BAC Information

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BAC

Clone NameB6Ng01-036M08
Chromosome10 (Build37)
Map Location 104,053,911 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036M08.bB6Ng01-036M08.g
ACCDH864838DH864839
length985571
definitionDH864838|Mus musculus domesticus DNA, BAC clone: B6Ng01-036M08, 5' end.DH864839|Mus musculus domesticus DNA, BAC clone: B6Ng01-036M08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgacttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctattagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgctagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttttcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagttttttattacaattt
gctctgtagtaaagctttaggtctggcatggtgatttcgccagaagttct
ttttatccttgagaagactttttgctatcctaggttttttgttaatccag
acaaatttgcaaattgctccttccaattcgttgaagaattgagttgggat
ttgatgggattgcatgatctgtaattgcttttggcaagataccattttta
caagtgatcctgcaatccatgagcatggagatcttcacttctgaaacttc
ttaatttcttcttcagatttgaagtttaatcatcagatcttcacgtcctt
agttgagtcacggcagaaatgtaatttactggagaatgagaagggtggat
gtgccgagttgattccagctggttaaactttggta

gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaatgt
tcaggttccttaatcatcagagaaatgcaaatcaaaacaaccctgagatt
ccacctgacaccagtcagaatggctaagatcaaaaattcaggtggcagca
gatgctggcgaggatgtggagagagaggaacactcctccattgttggtgg
aattgcaagcttgtacaaccactctggaaatcagtctgttggttcctcag
aaagttggacatagtactactggaggatccagcaatacctctcctgggca
tatatccagaagatgttccaaccgataagaaggacacatgttcactatgt
tcatagcagccttatttataatagccagaagctggaaagaacccagatgt
ccctcaacagaggaatggatacagaaaatgtgatacatttacacaatgga
gtactacttagctactaaaaagaatggatttacgaaattcctaggcaaat
ggatggaccttgatggcatcatcctgagtgaggtaacccaatcacaaaaa
aactcacagggatatgtactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053911_104054363
seq2: B6Ng01-036M08.g_65_515 (reverse)

seq1  CTCCATTGTGTAAATGTACCACATTTTCTGTATCTATTCCTCTGTTGAGG  50
      |||||||||||||||||| ||||||||||||||| |||||||||||||||
seq2  CTCCATTGTGTAAATGTATCACATTTTCTGTATCCATTCCTCTGTTGAGG  50

seq1  GGCATCTGGGTTCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCTATG  100
      | |||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GACATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATG  100

seq1  AATATAGTGGAGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCTGGATA  150
      || ||||| || ||||||||||||||| |||||||  |||||||||||||
seq2  AACATAGT-GAACATGTGTCCTTCTTATCGGTTGGAACATCTTCTGGATA  149

seq1  TATGCCCAGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATT  200
      ||||||||| ||||||||||||||||||||| |||||||||||||||| |
seq2  TATGCCCAGGAGAGGTATTGCTGGATCCTCCAGTAGTACTATGTCCAACT  199

seq1  TTCTGACGAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAA  250
      |||||| |||||  ||||| |||||||||||||||||||||||| |||||
seq2  TTCTGAGGAACCAACAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAA  249

seq1  TCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCA  300
      | ||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTCCACCAACAATGGAGGAGTGTTCCTCTCTCTCCACATCCTCGCCAGCA  299

seq1  TCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGT  350
      ||||||| ||||||||||||||||||||||||||||||||||||| ||||
seq2  TCTGCTGCCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTCAGGT  349

seq1  GGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTT  400
      ||||||||||||||||||||||||||||||| ||||||||||||||   |
seq2  GGAATCTCAGGGTTGTTTTGATTTGCATTTCTCTGATGATTAAGGAACCT  399

seq1  GAACATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAA  450
      ||||| ||||||||||||||||| |||||| |||||||||||||||||||
seq2  GAACA-TTTTTCAGGTGCTTCTCAGCCATTTGGTATTCCTCAGGTGAGAA  448

seq1  TTC  453
      |||
seq2  TTC  451


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