BAC Information

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BAC

Clone NameB6Ng01-034C06
Chromosome10 (Build37)
Map Location 28,639,992 - 28,641,094
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040961, LOC100040401, Ptprk, E430004N04Rik
Downstream gene4930519F09Rik, 2310057J18Rik, LOC432447, 6330407J23Rik, Echdc1, Rnf146, Rspo3, EG630389, Rpl12, LOC623064
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034C06.bB6Ng01-034C06.g
ACCDH862986DH862987
length1,0801,191
definitionDH862986|Mus musculus domesticus DNA, BAC clone: B6Ng01-034C06, 5' end.DH862987|Mus musculus domesticus DNA, BAC clone: B6Ng01-034C06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctaactttagtacctcagggtgttatgtatttaacgtagaaag
tttttttccttaaacatactaaattactggaactcgtcagatggcttggt
gtctacgaagaatcgctactcattatgacatagactcacaaatattttta
tttatttattttttgaatcaaacaagtttaattcatttccctttcacatc
acatttacatttctgtttggatacatctttacatccacttggttactttt
gaagcaccttatggttatacattaccatataataaaacaacattggaatc
attataggaagtacagagaacccaccaccccctgatgtactgggaacaga
cagagagcttacatactggttgtgactacaaggagtggatacaaatacaa
tagataaggtaaatttctaaatcaaagtattcctatgctattgttgaaaa
gctgcctatctgtccattgaatctttcatattgttgaagaggaggataca
cttcctgatctcaatgatatcactaaggaagacctacggcgcctctgact
atggtaagagagcctccgaacagtttaaatatttttttttttcatgtgaa
tacttttttttaaaaatgctggtagcttccccctatctttgaaatttatc
gttcctatgtcatagcaaacacagctcatttttctcaggttcaaggtggc
aaggggtgaagtgatacacctttctttacactcttgtttgaatgctctac
atacagccactagcgttcctgttgcaccgtgtccagaaaaaggtgacata
cttttgctttgagttagagattacattgaagagtgatggctggcttcagg
ttgcttttcttatgcatattatgctttgcagtggtgtgtcttgtagctct
tggcatgaagtctccagcacagaagacaatgcaggagtcttcacaatgga
gccagctggggagaatgattaaaaaacctacactgctcactgatatagct
tttggtaacatacacaagacctacaaattatgaaagaaccccggtcattt
aatcaagccgtggatttagacatttgttta
gaattcctaaatttatacatgtgaggttgagtctttggctgaatgaagac
tgcaattagggctctataaatatgcatatttcatgggctcattgcactaa
gataaaacagaggtttcaaatagatttgctagaagggaaaacatcacttc
tgggctggctgtgaaatcaccgtctgataactggggtcataaactgggaa
tggacaatttattgtagaaacaaggacagaagataaaatattgaatggat
ttatttctacaaaatttcaaaactaatgagacactagacctcttgacaaa
accatgctaatatataacaataaactcttaataagcctgtggatcattag
tgacagataataaatatttaataaaataactagtcttactataaacacat
gttaacactagtgttgtgactacttaatcaatggatgatttgaatttatt
ttttaattttgtgaacttttgaaaaaagatgtgaagatgttcatgtaatc
atgtatcctgagaaagtataagaactatgaaagacaacaatgaaagagca
gagcagagacagcaggcaggcttctttgtattatgaagtggggtttttct
tgccagcaggcttgttcttactgacaaggtcagggccttcttagatttct
ttccttcagcaataaaaagtagaagcttttttttttcttctgagcaacag
gttggaaggttggagctgatttcttctccaaagtgaatgagctttgtctg
cattggtgcttgcttaatggaacttgcttatgggagttttgttccatcca
caaaattttacacacacacacacacacacacacacacacacacacacaca
cacacacacaaacacttatgtaagtattggtgtgtaggtatgtgcgtgta
agtatgcatgagtattgtggagtgattgagacagatggatgatcctaata
aaaatgaaatactggtatgaatggggtatatctattctttttcttggtga
aacatgcattgcctttcgggagcatgctttcttttcctggggccaaagag
ctattctccagcctcctctgccgtcaaaaagatgtagtccaaagtagggg
aaaatcagaatacattattcttatttactttcctggggttgcactgaata
gccaataaatcggtcctggtacttatggacctaatttaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_28639992_28641094
seq2: B6Ng01-034C06.b_46_1125

seq1  GAATTCTCTAACTTTAGTACCTCAGGGTGTTATGTATTTAACGTAGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAACTTTAGTACCTCAGGGTGTTATGTATTTAACGTAGAAAG  50

seq1  TTTTTTTCCTTAAACATACTAAATTACTGGAACTCGTCAGATGGCTTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCCTTAAACATACTAAATTACTGGAACTCGTCAGATGGCTTGGT  100

seq1  GTCTACGAAGAATCGCTACTCATTATGACATAGACTCACAAATATTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACGAAGAATCGCTACTCATTATGACATAGACTCACAAATATTTTTA  150

seq1  TTTATTTATTTTTTGAATCAAACAAGTTTAATTCATTTCCCTTTCACATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTTTTTGAATCAAACAAGTTTAATTCATTTCCCTTTCACATC  200

seq1  ACATTTACATTTCTGTTTGGATACATCTTTACATCCACTTGGTTACTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTACATTTCTGTTTGGATACATCTTTACATCCACTTGGTTACTTTT  250

seq1  GAAGCACCTTATGGTTATACATTACCATATAATAAAACAACATTGGAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCACCTTATGGTTATACATTACCATATAATAAAACAACATTGGAATC  300

seq1  ATTATAGGAAGTACAGAGAACCCACCACCCCCTGATGTACTGGGAACAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGGAAGTACAGAGAACCCACCACCCCCTGATGTACTGGGAACAGA  350

seq1  CAGAGAGCTTACATACTGGTTGTGACTACAAGGAGTGGATACAAATACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGCTTACATACTGGTTGTGACTACAAGGAGTGGATACAAATACAA  400

seq1  TAGATAAGGTAAATTTCTAAATCAAAGTATTCCTATGCTATTGTTGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAAGGTAAATTTCTAAATCAAAGTATTCCTATGCTATTGTTGAAAA  450

seq1  GCTGCCTATCTGTCCATTGAATCTTTCATATTGTTGAAGAGGAGGATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCTATCTGTCCATTGAATCTTTCATATTGTTGAAGAGGAGGATACA  500

seq1  CTTCCTGATCTCAATGATATCACTAAGGAAGACCTACGGCGCCTCTGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGATCTCAATGATATCACTAAGGAAGACCTACGGCGCCTCTGACT  550

seq1  ATGGTAAGAGAGCCTCCGAACAGTTTAAATA-TTTTTTTTTTCATGTGAA  599
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATGGTAAGAGAGCCTCCGAACAGTTTAAATATTTTTTTTTTTCATGTGAA  600

seq1  TACTTTTTTTTAAAAATGCTGGTAGCTTCCCCCTATCTTTGAAATTTATC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTTTTAAAAATGCTGGTAGCTTCCCCCTATCTTTGAAATTTATC  650

seq1  GTTCCTATGTCATAGCAAACACAGCTCA-TTTTCTCAGGTTCAAGGTGGC  698
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GTTCCTATGTCATAGCAAACACAGCTCATTTTTCTCAGGTTCAAGGTGGC  700

seq1  AAGGGGTGAAGTGATACACCTTTCTTTACACTCTTGTTTGAATGCTCTAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGTGAAGTGATACACCTTTCTTTACACTCTTGTTTGAATGCTCTAC  750

seq1  ATACAGCCACTAGCGTTCCTGTGGCACCGTGTCCAGAAAAAGGTGACATA  798
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATACAGCCACTAGCGTTCCTGTTGCACCGTGTCCAGAAAAAGGTGACATA  800

seq1  CTTTTGCTTTTGAGTTAGAGATTACATTTGAAGAGTTGATGGCTGGCTTC  848
      ||||||| |||||||||||||||||| |||||||| ||||||||||||||
seq2  CTTTTGC-TTTGAGTTAGAGATTACA-TTGAAGAG-TGATGGCTGGCTTC  847

seq1  AGGTTTGCTTTTCTTATGCATATTATTGCTTTGCAGTGGTGGTGTCCTCT  898
      ||| ||||||||||||||||||||| |||||||||||||| |||||   |
seq2  AGG-TTGCTTTTCTTATGCATATTA-TGCTTTGCAGTGGT-GTGTC--TT  892

seq1  GTAGGCTC-TGGCATGAAGTCTCCCAGCACAGAAGACAAATGCAGGAGTC  947
      ||| |||| ||||||||||||| |||||||||||||| ||||||||||||
seq2  GTA-GCTCTTGGCATGAAGTCT-CCAGCACAGAAGAC-AATGCAGGAGTC  939

seq1  TTCACAAT-GAGCCAAGCTGGGGAGAATGAGTAAAAAATACCCTACACCT  996
      |||||||| ||||| ||||||||||||||| |||||||   |||||| ||
seq2  TTCACAATGGAGCC-AGCTGGGGAGAATGATTAAAAAA---CCTACA-CT  984

seq1  GCTCA-TGATTATAGCTTCTGTTAACATACACACAAACCCTACAATTATA  1045
      ||||| ||| |||||||| || ||||||  ||||||  |||||||  || 
seq2  GCTCACTGA-TATAGCTTTTGGTAACAT--ACACAAGACCTACAA--ATT  1029

seq1  TTGAAAGACCCCTGTTCATTTAATTCAAGCACGTGTGATTTTAGAGCATA  1095
       ||||||| ||| | |||||||| |||||| |||| |||||   || | |
seq2  ATGAAAGAACCCCGGTCATTTAA-TCAAGC-CGTG-GATTT---AG-ACA  1072

seq1  TTTGTTTA  1103
      ||||||||
seq2  TTTGTTTA  1080