BAC Information

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BAC

Clone NameB6Ng01-034M06
Chromosome10 (Build37)
Map Location 104,053,903 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034M06.bB6Ng01-034M06.g
ACCDH863423DH863424
length663972
definitionDH863423|Mus musculus domesticus DNA, BAC clone: B6Ng01-034M06, 5' end.DH863424|Mus musculus domesticus DNA, BAC clone: B6Ng01-034M06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggaatactagcccaaaac
ctagatacccacgatatagatacaatttcctaaacacatgaaactcagaa
aatgaagactgaa

gaattcaaaagtagtgttttgtttggtggaggaagtccagagacagcatt
caggctatgacatgactactgctctctaatttcatctaggtgtgcaatga
gaaagcagcaagtggaccagaaagataggaaaaaatgcacagtttgctga
gaaagaaaggaaaaatggggttaaagttacaaacaaagcttgtactaaga
aaacactgatgatccctaagcatactagcactgttaaagagaagcctcct
gctccacattaagacaatggaaaaggtccctggagggcaggagcctacct
ttcaaagattctaacttgtgaaaaatgcaaatttacttgaaaggagagaa
actgaactgcaaacagtgccagggaggtattctgctcaaaaacacctgcc
tgcgaaagtgttttctcaattttggctgaagacacagagaaacgtggcaa
agggggaccatactaaatctccagatggcagcagatcttggcagagtcat
gcacttggtgctggtttggcaagcatgcaaaatccaagcgttctggaggt
caggaggctcacattacaagtctgtgaagtcactgatagcaggcaacgtg
tggcagcatctgatgccctgcaatgggaggcttgagagaccactgcatga
aggtgaatcttgtgttgtagtagaaacactagggtgctggagatgtcaag
accaagcaatgtgtattaaggatgggagaaaacatacagtggagcaagtc
taaaagagaggctatgcgtgcttcagacagcagagctggggtaggggtgg
ggttgtgcatgctgttgagtccagtcctttttccaaggacttagatccca
gcaatgggagctgttgctcatgcggttggaccctgcttgcatggtctcat
gctggattcattccttcttcgggaactgaaattactttgtgattggttcg
cggaagtagtgactgtgcttcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-034M06.b_46_516 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          |||||||||||| |||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAGATGTACCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || ||||||||||||||||||||||||||||||||||| | |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGTTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| |||||||||||||||||||||||||| ||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCAGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||||| |||||||||||||||||||| ||||||||||||||||||||||
seq2  TGGGGCTTCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATCCTCCG  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  GTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  400

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  450

seq1  GTATTCCTCAGGTGAGAATTC  461
      |||||||||||||||||||||
seq2  GTATTCCTCAGGTGAGAATTC  471


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