BAC Information

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BAC

Clone NameB6Ng01-033M15
Chromosome10 (Build37)
Map Location 9,768,659 - 9,860,037
singlet/doubletdoublet
Overlap geneLOC100039238
Upstream geneEG666625, LOC666636, E130306M17Rik, LOC666658, LOC620417, Stxbp5
Downstream geneLOC665110, 9130014G24Rik, Rab32, EG382450, Grm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033M15.bB6Ng01-033M15.g
ACCDH862743DH862744
length845820
definitionDH862743|Mus musculus domesticus DNA, BAC clone: B6Ng01-033M15, 5' end.DH862744|Mus musculus domesticus DNA, BAC clone: B6Ng01-033M15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,859,195 - 9,860,037)(9,768,659 - 9,769,479)
sequence
gaattcacttgttccaatagtcactgggaaattcaaaaaatggtgttggc
ttccattgtactttacaatgttcaaagctccctgtgctccctttcttgag
gatactgtgcatcttcctaagccaggccagctcattcatcccacagagat
ctgggtacgctactggagaagagtatctttcccatggagcctatgaagct
actcttcatatataaatatatactggtctggcaaatagatgtggctttcc
aacttttttttttaagtagacaaatatacaacatggaaactgcataaaag
agcacagggaggtagaatttttcttgataatatctatccctttttcatag
ataatgtctatgccacttgagttatctctttgaccctctataatctcaaa
gttgccaatggcaggattggaaattgctatacagacttcctttttttttt
tattgtttgccaagtatttcactccacagtagtctgctagatgtcctgag
catgcaattaattcattagcactttgggcttttgtgtcttctggagtctt
ccagaaaatgcagcattcatggaaggagaaatattttttttccatttttt
attaggtatttagctcatttacatttccaatgctataccaaaagtccccc
atacccacccacccccactcccctacccacccactcccccttttttggcc
ctggcgttcccctgtactggggcatataaagtttgcgtgtccaatggggc
ctctctttccagtgatgggccgactaggccatcttttgaaactatgcaac
tagagtcaagagctccggggaactggttagttcataatgtggttc

gaattctgataggaatcatcatctagaataacaggtacaaggccttcatt
ttcttttaaatctttattcagctcctagaagtcaaggagaatgatgggca
gtctggatgtgtacatcattgagacaagatttctatccacagaatataaa
cataagtgaaaaactccagaagcaaatgattctaatagtgggcagccatg
tgaccccttcacagttctttgaatagcctgtggagaaatacacatgggag
cattttggtctgtttgggtcacttaagggatggcttcactacaaacttga
cattacagctgggccttgagtgctgtagactatgactaggtggagactgg
gataagatcagggagccatgtaagcaaagctgcgaggttcagagcacata
agtctgcaaaacacagctaagtccagtgtgcaggaagggtggaagaaggc
tggaacagcatatatggcaagaaggtggacgggtgagaagaattggtttc
tgagctggtgagcatggttggatttattttgtcaaagtattatgattgag
taaaggggtggaaacaaaagagaattcagggttaaccttgcctagttttc
tttgtgggaggtgtattgtcattgatgtacatatctcacgtcttcagtgc
tgtatagtcaaatcctgttagcccctacctatgggtgagaaaactgtata
tttcacggcacattaatagaaaaaccaggtctgaacccatcacatctgac
tgcagagttgaagggagtcttgaatgctaccttctgtttgacttgatcat
ccatgcagaagtccaagtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_9859195_9860037
seq2: B6Ng01-033M15.b_44_888 (reverse)

seq1  GAACAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGC  50
      |||| ||||||||||||||||||| ||||||||||||||||||||| |||
seq2  GAACCACATTATGAACTAACCAGTTCCCCGGAGCTCTTGACTCTAGTTGC  50

seq1  ATATGTATCAAAAGATGGCCTAGTCGG-CCATCACTGGAAAGAGAGG-CC  98
      ||| || |||||||||||||||||||| ||||||||||||||||||| ||
seq2  ATA-GTTTCAAAAGATGGCCTAGTCGGCCCATCACTGGAAAGAGAGGCCC  99

seq1  CATTGGACACGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGACACGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCC  149

seq1  -AAAAAGGGGGAGTGGGTGGGTAGGGGAGTGGGGGTGGGTGGGTATGGGG  197
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGGGGGAGTGGGTGGGTAGGGGAGTGGGGGTGGGTGGGTATGGGG  199

seq1  GACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAAATACCTAATAAAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAAATACCTAATAAAA  249

seq1  AATGGAAAAAAAATATTTCTCCTTCCATGAATGCTGCATTTTCTGGAAGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAAAAAAATATTTCTCCTTCCATGAATGCTGCATTTTCTGGAAGA  299

seq1  CTCCAGAAGACACAAAAGCCCAAAGTGCTAATGAATTAATTGCATGCTCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGAAGACACAAAAGCCCAAAGTGCTAATGAATTAATTGCATGCTCA  349

seq1  GGACATCTAGCAGACTACTGTGGAGTGAAATACTTGGCAAACAATAAAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATCTAGCAGACTACTGTGGAGTGAAATACTTGGCAAACAATAAAAA  399

seq1  AAAAAAGGAAGTCTGTATAGCAATTTCCAATCCTGCCATTGGCAACTTTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGGAAGTCTGTATAGCAATTTCCAATCCTGCCATTGGCAACTTTG  449

seq1  AGATTATAGAGGGTCAAAGAGATAACTCAAGTGGCATAGACATTATCTAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATAGAGGGTCAAAGAGATAACTCAAGTGGCATAGACATTATCTAT  499

seq1  GAAAAAGGGATAGATATTATCAAGAAAAATTCTACCTCCCTGTGCTCTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGGGATAGATATTATCAAGAAAAATTCTACCTCCCTGTGCTCTTT  549

seq1  TATGCAGTTTCCATGTTGTATATTTGTCTACTTAAAAAAAAAAGTTGGAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAGTTTCCATGTTGTATATTTGTCTACTTAAAAAAAAAAGTTGGAA  599

seq1  AGCCACATCTATTTGCCAGACCAGTATATATTTATATATGAAGAGTAGCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACATCTATTTGCCAGACCAGTATATATTTATATATGAAGAGTAGCT  649

seq1  TCATAGGCTCCATGGGAAAGATACTCTTCTCCAGTAGCGTACCCAGATCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGGCTCCATGGGAAAGATACTCTTCTCCAGTAGCGTACCCAGATCT  699

seq1  CTGTGGGATGAATGAGCTGGCCTGGCTTAGGAAGATGCACAGTATCCTCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGATGAATGAGCTGGCCTGGCTTAGGAAGATGCACAGTATCCTCA  749

seq1  AGAAAGGGAGCACAGGGAGCTTTGAACATTGTAAAGTACAATGGAAGCCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGGAGCACAGGGAGCTTTGAACATTGTAAAGTACAATGGAAGCCA  799

seq1  ACACCATTTTTTGAATTTCCCAGTGACTATTGGAACAAGTGAATTC  843
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATTTTTTGAATTTCCCAGTGACTATTGGAACAAGTGAATTC  845


seq1: chr10_9768659_9769479
seq2: B6Ng01-033M15.g_69_888

seq1  GAATTCTGATAGGAATCATCATCTAGAATAACAGGTACAAGGCCTTCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATAGGAATCATCATCTAGAATAACAGGTACAAGGCCTTCATT  50

seq1  TTCTTTTAAATCTTTATTCAGCTCCTAGAAGTCAAGGAGAATGATGGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTAAATCTTTATTCAGCTCCTAGAAGTCAAGGAGAATGATGGGCA  100

seq1  GTCTGGATGTGTACATCATTGAGACAAGATTTCTATCCACAGAATATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGATGTGTACATCATTGAGACAAGATTTCTATCCACAGAATATAAA  150

seq1  CATAAGTGAAAAACTCCAGAAGCAAATGATTCTAATAGTGGGCAGCCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGTGAAAAACTCCAGAAGCAAATGATTCTAATAGTGGGCAGCCATG  200

seq1  TGACCCCTTCACAGTTCTTTGAATAGCCTGTGGAGAAATACACATGGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCCTTCACAGTTCTTTGAATAGCCTGTGGAGAAATACACATGGGAG  250

seq1  CATTTTGGTCTGTTTGGGTCACTTAAGGGATGGCTTCACTACAAACTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGGTCTGTTTGGGTCACTTAAGGGATGGCTTCACTACAAACTTGA  300

seq1  CATTACAGCTGGGCCTTGAGTGCTGTAGACTATGACTAGGTGGAGACTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACAGCTGGGCCTTGAGTGCTGTAGACTATGACTAGGTGGAGACTGG  350

seq1  GATAAGATCAGGGAGCCATGTAAGCAAAGCTGCGAGGTTCAGAGCACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGATCAGGGAGCCATGTAAGCAAAGCTGCGAGGTTCAGAGCACATA  400

seq1  AGTCTGCAAAACACAGCTAAGTCCAGTGTGCAGGAAGGGTGGAAGAAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGCAAAACACAGCTAAGTCCAGTGTGCAGGAAGGGTGGAAGAAGGC  450

seq1  TGGAACAGCATATATGGCAAGAAGGTGGACGGGTGAGAAGAATTGGTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACAGCATATATGGCAAGAAGGTGGACGGGTGAGAAGAATTGGTTTC  500

seq1  TGAGCTGGTGAGCATGGTTGGATTTATTTTGTCAAAGTATTATGATTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGGTGAGCATGGTTGGATTTATTTTGTCAAAGTATTATGATTGAG  550

seq1  TAAAGGGGTGGAAACAAAAGAGAATTCAGGGTTAACCTTGCCTAGTTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGGGTGGAAACAAAAGAGAATTCAGGGTTAACCTTGCCTAGTTTTC  600

seq1  TTTGTGGGAGGTGTATTGTCATTGATGTACATATCTCACGTCTTCAGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGGAGGTGTATTGTCATTGATGTACATATCTCACGTCTTCAGTGC  650

seq1  TGTATAGTCAAATCCTGTTAGCCCCTACCTATGGGTGAGAAAACTGTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAGTCAAATCCTGTTAGCCCCTACCTATGGGTGAGAAAACTGTATA  700

seq1  TTTCACGGCACATTAATAGAAAAACCAGGTCTGAACCCATCACATCTGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACGGCACATTAATAGAAAAACCAGGTCTGAACCCATCACATCTGAC  750

seq1  TGCAGAGTTGAAGGGTAGTCTTGAATGCTACCTTCTG-TTGACTTGAATC  799
      ||||||||||||||| ||||||||||||||||||||| |||||||| |||
seq2  TGCAGAGTTGAAGGG-AGTCTTGAATGCTACCTTCTGTTTGACTTG-ATC  798

seq1  ATCCAGGCAGAAGTCCAAGTTA  821
      ||||| ||||||||||||||||
seq2  ATCCATGCAGAAGTCCAAGTTA  820


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