BAC Information

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BAC

Clone NameB6Ng01-034O02
Chromosome10 (Build37)
Map Location 100,598,542 - 100,599,457
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3, 4930430F08Rik, 1700017N19Rik
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034O02.b
ACCDH863503
length908
definitionDH863503|Mus musculus domesticus DNA, BAC clone: B6Ng01-034O02, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccatattactgtgtaacatagaattattatcagtaagatattt
cttagcatcagtagtaatcatgccagaccaaaaaaatataattcctaatg
ttatcagagcccttgtagaatattaattttatacgttattagttaattgt
tcatcttgttataaatattataaaattactattagcactaagataaaatt
taaatattgtctaattaaacgctcatccctccaaataatggttttagaaa
gcataacagttgtttcaataaaatgcttaattttaaattattcttcataa
taccaaccaacagtttgtatagatcatgttatcctgaaaatatctctcac
atattatttgagatgactgtgcaatcttcttgtactttcaggaaattgaa
aatacagttttctttacattttacttttggggaaattttcaagctgatca
taagttcatagggcatttgaaagcaattatgtttctagccaactcaagaa
gaatcaatatagtaagaaattaaatgactgaattgttaaaagtttaaaga
aatcagccacttaaatgattgtcaaaatactaaggcattgctaagcaagt
gggattcactctgaaatgcacaatggtgagtttctgtaagtcttgagatg
ctagactggacaaagagcaaatcaaatctcatggaaacatatatgacatc
actcatagaaggagtccctgtcctctgagagcttttatctagcagatgac
tggaacaaatcagatacccaaaccaaattttgggcagaattagggacttt
atagaaaagttggagaaggattgaaggccatggagtgtcagggaactccc
caggaaagcatagagtcaactaactgggcctgggagctatcagagactaa
gatacaac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_100598542_100599457
seq2: B6Ng01-034O02.b_44_951 (reverse)

seq1  GTTGTTATCTTAGTCTCTGATAGCTCCCAGGGCCCAGGTTAGTTGACTCT  50
      |||| |||||||||||||||||||||||| |||||| |||||||||||||
seq2  GTTG-TATCTTAGTCTCTGATAGCTCCCA-GGCCCA-GTTAGTTGACTCT  47

seq1  ATTGCTTTTCCTGTGGAGTTCCCTGTACACTCCATGGCCTTCAATCCTTC  100
      | ||| ||||||| ||||||||||| ||||||||||||||||||||||||
seq2  A-TGC-TTTCCTGGGGAGTTCCCTG-ACACTCCATGGCCTTCAATCCTTC  94

seq1  TCCAAACTCTTCTATAAAAGTCCCTAACTCTGCCCAAAATTTGGCTCTGG  150
      ||| |||| |||||| ||||||||||| |||||||||||||||| | |||
seq2  TCC-AACTTTTCTAT-AAAGTCCCTAATTCTGCCCAAAATTTGG-TTTGG  141

seq1  GTATCTGTATCTGTTCCAGTCATCTGCTAGATAAAAGCTCTCAGAGGACA  200
      ||||||| || |||||||||||||||||||||||||||||||||||||||
seq2  GTATCTG-ATTTGTTCCAGTCATCTGCTAGATAAAAGCTCTCAGAGGACA  190

seq1  -GGACTCCTTCTATGAGTGATGTCATATATGTTTCCATGAGATTTGATTT  249
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTCCTTCTATGAGTGATGTCATATATGTTTCCATGAGATTTGATTT  240

seq1  GCTCTTTGTCCAGTCTAGCATCTCAAGACTTACAG-AACTCACCATTGTG  298
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GCTCTTTGTCCAGTCTAGCATCTCAAGACTTACAGAAACTCACCATTGTG  290

seq1  CATTTCAGAGTGAATCCCACTTGCTTAGCAATGCCTTAGTATTTTGACAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCAGAGTGAATCCCACTTGCTTAGCAATGCCTTAGTATTTTGACAA  340

seq1  TCATTTAAGTGGCTGATTTCTTTAAACTTTTAACAATTCAGTCATTTAAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAAGTGGCTGATTTCTTTAAACTTTTAACAATTCAGTCATTTAAT  390

seq1  TTCTTACTATATTGATTCTTCTTGAGTTGGCTAGAAACATAATTGCTTTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTACTATATTGATTCTTCTTGAGTTGGCTAGAAACATAATTGCTTTC  440

seq1  AAATGCCCTATGAACTTATGATCAGCTTGAAAATTTCCCCAAAAGTAAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCCTATGAACTTATGATCAGCTTGAAAATTTCCCCAAAAGTAAAA  490

seq1  TGTAAAGAAAACTGTATTTTCAATTTCCTGAAAGTACAAGAAGATTGCAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGAAAACTGTATTTTCAATTTCCTGAAAGTACAAGAAGATTGCAC  540

seq1  AGTCATCTCAAATAATATGTGAGAGATATTTTCAGGATAACATGATCTAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATCTCAAATAATATGTGAGAGATATTTTCAGGATAACATGATCTAT  590

seq1  ACAAACTGTTGGTTGGTATTATGAAGAATAATTTAAAATTAAGCATTTTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTGTTGGTTGGTATTATGAAGAATAATTTAAAATTAAGCATTTTA  640

seq1  TTGAAACAACTGTTATGCTTTCTAAAACCATTATTTGGAGGGATGAGCGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACAACTGTTATGCTTTCTAAAACCATTATTTGGAGGGATGAGCGT  690

seq1  TTAATTAGACAATATTTAAATTTTATCTTAGTGCTAATAGTAATTTTATA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAGACAATATTTAAATTTTATCTTAGTGCTAATAGTAATTTTATA  740

seq1  ATATTTATAACAAGATGAACAATTAACTAATAACGTATAAAATTAATATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATAACAAGATGAACAATTAACTAATAACGTATAAAATTAATATT  790

seq1  CTACAAGGGCTCTGATAACATTAGGAATTATATTTTTTTGGTCTGGCATG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAGGGCTCTGATAACATTAGGAATTATATTTTTTTGGTCTGGCATG  840

seq1  ATTACTACTGATGCTAAGAAATATCTTACTGATAATAATTCTATGTTACA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTACTGATGCTAAGAAATATCTTACTGATAATAATTCTATGTTACA  890

seq1  CAGTAATATGGTGAATTC  916
      ||||||||||||||||||
seq2  CAGTAATATGGTGAATTC  908