
catttcctctatcacaactgggagtcgagccccttactgaagaaacagac
gctgaagagaagaggccatcttgcc
caggacagccagggctacacagagaaaccctgtttcgaaaaaccaaaaaa
aaaaaaaagaaagaaattatcaagccccttttgaaattttattattcatt
attgtgtatatatgacagtagtttcgcagtggcctgttgactgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_93654497_93655644
seq2: B6Ng01-032L18.b_48_1172 (reverse)

seq1  GGCAAGATGGGCCTCTTGCTTTCCTTCCAGCGTCTAGTTTTCTGTCAGTA  50
      |||||||| |||||||| ||   ||| ||||||||   ||||| ||||||
seq2  GGCAAGAT-GGCCTCTT-CT---CTT-CAGCGTCT--GTTTCT-TCAGTA  41

seq1  AAGGGGCCTCGAACTCCAGTTTGTGAATAGGGGAAATGCACAGTCCTTGA  100
      |  ||| |||| |||||   ||||| |||| ||||||||||||| |||||
seq2  A--GGGGCTCG-ACTCCCAGTTGTG-ATAGAGGAAATGCACAGT-CTTGA  86

seq1  GGGTCTGTGCCTCCACTCCAC-AGGTATTCTTTCTGTTCCTATGTGTCCT  149
      ||||||||||||||||||||| ||||||   ||||||| ||| |||| ||
seq2  GGGTCTGTGCCTCCACTCCACAAGGTAT--CTTCTGTT-CTAAGTGT-CT  132

seq1  AATAAAATTATCCAAGCGAGCCTGCTTCTTCCTCTCAGTGCTATGAGTAA  199
      ||||||  |||||||||||| ||||||| |||||||||||||||||||||
seq2  AATAAA--TATCCAAGCGAG-CTGCTTC-TCCTCTCAGTGCTATGAGTAA  178

seq1  GATAATTAAACCTTGTGCACTATTGAATGTTTCACACAAGCCCAGGGCTG  249
      |||||||||  | |||||||||||||||||||||||||||||||||||||
seq2  GATAATTAA--CCTGTGCACTATTGAATGTTTCACACAAGCCCAGGGCTG  226

seq1  GGACTCGGGAGAGGGCAGGCCATGTGCTTCACATGAGCCAATAATCTGTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCGGGAGAGGGCAGGCCATGTGCTTCACATGAGCCAATAATCTGTA  276

seq1  TTTCTATTTTTACTCATTTCCTTTATTTTCTTTGTGGCACTGGGGATCCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTTTTACTCATTTCCTTTATTTTCTTTGTGGCACTGGGGATCCA  326

seq1  GCATAGGCCCTTATACAGGACAGGCAATAGCTTTACCAATGAGACACACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGGCCCTTATACAGGACAGGCAATAGCTTTACCAATGAGACACACT  376

seq1  TGAGCCCACGTGTATATCCATTTGATCATAACCAACTTGCCGATTTTATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCCACGTGTATATCCATTTGATCATAACCAACTTGCCGATTTTATT  426

seq1  TTTCTTTGGGTAAAATTGAAAAGTTAAGCTATAAATTGATGGTATTACTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGGGTAAAATTGAAAAGTTAAGCTATAAATTGATGGTATTACTT  476

seq1  TAAATATTTCTATTTTGTGAAATATGACTATCAAAACGTTTTGTAGATTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTTCTATTTTGTGAAATATGACTATCAAAACGTTTTGTAGATTA  526

seq1  TGTCATGTTCCTTCATTATGAATTTCTGATAGAAATATAAAAATGTTTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGTTCCTTCATTATGAATTTCTGATAGAAATATAAAAATGTTTGT  576

seq1  AATTCTTAATTTCATAAATACTTTTAAAGTTGGCCATATCTGGGTGGCTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTAATTTCATAAATACTTTTAAAGTTGGCCATATCTGGGTGGCTC  626

seq1  CTTGACAAACACAACATGCAAATATTTCATGGATTATGGGTGCTTTTAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACAAACACAACATGCAAATATTTCATGGATTATGGGTGCTTTTAAA  676

seq1  TTTAGTCTTTTAGGTTATTTTATGTTGTTGAATGCAAAATGGTAAAAAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTCTTTTAGGTTATTTTATGTTGTTGAATGCAAAATGGTAAAAAAA  726

seq1  AAAAAAGGAAAGAGAGAGAGAGAGAGAAAAAAAAGAAAGAAAAGAGAAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGGAAAGAGAGAGAGAGAGAGAAAAAAAAGAAAGAAAAGAGAAGA  776

seq1  GAAAAGAAAAAGCTAAACAAAAACCATTACACTGCTTTTGAGAAAAAATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAAAAGCTAAACAAAAACCATTACACTGCTTTTGAGAAAAAATA  826

seq1  TTAGTAGTACACAGTGGTCTGGTTTTTATTAGATGTGATGAGTTCCTTCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAGTACACAGTGGTCTGGTTTTTATTAGATGTGATGAGTTCCTTCT  876

seq1  GGCTACAAGACACTGTTGGTGTATTCAGCAAGCACTTATGGAATAAAGGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACAAGACACTGTTGGTGTATTCAGCAAGCACTTATGGAATAAAGGA  926

seq1  ACAAAACACTGTATGTGGGGCATCTCTGTCAAATGAACTGTTTGATCCTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACACTGTATGTGGGGCATCTCTGTCAAATGAACTGTTTGATCCTC  976

seq1  TGTCCTCTGCCTCCCTGTCCCATGAATTATTAAATGAACACTCAGAACTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCTGCCTCCCTGTCCCATGAATTATTAAATGAACACTCAGAACTG  1026

seq1  GAATACCTATATTCTTTTATATCATATTCCTTAGATCACCCAGGCCTGGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACCTATATTCTTTTATATCATATTCCTTAGATCACCCAGGCCTGGA  1076

seq1  GAACATGGAGCTAATTGAGAGATTTCAGGAAAAGGCTTATGTGGAATTC  1148
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGGAGCTAATTGAGAGATTTCAGGAAAAGGCTTATGTGGAATTC  1125

seq1: chr10_93521163_93521339
seq2: B6Ng01-032L18.g_79_255

seq1  CAGGACAGCCAGGGCTACACAGAGAAACCCTGTTTCGAAAAACCAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAGCCAGGGCTACACAGAGAAACCCTGTTTCGAAAAACCAAAAAA  50

seq1  AAAAAAAAGAAAGAAATTATCAAGCCCCTTTTGAAATTTTATTATTCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAGAAAGAAATTATCAAGCCCCTTTTGAAATTTTATTATTCATT  100

seq1  ATTGTGTATATATGACAGTAGTTTCGCAGTGGCCTGTTGACTGTGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTATATATGACAGTAGTTTCGCAGTGGCCTGTTGACTGTGTGTGT  150

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTG  177
      |||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTG  177