BAC Information

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BAC

Clone NameB6Ng01-035D23
Chromosome10 (Build37)
Map Location 93,038,133 - 93,236,191
singlet/doubletdoublet
Overlap geneCcdc38, Snrpf, LOC100041873, Ntn4, LOC667338
Upstream geneLOC100041814, Nedd1, Gm872, 4930485B16Rik, EG667314, Pctk2, Elk3, LOC100041854, Lta4h, Hal, Amdhd1
Downstream geneLOC100041907, Usp44, Metap2, Vezt, Fgd6, Nr2c1, Ndufa12, EG215472, LOC100041955, Tmcc3, EG667315, 4921537D05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035D23.bB6Ng01-035D23.g
ACCDH863767DH863768
length467605
definitionDH863767|Mus musculus domesticus DNA, BAC clone: B6Ng01-035D23, 5' end.DH863768|Mus musculus domesticus DNA, BAC clone: B6Ng01-035D23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,235,726 - 93,236,191)(93,038,133 - 93,038,724)
sequence
gaattccaggactgataggtttatgtagagagaccctgtcccccatctta
cccaacccccgctccccaaaacaaagaaacagaaaaaccaagaaaaaaaa
aacataaaaatgactactttcattactatggtagtttattttgtttctta
agcgggtttcatgtatcccaggctagcgtggaactcatcattatgttatg
aagatgaccttgaactcctgaccttcctatctttttgagacagagtttag
ctctatagctctggctgtcctgaactcactgtgtagaccagaatgtcctc
aaacttgcaaagctcctcctgtccccttagggctgaggggacaatcatat
gccaccacgcacagcagctgaagatgatttcaactgtgcaggatgttggg
cttgctcaatatgactttcttttgatccaagtaagaatgggttggtttca
aaagtaagtttggagcc
gaattcaattccgatgctcaggtaccttcttggcctgtggtaactttatt
ttgtctcccggtaatgatctggcctccctgggtgctgagcacttgacaca
cggggagagttagggcaatccataaattgttgacggggtgtggaaaacca
gtgcgtggaattattttgtcaatatggaagaatcgtccagggggttcacg
tgaaatgttgttctagttatttcaaatggcccttctttgttgctatgttg
tgtgtgatatagtttattcgttttgatggcaaattcatgtgaccactcaa
tgacagaacatgtcatgaacctacacacttaatactgcatggaaaaattg
gccccaagcacagagcctaaaaatatgtgtcaacttcttttgggcttaaa
ataaattgggcttggtctccagcaccccatgaaacatcctcacacctttt
attttactgataggttcaccctctcccaacctgcaggcaaagcccctcca
cacaaggacaatcctaaacttctttgttagggacctcagccaaaacctcc
cttaagggccgagccccaaaaaaggtttgttgaatgaatgatcaggttag
tttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_93235726_93236191
seq2: B6Ng01-035D23.b_44_510 (reverse)

seq1  GGCTCCAAACTTACTTTTGAAACCAACCCATTCTTACTTGTATCAAAAG-  49
      |||||||||||||||||||||||||||||||||||||||| |||||||| 
seq2  GGCTCCAAACTTACTTTTGAAACCAACCCATTCTTACTTGGATCAAAAGA  50

seq1  AAGTCATATTGAGCAAG-CCAACAGTCCTGCACAGTTGAAATCATCTTCA  98
      ||||||||||||||||| |||||| |||||||||||||||||||||||||
seq2  AAGTCATATTGAGCAAGCCCAACA-TCCTGCACAGTTGAAATCATCTTCA  99

seq1  GCTGCTGTGCGTGGTGGCATATGATTGTCCCCTCAGCCCTAAGGGGACAG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGTGCGTGGTGGCATATGATTGTCCCCTCAGCCCTAAGGGGACAG  149

seq1  GAGGAGCTTTGCAAGTTTGAGGACATTCTGGTCTACACAGTGAGTTCAGG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGCTTTGCAAGTTTGAGGACATTCTGGTCTACACAGTGAGTTCAGG  199

seq1  ACAGCCAGAGCTATAGAGCTAAACTCTGTCTCAAAAAGATAGGAAGGTCA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCAGAGCTATAGAGCTAAACTCTGTCTCAAAAAGATAGGAAGGTCA  249

seq1  GGAGTTCAAGGTCATCTTCATAACATAATGATGAGTTCCACGCTAGCCTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTCAAGGTCATCTTCATAACATAATGATGAGTTCCACGCTAGCCTG  299

seq1  GGATACATGAAACCCGCTTAAGAAACAAAATAAACTACCATAGTAATGAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACATGAAACCCGCTTAAGAAACAAAATAAACTACCATAGTAATGAA  349

seq1  AGTAGTCATTTTTATGTTTTTTTTTTCTTGGTTTTTCTGTTTCTTTGTTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTCATTTTTATGTTTTTTTTTTCTTGGTTTTTCTGTTTCTTTGTTT  399

seq1  TGGGGAGCGGGGGTTGGGTAAGATGGGGGACAGGGTCTCTCTACATAAAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGCGGGGGTTGGGTAAGATGGGGGACAGGGTCTCTCTACATAAAC  449

seq1  CTATCAGTCCTGGAATTC  466
      ||||||||||||||||||
seq2  CTATCAGTCCTGGAATTC  467

seq1: chr10_93038133_93038724
seq2: B6Ng01-035D23.g_66_670

seq1  GAATTCAATTCCGATGCTCAGGTACCTTCTTGGCCTGTGGTAACTTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTCCGATGCTCAGGTACCTTCTTGGCCTGTGGTAACTTTATT  50

seq1  TTGTCTCCCGGTAATGATCTGGCCTCCCTGGGTGCTGAGCACTTGACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCCCGGTAATGATCTGGCCTCCCTGGGTGCTGAGCACTTGACACA  100

seq1  CGGGGAGAGTTAGGGCAATCCATAAATTGTTGACGGGGTGTGGAAAACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGAGAGTTAGGGCAATCCATAAATTGTTGACGGGGTGTGGAAAACCA  150

seq1  GTGCGTGGAATTATTTTGTCAATATGGAAGAATCGTCCAGGGGGTTCACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGTGGAATTATTTTGTCAATATGGAAGAATCGTCCAGGGGGTTCACG  200

seq1  TGAAATGTTGTTCTAGTTATTTCAAATGGCCCTTCTTTGTTGCTATGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGTTGTTCTAGTTATTTCAAATGGCCCTTCTTTGTTGCTATGTTG  250

seq1  TGTGTGATATAGTTTATTCGTTTTGATGGCAAATTCATGTGACCACTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGATATAGTTTATTCGTTTTGATGGCAAATTCATGTGACCACTCAA  300

seq1  TGACAGAACATGTCATGAACCTACACACTTAATACTGCATGG-AAAATTG  349
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGACAGAACATGTCATGAACCTACACACTTAATACTGCATGGAAAAATTG  350

seq1  G-CCCAAGCACAGAGCCT-AGAATATGTGTCAACTTC-TTTGGGCTT-AA  395
      | |||||||||||||||| | |||||||||||||||| ||||||||| ||
seq2  GCCCCAAGCACAGAGCCTAAAAATATGTGTCAACTTCTTTTGGGCTTAAA  400

seq1  ATAGATT-GGCTT-GTCTCCCAGCA-CCCATGACACATCCTCACACC-TT  441
      ||| ||| ||||| |||| |||||| ||||||| ||||||||||||| ||
seq2  ATAAATTGGGCTTGGTCT-CCAGCACCCCATGAAACATCCTCACACCTTT  449

seq1  TATTTTACTGATAGGTTCA-CCTCTCCC-AGCTGCATGCAGAG-CCCTCC  488
      ||||||||||||||||||| |||||||| | ||||| ||| || ||||||
seq2  TATTTTACTGATAGGTTCACCCTCTCCCAACCTGCAGGCAAAGCCCCTCC  499

seq1  ACACAAGGACCATCCT-AACTTC-TTGTTAGTGAACTCAGTCCAGAGCTC  536
      |||||||||| ||||| |||||| ||||||| || ||||| | | | |||
seq2  ACACAAGGACAATCCTAAACTTCTTTGTTAGGGACCTCAGCCAAAACCTC  549

seq1  CCTTAAGTGTCGATGCTCAATAAATGTTTGTTGAATGAATGATCAGGTTA  586
      ||||||| | |||  | ||| ||| |||||||||||||||||||||||||
seq2  CCTTAAGGGCCGAGCCCCAAAAAAGGTTTGTTGAATGAATGATCAGGTTA  599

seq1  GTTTAC  592
      ||||||
seq2  GTTTAC  605