BAC Information

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BAC

Clone NameB6Ng01-036F21
Chromosome10 (Build37)
Map Location 59,336,905 - 59,494,375
singlet/doubletdoublet
Overlap geneDnajb12, Ddit4, D10Ertd641e, Ascc1
Upstream geneSh3md4, Sept10, Ankrd57, LOC664892, P4ha1, LOC100039174, Pla2g12b, Oit3, Ccdc109a, LOC100039225, Cbara1, EG664907, LOC664936
Downstream geneSpock2, Chst3, LOC100039080, Psap, Cdh23, 4632428N05Rik, Slc29a3, Unc5b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036F21.bB6Ng01-036F21.g
ACCDH864563DH864564
length2881,009
definitionDH864563|Mus musculus domesticus DNA, BAC clone: B6Ng01-036F21, 5' end.DH864564|Mus musculus domesticus DNA, BAC clone: B6Ng01-036F21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,336,905 - 59,337,192)(59,493,356 - 59,494,375)
sequence
ttccagccctgcacagaatggtcgactccagcatctgagccacctctgga
gtttgcagtcccatgtcattctcttcctctcactcacctggggcccctgt
agtcagcctctaatcttcttcatggtgcatctcggaagctctggcttccg
acaactgaaatgacaaattagatttgtcacttcacagaagtgatgcttcc
cgccgagacctacagaacgagtgacaattggacagacaggaaaggtaact
gaggatgttcaggtaggcgtgggggtggggaggagagt
gaattcctgtgcccgtgaggacacagagagaagtcatctgtcatccaaca
agaagtctcgataggctccaccctgctagcacccgaatcttccttcatct
tccagactctagaactggaagaaaacaaagttctcagtctactgtaatct
gtgaccctgtgaccctgaactaaacagagtaatgagcccaatgacccaat
ttctagatgtggacactgaagatgtatttctaatgatataaaatactgtc
tatgagtttaggcaatgcagcactactgcaaaatacctaagtgtccagtt
gaaaactacatatgtacgtgtataagcgacaaggggtgagtttccagaat
gtgttattaagtaagtaaaaagtgaaacaacaaagacttcatatgctttg
ctaccatttgtgcaaggctgaaaagaacagacaatcatctacagaaaggt
gctagggatttaactaagttagtaaagtcctacctggcacacacaaaacc
ctgggtctgaaccctaacaccacatgaatcaggaacaagtgggtggtttc
atgtccataatcctagtgctcacaggtagaggcaagagggatcggggttc
aaggccatcctcgactcctttagtttaagtttcaaggccagtctcaaaac
aacaacaacatacgctatgcagattcgggctgaagtcacgaagaccgacc
ttttcctgcctcccaagtgcttgagtacaggtatgtaccaccacactgta
tgaccctttatatagtctttgatttttgggaagtatgttgatggcataca
tttaaaacataaataacaaggattttaaaggatgggggaaaactaaggca
gagatgatcacaggaaggattgcaccactgagctgtagcctggcgtctac
acagtgggatcaggcagccagggctcatgggagactgtctcaaacaatca
atgtgcacactttcttggtcttttcttattcttataacactagttcacta
ttctcagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_59336905_59337192
seq2: B6Ng01-036F21.b_50_337

seq1  TTCCAGCCCTGCACAGAATGGTCGACTCCAGCATCTGAGCCACCTCTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCCCTGCACAGAATGGTCGACTCCAGCATCTGAGCCACCTCTGGA  50

seq1  GTTTGCAGTCCCATGTCATTCTCTTCCTCTCACTCACCTGGGGCCCCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCAGTCCCATGTCATTCTCTTCCTCTCACTCACCTGGGGCCCCTGT  100

seq1  AGTCAGCCTCTAATCTTCTTCATGGTGCATCTCGGAAGCTCTGGCTTCCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCCTCTAATCTTCTTCATGGTGCATCTCGGAAGCTCTGGCTTCCG  150

seq1  ACAACTGAAATGACAAATTAGATTTGTCACTTCACAGAAGTGATGCTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGAAATGACAAATTAGATTTGTCACTTCACAGAAGTGATGCTTCC  200

seq1  CGCCGAGACCTACAGAACGAGTGACAATTGGACAGACAGGAAAGGTAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCGAGACCTACAGAACGAGTGACAATTGGACAGACAGGAAAGGTAACT  250

seq1  GAGGATGTTCAGGTAGGCGTGGGGGTGGGGAGGAGAGT  288
      ||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGTTCAGGTAGGCGTGGGGGTGGGGAGGAGAGT  288

seq1: chr10_59493356_59494375
seq2: B6Ng01-036F21.g_66_1074 (reverse)

seq1  AACTGGAGAATAGTGGAACTAGTTGTCTAATAAGAGATAAGAAAAAGACA  50
      |||| ||||||||| ||||||   || | |||||| ||||| ||||||| 
seq2  AACT-GAGAATAGT-GAACTA---GTGTTATAAGA-ATAAG-AAAAGACC  43

seq1  AAAGAAAAGTGTGCACATGATTTGTTTTGAGACAGGTCTCCCCATGAGCC  100
      ||   |||||||||||||   ||| ||||||||| |||| ||||||||||
seq2  AA--GAAAGTGTGCACATTGATTG-TTTGAGACA-GTCT-CCCATGAGCC  88

seq1  CTGGCTGGCCTGGATCCCACTGTGTAGACGGCCAGGGCTACAGCTCAGTG  150
      |||||| |||| ||||||||||||||||| |||| |||||||||||||||
seq2  CTGGCT-GCCT-GATCCCACTGTGTAGAC-GCCA-GGCTACAGCTCAGTG  134

seq1  GTGCAATCTATCCCTGTGGTTCATCTCTGGCCTTAGTTTT-CCCCATCCT  199
      ||||||||  | ||||| | |||||||| ||||||||||| |||||||||
seq2  GTGCAATC-CTTCCTGT-GATCATCTCT-GCCTTAGTTTTCCCCCATCCT  181

seq1  TTTAAATCCTTGTTAATTTATGTTTTAAATGTATGCCATCAACATACTT-  248
      || ||||||||||| |||||||||||||||||||||||||||||||||| 
seq2  TTAAAATCCTTGTT-ATTTATGTTTTAAATGTATGCCATCAACATACTTC  230

seq1  CCAAAAATC-AAGACTATATAAAGGGTCATAACAGTGTGGTGGTACATAC  297
      ||||||||| |||||||||||||||||||| |||||||||||||||||||
seq2  CCAAAAATCAAAGACTATATAAAGGGTCAT-ACAGTGTGGTGGTACATAC  279

seq1  CTGTACTCAAGCACTTGGGAGGCAGGAAAAGGTCGGTCTTCGTGACTTCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTCAAGCACTTGGGAGGCAGGAAAAGGTCGGTCTTCGTGACTTCA  329

seq1  GCCCG-ATCTGCATAGCGTATGTTGTTGTTG-TTTGAGACTGGCCTTG-A  394
      ||||| ||||||||||||||||||||||||| |||||||||||||||| |
seq2  GCCCGAATCTGCATAGCGTATGTTGTTGTTGTTTTGAGACTGGCCTTGAA  379

seq1  ACTT-AACT-AAGGAGTCGAGGATGGCCTTGAACCCCGAT-CCTCTTGCC  441
      |||| |||| |||||||||||||||||||||||||||||| |||||||||
seq2  ACTTAAACTAAAGGAGTCGAGGATGGCCTTGAACCCCGATCCCTCTTGCC  429

seq1  TCTACCTGTGAGCACTAGGATTATGGACATG-AACCACCCACTTGTTCCT  490
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCTACCTGTGAGCACTAGGATTATGGACATGAAACCACCCACTTGTTCCT  479

seq1  GATTCATGTGGTGTTAGGGTTCAGACCCAGGGTTTTGTGTGTGCCAGGTA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATGTGGTGTTAGGGTTCAGACCCAGGGTTTTGTGTGTGCCAGGTA  529

seq1  GGACTTTACTAACTTAGTTAAATCCCTAGCACCTTTCTGTAGATGATTGT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTTACTAACTTAGTTAAATCCCTAGCACCTTTCTGTAGATGATTGT  579

seq1  CTGTTCTTTTCAGCCTTGCACAAATGGTAGCAAAGCATATGAAGTCTTTG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTTTTCAGCCTTGCACAAATGGTAGCAAAGCATATGAAGTCTTTG  629

seq1  TTGTTTCACTTTTTACTTACTTAATAACACATTCTGGAAACTCACCCCTT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCACTTTTTACTTACTTAATAACACATTCTGGAAACTCACCCCTT  679

seq1  GTCGCTTATACACGTACATATGTAGTTTTCAACTGGACACTTAGGTATTT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGCTTATACACGTACATATGTAGTTTTCAACTGGACACTTAGGTATTT  729

seq1  TGCAGTAGTGCTGCATTGCCTAAACTCATAGACAGTATTTTATATCATTA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTAGTGCTGCATTGCCTAAACTCATAGACAGTATTTTATATCATTA  779

seq1  GAAATACATCTTCAGTGTCCACATCTAGAAATTGGGTCATTGGGCTCATT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATACATCTTCAGTGTCCACATCTAGAAATTGGGTCATTGGGCTCATT  829

seq1  ACTCTGTTTAGTTCAGGGTCACAGGGTCACAGATTACAGTAGACTGAGAA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTTTAGTTCAGGGTCACAGGGTCACAGATTACAGTAGACTGAGAA  879

seq1  CTTTGTTTTCTTCCAGTTCTAGAGTCTGGAAGATGAAGGAAGATTCGGGT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTTTCTTCCAGTTCTAGAGTCTGGAAGATGAAGGAAGATTCGGGT  929

seq1  GCTAGCAGGGTGGAGCCTATCGAGACTTCTTGTTGGATGACAGATGACTT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCAGGGTGGAGCCTATCGAGACTTCTTGTTGGATGACAGATGACTT  979

seq1  CTCTCTGTGTCCTCACGGGCACAGGAATTC  1020
      ||||||||||||||||||||||||||||||
seq2  CTCTCTGTGTCCTCACGGGCACAGGAATTC  1009