BAC Information

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BAC

Clone NameB6Ng01-034A02
Chromosome10 (Build37)
Map Location 104,053,903 - 104,054,428
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034A02.bB6Ng01-034A02.g
ACCDH862890DH862891
length877736
definitionDH862890|Mus musculus domesticus DNA, BAC clone: B6Ng01-034A02, 5' end.DH862891|Mus musculus domesticus DNA, BAC clone: B6Ng01-034A02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagatggtggactccagaaaatcaaataaccccattaaaaaatg
gggctcagagctaaacaaaaattctcacctgatgaatactgaatgcctga
gaagcacctgaaaaaatgcgcagcatctttaatcatcagagaaatgcaaa
tcaaaacaaccctgagattccacctcacaccagtcagaatggctaagatc
aaaaattcaggtaacagcagaagctggcgaggatgtggagaacgaggaac
actccttcattgttggtgggattgcaagcttgtacaaccactctggaaat
cagtctggcggttcctcagaaaattggacatagtactaccggaggattct
gcaatacctctcctgggcttatatccagaaaatgtcccaaccggtaagaa
ggacacatgctccactatgttcatagcagccttatttataatagccagaa
gctggaaagaacccagatgcccctcaacagaggaatggataaaaaaaaaa
tgtggtacattcacacaatggagtactactcaactattaaaaagaatgaa
tttatgaaattcctaggcaaatggttggacctggagggcatcatcctgag
tgaggtaacacaatcacaaaacaactcaaatgatatgtactcactgataa
gtggatattagcccagaaacttagtatagtgagatataagatacaatttg
caaaacacatgagactgaagaagaatgaagaccaaagtggggacactttg
cccttcttaggattggaaacaatcacccatggaaaggagttacagagaca
aagtttggagctgaaacaaaggatggactatctagaaactgccattatca
ggggtcatccatatagctcaaactctg

gaattcatgatattcttaggcaaatggatgaaactagaaattatcatcct
gagtgaggtaaccagttacacaagaacacacatggtatgcactcgctgat
aagtggatattagccccaaaacctggaatccccaagatacaattcacaga
ccacatggagctcaagaaaagggaagaacagagtgtggcttcttcggttc
ttcttagaagggggaaaatgctcatgagtgcaaatatgaagacaaaatat
gggtcagagactgaaggaaaggccatccagagaattcctcactttgtgat
ccatcccatatatagacactaaacccagatactgtggcagaagcaatgaa
tgcttgctgactctagcctgatatagctgtttcctgagaggctctgccag
tgcctgacaaatacagagttggatacttgcagccaaccatgggactgagc
aaggagtccccaatggagcagttataaaaaggactaacaaagctgaaagg
gtttggaaccccataggaagaacaacaatattaaccaacaagaccacccc
taattcccaaagtctaaaccacaaaacaaagtgcacacatggagcaaccc
attgctgcagctgcatatgtggcagaagagggtcttcttggccatcaatg
ggagaagtggtccagtgaatgctcaataccccagtgtgggtgaatacgta
ggcagggaggaaagagtgggtgtgtgtgttgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054428
seq2: B6Ng01-034A02.b_48_584 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACA--TTTTCTG  38
      ||||||||          ||||||||||| |||||||||||  |||| | 
seq2  TTTAATAGTTGAGTAGTACTCCATTGTGTGAATGTACCACATTTTTTTTT  50

seq1  TATCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTA  88
      |||| ||||||||||||||||||||||||||||||||||||| |||||||
seq2  TATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTA  100

seq1  TTATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCG  138
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCG  150

seq1  GTTGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTC  188
      |||||| ||| ||||||||||| |||||| ||||||||||| | ||||||
seq2  GTTGGGACATTTTCTGGATATAAGCCCAGGAGAGGTATTGCAGAATCCTC  200

seq1  CGGTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGA  238
      |||||||||||||||||||||||||| |||||||||||| ||||||||||
seq2  CGGTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGA  250

seq1  GTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTT  288
      |||||||||||||| ||||||||||||||||||| ||||||||||||| |
seq2  GTGGTTGTACAAGCTTGCAATCCCACCAACAATGAAGGAGTGTTCCTCGT  300

seq1  TCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGC  338
      ||||||||||||||||||| |||||||| |||||||||||||||||||||
seq2  TCTCCACATCCTCGCCAGCTTCTGCTGTTACCTGAATTTTTGATCTTAGC  350

seq1  CATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTT  400

seq1  CCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATT  438
      | ||||||||||| |||| ||  |||||||||||||||||||| | ||||
seq2  CTCTGATGATTAAAGATGCTGCGCATTTTTTCAGGTGCTTCTCAGGCATT  450

seq1  CGGTATTCCTCAGGTGAGAATTCTTTGTTCAGTTCTGAGCCCCATTTTTT  488
      | |||||| ||||||||||||| |||||| || |||||||||||||||||
seq2  CAGTATTCATCAGGTGAGAATT-TTTGTTTAGCTCTGAGCCCCATTTTTT  499

seq1  AATAGGGTTATTTGATTTTCTGAAGTCCACCTTCTTGA  526
      ||| |||||||||||||||||| |||||||| ||||||
seq2  AATGGGGTTATTTGATTTTCTGGAGTCCACCATCTTGA  537


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