BAC Information

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BAC

Clone NameB6Ng01-035P19
Chromosome10 (Build37)7 (Build37)
Map Location 104,053,903 - 104,054,36318,761,951 - 18,762,768
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035P19.bB6Ng01-035P19.g
ACCDH864307DH864308
length879821
definitionDH864307|Mus musculus domesticus DNA, BAC clone: B6Ng01-035P19, 5' end.DH864308|Mus musculus domesticus DNA, BAC clone: B6Ng01-035P19, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,363)(18,761,951 - 18,762,768)
sequence
gaattctcacctgaggaataccgaatggcagtgaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaagattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctta
gaaaattggacatagtactactggagaatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaaattatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatatccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggaggtacagagacaaagtttggagctgagataa
aaagatggaccatgtagacactgccatattcggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcagattatgctgaaag
gaccctgatatagctgtctctgtcagagt
gaattctatcagtctgtctgtctgtctagttagctagctagctctgtcta
actatctctttctttttctttctttctttttaacatctatttatttggga
cagagtctcaccatgaagccctgagtgtcctggaaatttctatttagacc
accttggcttaaaattcacagaaatactcgtatttcaggcccagagtgcc
gggattaaaattacaagccatcattattctttagatagctgtctattaat
tatcaaaacagtgcctggagtgggggagcatagcaagaacaaggatgcca
tctctacccttgggtggcatccaagtatgtagccccagtagcacatccca
gatgtgcctgtcagcactgtgacctggagtcctgagattcccagaatcag
aagatcataaggttcacagtcctagacatgaagcttgactgctcaccttc
accactgcaaggtctgtgtacaagtgagggtcctacaataaagcaagggc
ttgagtgggaggtatcatggatagagtcttgctgtgcttgcatcctaaaa
tttcacttacaggtaatcatgtgctggtccatgtcatttccttctctcct
ctcctccccttctctcccctcccctcctctctctctctccttgcttctct
ctccctccctctcttcctttattatcccattactcttctctactccacct
ctcattctataggaaaatcacccaagtcacccatggccggatctgaccag
attctgattcatctagatgattcttgaccattgttgattttttattgttg
ctggttggtttgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-035P19.b_44_514 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          |||||||||||| |||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCATTGTGTAGATGTACCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || ||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| |||||||||||||||||||||||||| ||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCAGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      ||||||||||||||||||||||||||| |||||||||||||||| |||| 
seq2  TGGGGCATCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATTCTCCA  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||||| | |||||||||||| ||||||||||||
seq2  GTAGTACTATGTCCAATTTTCTAAGGAACCGCCAGACTGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATCTTTGATCTTAGCCA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  400

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCACTGCCATTCG  450

seq1  GTATTCCTCAGGTGAGAATTC  461
      |||||||||||||||||||||
seq2  GTATTCCTCAGGTGAGAATTC  471

seq1: chr7_18761951_18762768
seq2: B6Ng01-035P19.g_67_887

seq1  GAATTCTATCAGTCTGTCTGTCTGTCTAGTTAGCTAGCTAGCTCTGTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCAGTCTGTCTGTCTGTCTAGTTAGCTAGCTAGCTCTGTCTA  50

seq1  ACTATCTCTTTCTTTTTCTTTCTTTCTTTTTAACATCTATTTATTTGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCTCTTTCTTTTTCTTTCTTTCTTTTTAACATCTATTTATTTGGGA  100

seq1  CAGAGTCTCACCATGAAGCCCTGAGTGTCCTGGAAATTTCTATTTAGACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCTCACCATGAAGCCCTGAGTGTCCTGGAAATTTCTATTTAGACC  150

seq1  ACCTTGGCTTAAAATTCACAGAAATACTCGTATTTCAGGCCCAGAGTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGCTTAAAATTCACAGAAATACTCGTATTTCAGGCCCAGAGTGCC  200

seq1  GGGATTAAAATTACAAGCCATCATTATTCTTTAGATAGCTGTCTATTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTAAAATTACAAGCCATCATTATTCTTTAGATAGCTGTCTATTAAT  250

seq1  TATCAAAACAGTGCCTGGAGTGGGGGAGCATAGCAAGAACAAGGATGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAACAGTGCCTGGAGTGGGGGAGCATAGCAAGAACAAGGATGCCA  300

seq1  TCTCTACCCTTGGGTGGCATCCAAGTATGTAGCCCCAGTAGCACATCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACCCTTGGGTGGCATCCAAGTATGTAGCCCCAGTAGCACATCCCA  350

seq1  GATGTGCCTGTCAGCACTGTGACCTGGAGTCCTGAGATTCCCAGAATCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGCCTGTCAGCACTGTGACCTGGAGTCCTGAGATTCCCAGAATCAG  400

seq1  AAGATCATAAGGTTCACAGTCCTAGACATGAAGCTTGACTGCTCACCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCATAAGGTTCACAGTCCTAGACATGAAGCTTGACTGCTCACCTTC  450

seq1  ACCACTGCAAGGTCTGTGTACAAGTGAGGGTCCTACAATAAAGCAAGGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTGCAAGGTCTGTGTACAAGTGAGGGTCCTACAATAAAGCAAGGGC  500

seq1  TTGAGTGGGAGGTATCATGGATAGAGTCTTGCTGTGCTTGCATCCTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGGGAGGTATCATGGATAGAGTCTTGCTGTGCTTGCATCCTAAAA  550

seq1  TTTCACTTACAGGTAATCATGTGCTGGTCCATGTCATTTCCTTCTCTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTTACAGGTAATCATGTGCTGGTCCATGTCATTTCCTTCTCTCCT  600

seq1  CTCCTCCCCTTCTCTCCCCTCCCCTCCTCTCTCTCTCTCCTTGCTTCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCCTTCTCTCCCCTCCCCTCCTCTCTCTCTCTCCTTGCTTCTCT  650

seq1  CTCCCTCCCTCTCTTCCTTTATTATCCCATTACTCTTCTCTACTCCACCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCCCTCTCTTCCTTTATTATCCCATTACTCTTCTCTACTCCACCT  700

seq1  CTCATTCTATAGGAAAATCACCCAAGTCACCCATGGCCGGATCTGACCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCTATAGGAAAATCACCCAAGTCACCCATGGCCGGATCTGACCAG  750

seq1  A-TCTGATTCATCTAGATGATTCTTGACCATTGTTGA-TTTTTATTGTTG  798
      | ||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATTCTGATTCATCTAGATGATTCTTGACCATTGTTGATTTTTTATTGTTG  800

seq1  CTGGTT-GTTTGTGTGTGTGT  818
      |||||| ||||||||||||||
seq2  CTGGTTGGTTTGTGTGTGTGT  821