BAC Information

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BAC

Clone NameB6Ng01-033F14
Chromosome10 (Build37)
Map Location 26,990,993 - 26,991,531
singlet/doubletsinglet
Overlap geneLama2
Upstream geneL3mbtl3, LOC435208, LOC667572, LOC100040349, Arhgap18
Downstream geneLOC100040385, LOC100040961, LOC100040401, Ptprk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033F14.g
ACCDH862422
length931
definitionDH862422|Mus musculus domesticus DNA, BAC clone: B6Ng01-033F14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctagattagattgaactacagtgtgaggtgttgcattgcaaaaca
aaaagaacaaaaagttctgggagtgcattagcaagcacaatcacccacat
aattacttgcaataaaaattttgaaaatcacggaaacttcacaatttatg
ttacagaattattctttctttcatatgactttgtataaaatgtttattca
taaatgcatcataccaacatatagacattaaagttaaaaaaaagaaggtg
gttttacttgtgcattattcaattttttttcaaatttcaacccttactgc
tcgtttatataatttctgcccattcttcctcctttccttccatgtctttc
ccactcaaactctaattcatgacacttcttgagcgcctggtggggggagg
atgtgtgatgtgtacatattttaagacatgtctatagctttttaaggaca
cacacgatgtagctatactgcccctgggcatatacccagagcactctgct
tcatactgcaaaggtaaagggctcatccatgctcactgatgctctatttc
caatatccacaaaacagaaaatagtctatatatgtgaatatataatatac
atataaaaaatatgtgtatttacacaatgaattattttcagctctcatga
gaaacaaaatcataaaactcataaataagtggatgaaattaaaaaaaaac
gagcattctgagtgatgaagctcattcgcagaaaaacaaatatcatcttt
ttttcttccatatgtggaaattagctttgaatcagatatgtgttattcat
ttagaattccccatagatgttatgaaaatagaaaaggctatggagtgaac
agtgggcttgcaaggaaggaaatagaatggagattataaaggggattaac
ctaatggaagacatgaatgggatgtgaggta
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_26990993_26991531
seq2: B6Ng01-033F14.g_468_998

seq1  ATGTGTATATGTGTACATATTTTAAGACATGTCTATAGCTTTTTAAGGAC  50
      ||||||  ||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGT-GATGTGTACATATTTTAAGACATGTCTATAGCTTTTTAAGGAC  49

seq1  ACACACGATGTAGCTATACTGCCCCTGGGCATATACCCAGAGCACTCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACGATGTAGCTATACTGCCCCTGGGCATATACCCAGAGCACTCTGC  99

seq1  TTCATACTGCAGAGGTAAAGGGCTCATCCATGCTCACTGATGCTCTATTT  150
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTCATACTGCAAAGGTAAAGGGCTCATCCATGCTCACTGATGCTCTATTT  149

seq1  CCAATATCCACAAAACAGAAAATAGTCTATATATGTGAATATATAATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATATCCACAAAACAGAAAATAGTCTATATATGTGAATATATAATATA  199

seq1  CATATAATAAATATGTGTATTTACACAATGAATTATTTTCAGCTCTCATG  250
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAAAAATATGTGTATTTACACAATGAATTATTTTCAGCTCTCATG  249

seq1  AGAAACAAAATCATAAAACTCATAAATAAGTGGATGAAATTAAAAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAAAATCATAAAACTCATAAATAAGTGGATGAAATTAAAAAAAAA  299

seq1  CGAGCATTCTGAGTGATGAAGCTCATTCGCAGAAAAACAAATATCATCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCATTCTGAGTGATGAAGCTCATTCGCAGAAAAACAAATATCATCTT  349

seq1  TTTTTCTTCCATATGTGGAAATTAGCTTTGAATCAGATATGTGTTATTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTCCATATGTGGAAATTAGCTTTGAATCAGATATGTGTTATTCA  399

seq1  TTTAGAA-TACCCATAGAGGTTATGAAAATAGTAAGAGGCTATGGAGTGA  449
      ||||||| | |||||||| ||||||||||||| || ||||||||||||||
seq2  TTTAGAATTCCCCATAGATGTTATGAAAATAG-AAAAGGCTATGGAGTGA  448

seq1  ACAGTGGGCTTGCAAGGGAAGGAAATAGAATGGAGTATTATAAAAGGGGA  499
      ||||||||||||||| ||||||||||||||||||| ||||| ||||||||
seq2  ACAGTGGGCTTGCAA-GGAAGGAAATAGAATGGAG-ATTAT-AAAGGGGA  495

seq1  TTAACCTAAATGGAAGGACAATGAAATGGGATGTGAGGTA  539
      ||||||| ||||||| ||| ||| ||||||||||||||||
seq2  TTAACCT-AATGGAA-GAC-ATG-AATGGGATGTGAGGTA  531