BAC Information

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BAC

Clone NameB6Ng01-036B10
Chromosome10 (Build37)
Map Location 41,472,594 - 41,620,607
singlet/doubletdoublet
Overlap gene2410017P07Rik, Sesn1
Upstream gene9030224M15Rik, Cdc40, Wasf1, Gpr6, A530089I17Rik, LOC633979, Zbtb24, Mical1, Smpd2, Ppil6, Cd164, 5033413D22Rik, EG629461
Downstream geneArmc2, 1700016J18Rik, LOC624784, Foxo3a, Lace1, LOC666540, Snx3, Nr2e1, c222389, Ostm1, Sec63, Scml4, EG666569
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036B10.bB6Ng01-036B10.g
ACCDH864377DH864378
length1,036368
definitionDH864377|Mus musculus domesticus DNA, BAC clone: B6Ng01-036B10, 5' end.DH864378|Mus musculus domesticus DNA, BAC clone: B6Ng01-036B10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,619,460 - 41,620,607)(41,472,594 - 41,472,967)
sequence
gaattcaatatgtaacactggttggctccaaatttgcaatcttccaagat
gggtatggtggtgcatgtcattaatctctggtctaaggaggcagaggcag
ttgggcttctatggttcaaggccagcctattctgcattctcaggctctac
tatcaagtgctgaggttacaaggatatccagcatgtttagcagcgattca
atattagaatggtcatagtgtgtatggaaactctcttgtttgttttttaa
accgttttcatttagaagtatacataggagatgcacctgaagaacaggat
acatcagttcactgtccactgacatcagtataaactgtataccttctttc
agcttactgtctggtagtattagtgtaaactatgtactttctaaaaaatg
caaatttaaatctggggatagggagctgatgaattagaaaaataaaaccc
ccaatgtttttacttttatccgttatttcttagtagaaaaccaccaagag
aatctagaaactttacattagcctcgtactaagaccagcgaaaggtaaga
agccaactaacactcagtatctcagcaacagacacacaatctcttggcca
cactgagaacttccaagcttggaagctgtcagaaacagtgatgtggtcca
tcctggacagtgatgttttcctcatgttaatctcactgactctaaattgc
aaacaacaaacactgaagctagcattcaaattcttcagggacatttaaga
ccttatcacaagaacttctgtttattaggaaacacgaaagaaccaagaga
ggcttgaaacttcctgaccatcagcatataaacatctgtcaacctgcaca
catcttgcccgtttctgtggtaacagtgtgcaccaggttcttttgcacac
atctggccggttctgtggtaacagtatgcacaggttctttgccacatctg
cccgtttctgtgtacagtgtgcacagttctttgccacatctgccgtttct
gggtaacagtggccagttcttgcacatctgcgtttc
tttgaagttcatgtttaaatcattctgggaatgtcgctcaatggtggagt
gcttcctaccatgtgaaagcccttgctctgacttcctacgtcacacacaa
aaaagactcttctgcaaaggtgatttatgctcattcccgataggtctctg
caatacccaaaccccattaaaacaaacttttaggtggagaccttgggggt
gggggtgggaggctgggcacaaattcagacacagcaagggctgtgatggg
aagttctcatgacaggtctatattggggattggttccaatgctttgaaat
aacctggtcttcaaattgggaatctgcatgtccaaatgctgaatgtcctt
gtcctcgtttggtttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_41619460_41620607
seq2: B6Ng01-036B10.b_46_1081 (reverse)

seq1  GAAACGGGCAGATGTGTGCAAAGAACCTGTGCACACTGTTACCACAGGAA  50
                                                        
seq2  --------------------------------------------------  0

seq1  ACGGGCAGATGTGTGCAAAGAACCTGTGCACACTGTTACCACAGGAAACG  100
                                                  ||||| 
seq2  --------------------------------------------GAAAC-  5

seq1  GGCAGATGTGTGCAAAGAACCTGTGCACACTGTTACCACAGGAAACGGGC  150
       |||||||||    ||||||   ||  |||||||||| || ||||| |||
seq2  -GCAGATGTG---CAAGAAC---TGGCCACTGTTACC-CA-GAAAC-GGC  45

seq1  AGATGTGTGCAAAGAACCTGTGCACACTGTTACCACAGGAAACGGGCAGA  200
      ||||||| |||||||| |||||||||||||   |||| ||||||||||||
seq2  AGATGTG-GCAAAGAA-CTGTGCACACTGT--ACACA-GAAACGGGCAGA  90

seq1  TGTGTGCAAAGAACCTGTGCATACTGTTACCACAGGAAACGGGCAGATGT  250
      |||| ||||||||||||||||||||||||||||| ||| ||| |||||||
seq2  TGTG-GCAAAGAACCTGTGCATACTGTTACCACA-GAACCGGCCAGATGT  138

seq1  GTGC-AAAGAACCT-GTGCACACTGTTACCACAGGAAACGGGC-AGATGT  297
      |||| ||||||||| |||||||||||||||||| ||||||||| ||||||
seq2  GTGCAAAAGAACCTGGTGCACACTGTTACCACA-GAAACGGGCAAGATGT  187

seq1  GTGCAGGTTGACAGATGGTTTATATGGCTGATGGTCAGGAAGTTTTCAAG  347
      |||||||||||||||| |||||||| |||||||||||||||| |||||||
seq2  GTGCAGGTTGACAGAT-GTTTATAT-GCTGATGGTCAGGAAG-TTTCAAG  234

seq1  CCTCTCTTGGTTCTTTCGTGTTTCCTATAAAACAGGAAGTTCTTGTGATA  397
      |||||||||||||||||||||||||||  ||||| |||||||||||||||
seq2  CCTCTCTTGGTTCTTTCGTGTTTCCTAATAAACA-GAAGTTCTTGTGATA  283

seq1  AGGTCTTAAATGTCCCTGAAGAATTTGAATGCTAGCTTCAGTGTTTGTTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTAAATGTCCCTGAAGAATTTGAATGCTAGCTTCAGTGTTTGTTG  333

seq1  TTTGCAATTTAGAGTCAGTGAGATTAACATGAGG-AAACATCACTGTCCA  496
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTTGCAATTTAGAGTCAGTGAGATTAACATGAGGAAAACATCACTGTCCA  383

seq1  GGATGGACCACATCACTG-TTCTGACAGCTTCCAAGCTTGGAAGTTCTCA  545
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGATGGACCACATCACTGTTTCTGACAGCTTCCAAGCTTGGAAGTTCTCA  433

seq1  GTGTGGCCAAGAGATTGTGTGTCTGTTGCTGAGATACTGAGTGTTAGTTG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGCCAAGAGATTGTGTGTCTGTTGCTGAGATACTGAGTGTTAGTTG  483

seq1  GCTTCTTACCTTTCGCTGGTCTTAGTACGAGGCTAATGTAAAGTTTCTAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTACCTTTCGCTGGTCTTAGTACGAGGCTAATGTAAAGTTTCTAG  533

seq1  ATTCTCTTGGTGGTTTTCTACTAAGAAATAACGGATAAAAGTAAAAACAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTTGGTGGTTTTCTACTAAGAAATAACGGATAAAAGTAAAAACAT  583

seq1  TGGGGGTTTTATTTTTCTAATTCATCAGCTCCCTATCCCCAGATTTAAAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGTTTTATTTTTCTAATTCATCAGCTCCCTATCCCCAGATTTAAAT  633

seq1  TTGCATTTTTTAGAAAGTACATAGTTTACACTAATACTACCAGACAGTAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTTTTTAGAAAGTACATAGTTTACACTAATACTACCAGACAGTAA  683

seq1  GCTGAAAGAAGGTATACAGTTTATACTGATGTCAGTGGACAGTGAACTGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAAGAAGGTATACAGTTTATACTGATGTCAGTGGACAGTGAACTGA  733

seq1  TGTATCCTGTTCTTCAGGTGCATCTCCTATGTATACTTCTAAATGAAAAC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCCTGTTCTTCAGGTGCATCTCCTATGTATACTTCTAAATGAAAAC  783

seq1  GGTTTAAAAAACAAACAAGAGAGTTTCCATACACACTATGACCATTCTAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAAAAAACAAACAAGAGAGTTTCCATACACACTATGACCATTCTAA  833

seq1  TATTGAATCGCTGCTAAACATGCTGGATATCCTTGTAACCTCAGCACTTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAATCGCTGCTAAACATGCTGGATATCCTTGTAACCTCAGCACTTG  883

seq1  ATAGTAGAGCCTGAGAATGCAGAATAGGCTGGCCTTGAACCATAGAAGCC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAGAGCCTGAGAATGCAGAATAGGCTGGCCTTGAACCATAGAAGCC  933

seq1  CAACTGCCTCTGCCTCCTTAGACCAGAGATTAATGACATGCACCACCATA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGCCTCTGCCTCCTTAGACCAGAGATTAATGACATGCACCACCATA  983

seq1  CCCATCTTGGAAGATTGCAAATTTGGAGCCAACCAGTGTTACATATTGAA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCTTGGAAGATTGCAAATTTGGAGCCAACCAGTGTTACATATTGAA  1033

seq1  TTC  1148
      |||
seq2  TTC  1036

seq1: chr10_41472594_41472967
seq2: B6Ng01-036B10.g_67_440

seq1  GAATTCTTTGAAGTTCATGTTTAAATCATTCTGGGAATGTCGCTCAATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAAGTTCATGTTTAAATCATTCTGGGAATGTCGCTCAATGG  50

seq1  TGGAGTGCTTCCTACCATGTGAAAGCCCTTGCTCTGACTTCCTACGTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTGCTTCCTACCATGTGAAAGCCCTTGCTCTGACTTCCTACGTCAC  100

seq1  ACACAAAAAAGACTCTTCTGCAAAGGTGATTTATGCTCATTCCCGATAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAAAAGACTCTTCTGCAAAGGTGATTTATGCTCATTCCCGATAGG  150

seq1  TCTCTGCAATACCCAAACCCCATTAAAACAAACTTTTAGGTGGAGACCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCAATACCCAAACCCCATTAAAACAAACTTTTAGGTGGAGACCTT  200

seq1  GGGGGTGGGGGTGGGAGGCTGGGCACAAATTCAGACACAGCAAGGGCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTGGGGGTGGGAGGCTGGGCACAAATTCAGACACAGCAAGGGCTGT  250

seq1  GATGGGAAGTTCTCAGGACAGGTCTATATTGGGGATTGGTTCCAATGCTT  300
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GATGGGAAGTTCTCATGACAGGTCTATATTGGGGATTGGTTCCAATGCTT  300

seq1  TGAAATAACCTGGTCCTCAAATTGGGAATCTGCATGTCCAAATGCTGAAG  350
      ||||||||||||||| ||||||||||||||||||||||||||||||||| 
seq2  TGAAATAACCTGGTCTTCAAATTGGGAATCTGCATGTCCAAATGCTGAAT  350

seq1  GTCCTTGTCCCCGATTGGTTTTTG  374
      |||||||||| || ||||||||||
seq2  GTCCTTGTCCTCGTTTGGTTTTTG  374