BAC Information

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BAC

Clone NameB6Ng01-035L22
Chromosome10 (Build37)
Map Location 26,860,317 - 27,018,413
singlet/doubletdoublet
Overlap geneLama2
Upstream geneSamd3, L3mbtl3, LOC435208, LOC667572, LOC100040349, Arhgap18
Downstream geneLOC100040385, LOC100040961, LOC100040401, Ptprk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035L22.bB6Ng01-035L22.g
ACCDH864133DH864134
length9901,007
definitionDH864133|Mus musculus domesticus DNA, BAC clone: B6Ng01-035L22, 5' end.DH864134|Mus musculus domesticus DNA, BAC clone: B6Ng01-035L22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,860,317 - 26,861,336)(27,017,362 - 27,018,413)
sequence
gaattcaattagttctctaaacagcactcccctgagcacttaatggaggg
gaaaccattaagagacgcttgtaaacaaaggggaagaagtgcagagaggg
atttttttttttttttgataggacaagcagttaatggtaagctgccatat
cccttcacagggatctaacagtcccagcagggcttttaataaatcagctc
cttgcgggtggccagtacaagtgtagcttgtcatctgagttactctgcaa
attcctgacattttacaagtgagtgaacatgtctcgggaggcaggggcag
aagtctagagctagaaccatgcctcttacagtccctgctagaaggaaaga
gaatttttgcatcagagaaacaaagtaaaaggaagaaagagcagtgactt
ctacacactcttgggcagtatgagcttcaggagaccaaatgtcagcattt
ggctattgtagaaaacatatcgcaaggtctgatgacgtgctggccagtat
aaagatgtaaagatccccagtgtggttctcagacttcacgtggtgtctga
accactggaagggcttttagaacttcagggacacggcaacattttgggtt
tgtgattctggaggtgataggatgtcatgttctctgctacttatggtgag
aatgtacttgcttgacaagctcaaaggagacatttgtactgctggtttgg
gagcagcactgtggtaacaggtagaccaggagtcttggcatcacctggga
gcttaatagacaagcagagccttgatctatgctagaccctacaagtcaca
gctgcattttaggaagaaaattccatgtaacccacatagaaaagactggc
gtctgctgagacagtggttctcacttggatgtacagcagatagcagattc
acagtgtgctctgactggcttccctttcatttctagacttggttatatgt
catgaaaatcagccatcagtattctaaagattcagctgat
gaattctttttcaaatacagaaaaacatcaacctttcatcgtgagttcgg
tcattttaatgcaagaacagaaaatgagagtaataaatcagagcttaaag
ccctgaaatttgaactagattaatacacataatgttcccaaatccattat
ttcagaagacattaagagcagattcacattactgcagatggcatcccaat
taactcctaatatatcaaaaacaagattatttgtagtaataaaatgatat
ttgaactgaactatcttactctattgtgaaaaagttcagtgcttcttctc
tgaactcaacacagcttaacctaaggaacagtgttttgatgaccttataa
tgaccttagatactctcatgtccttacacacagcagctgttcagcagcct
tactgtatctagtaacattgactaaatcttaatttaaaaacctttgtatc
cattaagtgtagttgtgaaaactataaagcctcttacgaaaagcaggaaa
gatatttggttgtaaaaaactatatttgcaatataaaaatatctttgcaa
tataaaacagtaataggacctaaattgaaataatgattttttaaatattt
ttcagtaacattcattaaatgcctaatactacccagcactttctgaaact
tgatataatgaagacattgtggttattataacattgccatatatagtcag
aggtaaataaatagaattatgctgacctaggtatagaaatattataattg
gagacagatgaaattgtgttttggttcgtttgtttgtttgtttacttcag
aaacaatggtaactcaatctctgggcacacactagactcctatcttgtaa
gagcacatactctaaatctctgtgcaatctgcagattgcatagaactggg
agaaactaggagctacatctctgctatccctcatagctcttcatttctgc
tactgtcttcctgtccactggagtctgctacccccaggatggtctttatt
cattagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_26860317_26861336
seq2: B6Ng01-035L22.b_46_1035

seq1  GAATTCAATTAGTTCTCTAAACAGCACTCCCCTGAGCACTTAATGGAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTAGTTCTCTAAACAGCACTCCCCTGAGCACTTAATGGAGGG  50

seq1  GAAACCATTAAGAGACGCTTGTAAACAAAGGGGAAGAAGTGCAGAGAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCATTAAGAGACGCTTGTAAACAAAGGGGAAGAAGTGCAGAGAGGG  100

seq1  ATTTTTTTTTTTTTTTTGATAGGACAAGCAGTTAATGGTAAGCTGCCATA  150
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-TTTTTTTTTTTTTTTGATAGGACAAGCAGTTAATGGTAAGCTGCCATA  149

seq1  TCCCTTCACAGGGATCTAACAGTCCCAGCAGGGCTTTTAATAAATCAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCACAGGGATCTAACAGTCCCAGCAGGGCTTTTAATAAATCAGCT  199

seq1  CCTTGCGGGTGGCCAGTACAAGTGTAGCTTGTCATCTGAGTTACTCTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCGGGTGGCCAGTACAAGTGTAGCTTGTCATCTGAGTTACTCTGCA  249

seq1  AATTCCTGACATTTTACAAGTGAGTGAACATGTCTCGGGAGGCAGGGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTGACATTTTACAAGTGAGTGAACATGTCTCGGGAGGCAGGGGCA  299

seq1  GAAGTCTAGAGCTAGAACCATGCCTCTTACAGTCCCTGCTAGAAGGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCTAGAGCTAGAACCATGCCTCTTACAGTCCCTGCTAGAAGGAAAG  349

seq1  AGAATTTTTGCATCAGAGAAACAAAGTAAAAGGAAGAAAGAGCAGTGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTTTGCATCAGAGAAACAAAGTAAAAGGAAGAAAGAGCAGTGACT  399

seq1  TCTACACACTCTTGGGCAGTATGAGCTTCAGGAGACCAAATGTCAGCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACACACTCTTGGGCAGTATGAGCTTCAGGAGACCAAATGTCAGCATT  449

seq1  TGGCTATTGTAGAAAACATATCGCAAGGTCTGATGACGTGCTGGCCAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTATTGTAGAAAACATATCGCAAGGTCTGATGACGTGCTGGCCAGTA  499

seq1  TAAAGATGTAAAGATCCCCAGTGTGGTTCTCAGACTTCACGTGGTGTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATGTAAAGATCCCCAGTGTGGTTCTCAGACTTCACGTGGTGTCTG  549

seq1  AACCACTGGAAGGGCTTTTAGAACTTCAGGGACACGGCAACATTTTGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTGGAAGGGCTTTTAGAACTTCAGGGACACGGCAACATTTTGGGT  599

seq1  TTGTGATTCTGGAGGTGATAGGATGTCATGTTCTCTGCTACTTATGGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATTCTGGAGGTGATAGGATGTCATGTTCTCTGCTACTTATGGTGA  649

seq1  GAATGTACTTGCTTGACAAGCTCAAAGGAGACATTTGTACTGCTGGTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTACTTGCTTGACAAGCTCAAAGGAGACATTTGTACTGCTGGTTTG  699

seq1  GGAGCAGCACTGTGGTAACAGGTAGACCAGGAGTCTTGGCATCACCTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGCACTGTGGTAACAGGTAGACCAGGAGTCTTGGCATCACCTGGG  749

seq1  AGCTTAATAGACAAGCAGAGCCTTGATCTATGCTAGACCCTACAAGTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAATAGACAAGCAGAGCCTTGATCTATGCTAGACCCTACAAGTCAC  799

seq1  AGGCTGCATTTTAGGAAGAAAAATTCCATGTAACCCACATAGAAAAGACT  850
      | |||||||||||||||| |||||||||||||||||||||||||||||||
seq2  A-GCTGCATTTTAGGAAG-AAAATTCCATGTAACCCACATAGAAAAGACT  847

seq1  GGGCGGTCTGCTGGAGACCAGTGGTTCTCAACTTGGGATGTACAGCAGAA  900
      ||   ||||||| |||| ||||||||||| |||| ||||||||||||| |
seq2  GG--CGTCTGCT-GAGA-CAGTGGTTCTC-ACTT-GGATGTACAGCAG-A  890

seq1  TAGCAGGGATTCACAGTGTGCTCTGACCTGGGCCTTCCCCTTTCCATTTC  950
      |||||  ||||||||||||||||||| ||||  ||||||  || ||||||
seq2  TAGCA--GATTCACAGTGTGCTCTGA-CTGG--CTTCCC--TTTCATTTC  933

seq1  CTAAGACTTGGGTTTAATATGTCCATGAAAAAATTCAGCCATCAGTATTC  1000
         ||||||||   | |||||| ||||||||   ||||||||||||||||
seq2  --TAGACTTGG---TTATATGT-CATGAAAA---TCAGCCATCAGTATTC  974

seq1  CTAAAAGATTTCCAGCTGAT  1020
         |||||||  ||||||||
seq2  --TAAAGATT--CAGCTGAT  990

seq1: chr10_27017362_27018413
seq2: B6Ng01-035L22.g_69_1075 (reverse)

seq1  CCTAATGAATAAAGGAACCAATCACTGGGTGAGTAGGCAGGACTTCCAGG  50
      ||||||||||||||  ||| ||| ||||  | ||| ||| ||| ||||| 
seq2  CCTAATGAATAAAG--ACC-ATC-CTGG--GGGTA-GCA-GAC-TCCAG-  40

seq1  TTGGACAGGGGAAGACAGTAAGCAGGAAAATGATAGGAGCTATTGGAGGG  100
       ||||||  |||||||||| |||||  |||||  | |||||||  || ||
seq2  -TGGACA--GGAAGACAGT-AGCAG--AAATG--AAGAGCTAT--GA-GG  79

seq1  GATAGCAAGAGGATGTAGCTCCTAGTGTCTCCCAGTTTCTATGGCAAATC  150
      |||||| ||| ||||||||||||||| |||||||| |||||||   ||||
seq2  GATAGC-AGA-GATGTAGCTCCTAGTTTCTCCCAG-TTCTATG--CAATC  124

seq1  TGCCAGGATTTGCCACCAGAGGATTTAGAGTTAATGTGGCTCTTTACAAG  200
      || |||   ||||   |||| ||||||||||  |||| |||| |||||||
seq2  TG-CAG--ATTGC--ACAGA-GATTTAGAGT--ATGT-GCTC-TTACAAG  164

seq1  ATTAGGAGTCTAGTTGTTGTGCCCAGAGATTGAGTTACCATTGTTTCTGA  250
      | ||||||||||||   |||||||||||||||||||||||||||||||||
seq2  A-TAGGAGTCTAGT--GTGTGCCCAGAGATTGAGTTACCATTGTTTCTGA  211

seq1  AGTAAACAAAACAAAACAAAACGAACCAAAACACAATTTCATCTTGTCTC  300
      ||||||| |||||||   ||||||||||||||||||||||||| ||||||
seq2  AGTAAAC-AAACAAA--CAAACGAACCAAAACACAATTTCATC-TGTCTC  257

seq1  CAATTATAATATTTTCTATACCTAGGTCAGCATAATTCTATTTATTTTAC  350
      ||||||||||| |||||||||||||||||||||||||||||||| |||||
seq2  CAATTATAATA-TTTCTATACCTAGGTCAGCATAATTCTATTTA-TTTAC  305

seq1  CTCTGACTATATATGGCAATGTTATAATAACCACAATGTCTTCATTATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACTATATATGGCAATGTTATAATAACCACAATGTCTTCATTATAT  355

seq1  CAAGTTTCAGAAAGTGCTGGGTAGTATTAGGCATTTAATGAATGTTACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTCAGAAAGTGCTGGGTAGTATTAGGCATTTAATGAATGTTACTG  405

seq1  AAAAATATTTAAAAAATCATTATTTCAATTTAGGTCCTATTACTGTTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATTTAAAAAATCATTATTTCAATTTAGGTCCTATTACTGTTTTA  455

seq1  TATTGCAAAGATATTTTTATATTGCAAATATAGTTTTTTACAACCAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCAAAGATATTTTTATATTGCAAATATAGTTTTTTACAACCAAATA  505

seq1  TCTTTCCTGCTTTTCGTAAGAGGCTTTATAGTTTTCACAACTACACTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTGCTTTTCGTAAGAGGCTTTATAGTTTTCACAACTACACTTAA  555

seq1  TGGATACAAAGGTTTTTAAATTAAGATTTAGTCAATGTTACTAGATACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATACAAAGGTTTTTAAATTAAGATTTAGTCAATGTTACTAGATACAG  605

seq1  TAAGGCTGCTGAACAGCTGCTGTGTGTAAGGACATGAGAGTATCTAAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCTGCTGAACAGCTGCTGTGTGTAAGGACATGAGAGTATCTAAGGT  655

seq1  CATTATAAGGTCATCAAAACACTGTTCCTTAGGTTAAGCTGTGTTGAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATAAGGTCATCAAAACACTGTTCCTTAGGTTAAGCTGTGTTGAGTT  705

seq1  CAGAGAAGAAGCACTGAACTTTTTCACAATAGAGTAAGATAGTTCAGTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAGAAGCACTGAACTTTTTCACAATAGAGTAAGATAGTTCAGTTC  755

seq1  AAATATCATTTTATTACTACAAATAATCTTGTTTTTGATATATTAGGAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCATTTTATTACTACAAATAATCTTGTTTTTGATATATTAGGAGT  805

seq1  TAATTGGGATGCCATCTGCAGTAATGTGAATCTGCTCTTAATGTCTTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGGGATGCCATCTGCAGTAATGTGAATCTGCTCTTAATGTCTTCTG  855

seq1  AAATAATGGATTTGGGAACATTATGTGTATTAATCTAGTTCAAATTTCAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGGATTTGGGAACATTATGTGTATTAATCTAGTTCAAATTTCAG  905

seq1  GGCTTTAAGCTCTGATTTATTACTCTCATTTTCTGTTCTTGCATTAAAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTAAGCTCTGATTTATTACTCTCATTTTCTGTTCTTGCATTAAAAT  955

seq1  GACCGAACTCACGATGAAAGGTTGATGTTTTTCTGTATTTGAAAAAGAAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCGAACTCACGATGAAAGGTTGATGTTTTTCTGTATTTGAAAAAGAAT  1005

seq1  TC  1052
      ||
seq2  TC  1007