BAC Information

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BAC

Clone NameB6Ng01-034D22
Chromosome10 (Build37)5 (Build37)
Map Location 104,053,911 - 104,054,36387,177,396 - 87,178,516
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034D22.bB6Ng01-034D22.g
ACCDH863054DH863055
length7861,102
definitionDH863054|Mus musculus domesticus DNA, BAC clone: B6Ng01-034D22, 5' end.DH863055|Mus musculus domesticus DNA, BAC clone: B6Ng01-034D22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,911 - 104,054,363)(87,177,396 - 87,178,516)
sequence
gaattctcacctgaggaatactgaatggcagagaagcacctgaaaaaaat
gttcaacatccttaataatcagggaaatgtgaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatgaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaagaggaatactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaatcagttgggcagttcctc
agaaaattggatatagtactactggaggatcccgcaatagctctcctcag
catatatccagaagatgtcccaaccggtaagaaggacacatgctccacta
tgttcatagcagcattatttaaaatagccagaagctggaaagaacccaga
tgcccctcaaccgaggaatggatacaaaaaatgtggtacatttacacaat
ggagtactactcagcttttaaaaagaatgaatggcatggacctggagggc
atcatcctgaggtaacccaatcaatcacaaaggaactcgcacaatgtgta
ctcactgataagtggatattagcccagaaacttaggatacagaagatata
agatacaatttgctaaacgcatgaaactgaagaagaacgaagaccaaagt
gtggacactttgccccttcctagaaatgggaacaaaatacccatggaagg
agttacagagacaaaatttggagctgtgacgaaaggatggaccatctagt
gattgccattatccagggatccatcccatatcagct
gaattctagagagtaagacgagcagagtagagtcatgacagtggctatag
aacgggatgctccagatgggcaatgagtgggtacaggggctgacatcaaa
accacagtggattgatgactcgagtaaaggtaaacactgtctgtagaaaa
ccacatgtatcatccggaagatctcccagggccagcatttgttagtgata
gatagatctggattgaaccggaaaaagacttaagtcatatacctatacac
acacacaaatgaatgtgtgagacattcaccactcttgtctcctaactaca
gagcaaaattacagaagttaagtagtggagagaggagggatagctcagag
tcaggacttgttccagtatccctatatcaccttaagtgacagattttttt
cttctagtgtctttttattattattattattctctcaataatgaaactgt
gtaactttgttttccatgctattcttgtttccaaggacttcaaaaccaaa
gttgtagctctatcaagcaaatgtcttaaaccagatctagagcacatttg
attttccacttttttctccatttcctgacaatttgactaagatgtcattc
atttcagatgagtgtctcatccctgaggagcagactcaaaccatcaggct
tggtggcctgtgcctttacctattagatgatttcgcctagtctgatttct
taattttaacaccatctatacatttatacataaaatgaagggaatagatt
cacaaatggcaacatctttgcttatccagatatctcattcactcactagt
ttaacaatatcggtcaacctgtaacatacatcccaataaactgcccagcg
gaaacattgctttattattagagtgctataacttcagaatattttaatag
cttccagaaattatcagattgtcataggtatcataggtatcacgggtatc
attaaatttatcatattatcttagcattaagaactggtatgagcgagggg
tatttagcagtgataaacatcacctcagactagccatgggcactatactc
ctgacgctgtggacaatggtatgctgtaaactgttaagtgcataatggac
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053911_104054363
seq2: B6Ng01-034D22.b_45_498 (reverse)

seq1  CTCCATTGTGTAAATGTACCACATTTTCTGTATCTATTCCTCTGTTGAGG  50
      ||||||||||||||||||||||||||| |||||| ||||||| |||||||
seq2  CTCCATTGTGTAAATGTACCACATTTTTTGTATCCATTCCTCGGTTGAGG  50

seq1  GGCATCTGGGTTCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCTATG  100
      |||||||||||||||||||||| ||||||||| ||||||| |||||||||
seq2  GGCATCTGGGTTCTTTCCAGCTTCTGGCTATTTTAAATAATGCTGCTATG  100

seq1  AATATAGTGGAGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCTGGATA  150
      || ||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AACATAGTGGAGCATGTGTCCTTCTTACCGGTTGGGACATCTTCTGGATA  150

seq1  TATGCCCAGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATT  200
      |||||  || |||| |||||| ||||||||| |||||||||| |||||||
seq2  TATGCTGAGGAGAGCTATTGCGGGATCCTCCAGTAGTACTATATCCAATT  200

seq1  TTCTGACGAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAA  250
      |||||| |||| |||  || |||||||||||||||||||||||| |||||
seq2  TTCTGAGGAACTGCCCAACTGATTTCCAGAGTGGTTGTACAAGCTTGCAA  250

seq1  TCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCA  300
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCCCACCAACAATGGAGGAGTATTCCTCTTTCTCCACATCCTCGCCAGCA  300

seq1  TCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGT  350
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCTGCTGTCACCTGAATTTTTCATCTTAGCCATTCTGACTGGTGTGAGGT  350

seq1  GGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTT  400
      |||||||||||||||||||||||  |||||||||||| ||||||||||||
seq2  GGAATCTCAGGGTTGTTTTGATTCACATTTCCCTGATTATTAAGGATGTT  400

seq1  GAACA-TTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGA  449
      ||||| |||||||||||||||||||||||||| |||||||||||||||||
seq2  GAACATTTTTTTCAGGTGCTTCTCTGCCATTCAGTATTCCTCAGGTGAGA  450

seq1  ATTC  453
      ||||
seq2  ATTC  454

seq1: chr5_87177396_87178516
seq2: B6Ng01-034D22.g_65_1166 (reverse)

seq1  TTGTCCATCTATGCACTTAACAGTTTTACAGCAATGACCATCTGGTGCCA  50
      |||||||| |||||||||||||| |||||||||   ||||| ||   |||
seq2  TTGTCCAT-TATGCACTTAACAG-TTTACAGCA--TACCAT-TG--TCCA  43

seq1  CAAGCGTCAGAAGTATAGTGCCACTGTGGCTAGTCTGAGGTGATGTTTAT  100
      | |||||||| ||||||||||  |  ||||||||||||||||||||||||
seq2  C-AGCGTCAGGAGTATAGTGC--CCATGGCTAGTCTGAGGTGATGTTTAT  90

seq1  CACTGCTTAAATACCCCCTCGCTCATACCAAGTTCTTTAATGCT-AGATA  149
      |||||| |||||| ||||||||||||||| ||||| |||||||| |||||
seq2  CACTGC-TAAATA-CCCCTCGCTCATACC-AGTTC-TTAATGCTAAGATA  136

seq1  ATATGATTAAATTTTAATGATACCCGTGATACCTATGATTACCTATGACA  199
      |||||||  || |||||||||||||||||||||||||| |||||||||||
seq2  ATATGAT--AAATTTAATGATACCCGTGATACCTATGA-TACCTATGACA  183

seq1  ATCTGATTAATTTCTGGAAGCTATTAAAATTATTCTGAAGTTATAGCACT  249
      |||||| |||||||||||||||||||||| ||||||||||||||||||||
seq2  ATCTGA-TAATTTCTGGAAGCTATTAAAA-TATTCTGAAGTTATAGCACT  231

seq1  CTAATAATAAAGCAATGTTTCCTGCTGGGCAGTTTATTGGGATGTATGTT  299
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTAATAATAAAGCAATGTTTCC-GCTGGGCAGTTTATTGGGATGTATGTT  280

seq1  ACAGGTTGACCGATATTGTTAAACTAGTGAGTGAATGAGATATCTGGATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTTGACCGATATTGTTAAACTAGTGAGTGAATGAGATATCTGGATA  330

seq1  AGCAAAGATGTTGCCATTTGTGAATCTATTCCCTTCATTTTATGTATAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGATGTTGCCATTTGTGAATCTATTCCCTTCATTTTATGTATAAA  380

seq1  TGTATAGATGGTGTTAAAATTAAGAAATCAGACTAGGCGAAATCATCTAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAGATGGTGTTAAAATTAAGAAATCAGACTAGGCGAAATCATCTAA  430

seq1  TAGGTAAAGGCACAGGCCACCAAGCCTGATGGTTTGAGTCTGCTCCTCAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAAAGGCACAGGCCACCAAGCCTGATGGTTTGAGTCTGCTCCTCAG  480

seq1  GGATGAGACACTCATCTGAAATGAATGACATCTTAGTCAAATTGTCAGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAGACACTCATCTGAAATGAATGACATCTTAGTCAAATTGTCAGGA  530

seq1  AATGGAGAAAAAAGTGGAAAATCAAATGTGCTCTAGATCTGGTTTAAGAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGAAAAAAGTGGAAAATCAAATGTGCTCTAGATCTGGTTTAAGAC  580

seq1  ATTTGCTTGATAGAGCTACAACTTTGGTTTTGAAGTCCTTGGAAACAAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTTGATAGAGCTACAACTTTGGTTTTGAAGTCCTTGGAAACAAGA  630

seq1  ATAGCATGGAAAACAAAGTTACACAGTTTCATTATTGAGAGAATAATAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATGGAAAACAAAGTTACACAGTTTCATTATTGAGAGAATAATAAT  680

seq1  AATAATAAAAAGACACTAGAAGAAAAAAATCTGTCACTTAAGGTGATATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAAAAAGACACTAGAAGAAAAAAATCTGTCACTTAAGGTGATATA  730

seq1  GGGATACTGGAACAAGTCCTGACTCTGAGCTATCCCTCCTCTCTCCACTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATACTGGAACAAGTCCTGACTCTGAGCTATCCCTCCTCTCTCCACTA  780

seq1  CTTAACTTCTGTAATTTTGCTCTGTAGTTAGGAGACAAGAGTGGTGAATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACTTCTGTAATTTTGCTCTGTAGTTAGGAGACAAGAGTGGTGAATG  830

seq1  TCTCACACATTCATTTGTGTGTGTGTATAGGTATATGACTTAAGTCTTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACACATTCATTTGTGTGTGTGTATAGGTATATGACTTAAGTCTTTT  880

seq1  TCCGGTTCAATCCAGATCTATCTATCACTAACAAATGCTGGCCCTGGGAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGTTCAATCCAGATCTATCTATCACTAACAAATGCTGGCCCTGGGAG  930

seq1  ATCTTCCGGATGATACATGTGGTTTTCTACAGACAGTGTTTACCTTTACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCGGATGATACATGTGGTTTTCTACAGACAGTGTTTACCTTTACT  980

seq1  CGAGTCATCAATCCACTGTGGTTTTGATGTCAGCCCCTGTACCCACTCAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTCATCAATCCACTGTGGTTTTGATGTCAGCCCCTGTACCCACTCAT  1030

seq1  TGCCCATCTGGAGCATCCCGTTCTATAGCCACTGTCATGACTCTACTCTG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATCTGGAGCATCCCGTTCTATAGCCACTGTCATGACTCTACTCTG  1080

seq1  CTCGTCTTACTCTCTAGAATTC  1121
      ||||||||||||||||||||||
seq2  CTCGTCTTACTCTCTAGAATTC  1102