BAC Information

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BAC

Clone NameB6Ng01-036O21
Chromosome10 (Build37)
Map Location 104,054,681 - 104,055,291
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036O21.bB6Ng01-036O21.g
ACCDH864954DH864955
length837878
definitionDH864954|Mus musculus domesticus DNA, BAC clone: B6Ng01-036O21, 5' end.DH864955|Mus musculus domesticus DNA, BAC clone: B6Ng01-036O21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcccaccttatagcttacactccatcactgagggaagtcatgg
taggaactcaaggtatgactggagcagaagccatggaagaatgctgccta
taggcttgctcttcatggcttgttcagtttgctttccaacaccaaccaga
accatctgtctagagctgatgccactcacagtggacaggattctctcata
tcaatcattaatcaaggtaatcttcctagatctgtctagtttagcctaga
gttgacctaaccaaccagtataataccctgtaagagctgtcgatatgtgc
aacatataagtctgtccactggagcatgagactcctagctgacacatctc
aaaaaaaaataattttctctcccctagcattccctcacctgccaatatct
ccttagtaagatgtggggcccagaagtacctccctaatctttgccaaaat
tttgtctgccttgatattgtgtaggtattatgtaggtaaacataggtgct
gtgtattcgtcaatatgattggccatgtcatccagagaacagcatttgac
atcccctctttcccatcccttttaccttcactttctgaagtgtttttctg
aaacttgaggatgatagttgatactgcagatatctgctttaggactgtac
acattctaatcattatacatgtctgccttgactgctattcagtgcaaaac
gaaagcttctctgattaatgtaaaaacacagatctatgggtattaaatac
aaatactgggaagacaattttacaacacttccatttataagataaaatag
aagttatgttctattgacccagcccttagccttgggt

gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtatctcggcgtgactctaacgaaggaagtgaaagatctgtat
gataaaaacttcaagtccctgaagaaagaaattaaagaagatctcagaag
atggaaagatctcccatgctcatggattggcaggaccaacattgtaaaaa
tggctatcttgccaaaagcaatctacagattcaatgcaatccccattaaa
attccaactcaattcttcaacgaattagaaggagcaatttgcaaattcat
ctggaataacaaaaaaccgaggatagcaaaaactcttctcaaggataaaa
gaacctctggtggaatcaccatgcctgacctaaagctttactacagagca
attgtgataaaaactgcatggtactggtatagagacagacaagtggacca
atggaatagaattgaagacccagaaatgaacccacacacctatggtcact
tgatcttcgacaagggagccaaaaccatccagtggaagaaagacagcatt
ttcaacaattggtgctggcacaactggttgttatcatgtagaagaatgcg
aatcgatccatatttatctccttgtactaaggtcaaatctaagtggatca
aggaacttcacataaaaccagagacactgaaacttatagaggagaaagtg
ggggaaaagccttgaagatatgggcacaggggaaaaattcctgaacagaa
cagcaatggcttgtgctgtaagatcgagaattgacaaatgggacctaatg
aaactccaaagtttctgcaaggcaaaagacactgtctataagacaaaaag
aacaccaacagactgggaaaggatcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104054681_104055291
seq2: B6Ng01-036O21.g_130_739 (reverse)

seq1  TCTCTGGTTTTATGTGGAGTTCCTTAATCCACTTAGATTTTACCTTAGTA  50
      |||||||||||||||| |||||||| |||||||||||||| |||||||||
seq2  TCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAGATTTGACCTTAGTA  50

seq1  CAAGGAGATAGTAATTGATCAATTCACAATCTTCTACATGATAACAGCCA  100
      ||||||||||   || |||| |||| || ||||||||||||||||| |||
seq2  CAAGGAGATAAATATGGATCGATTCGCATTCTTCTACATGATAACAACCA  100

seq1  GTTGTGCCAGCATGATTTGTTGAAAATGCTGTCTTTTTTTCCACTGGATA  150
      ||||||||||||  | ||||||||||||||||| ||| ||||||||||| 
seq2  GTTGTGCCAGCACCAATTGTTGAAAATGCTGTC-TTTCTTCCACTGGATG  149

seq1  GTTTTAGCTCCCTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTCAT  200
      ||||| ||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTTTTGGCTCCCTTGTCGAAGATCAAGTGACCATAGGTGTGTGGGTTCAT  199

seq1  CTCTGGATCTTCAATTCTGTTCCATTGGTCTACTTGTCTGTCGCTATACA  250
       ||||| ||||||||||| ||||||||||| ||||||||||| |||||| 
seq2  TTCTGGGTCTTCAATTCTATTCCATTGGTCCACTTGTCTGTCTCTATACC  249

seq1  AGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTACAGTTTTAGGTCC  300
      ||||||||||||||||||||||||||||||||||||| || |||||||| 
seq2  AGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTAAAGCTTTAGGTCA  299

seq1  GGGATGGTGATTCCACCAGAGGTTCTTTTATCCTTGAGAAGAGTTTTTGC  350
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGTGATTCCACCAGAGGTTCTTTTATCCTTGAGAAGAGTTTTTGC  349

seq1  TATCCTAGGTTTTTTGTTATTCCAGATGAATCTGCCGATTGCCCTTTATA  400
      |||||| |||||||||||||||||||||||| |||  ||||| | || ||
seq2  TATCCTCGGTTTTTTGTTATTCCAGATGAATTTGCAAATTGCTCCTTCTA  399

seq1  ATTCTTTGAAGAATTGAGTTGGAATTTTGATGGGGATTGCATTGAATCTG  450
      |||| ||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATTCGTTGAAGAATTGAGTTGGAATTTTAATGGGGATTGCATTGAATCTG  449

seq1  TAGATTGCTTTTGGCAAGATAGCCATTTTTACTATATTGATCCTGCCGAT  500
      |||||||||||||||||||||||||||||||| || ||| ||||||| ||
seq2  TAGATTGCTTTTGGCAAGATAGCCATTTTTACAATGTTGGTCCTGCCAAT  499

seq1  CCATGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTAATTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTAATTTCTT  549

seq1  TCTTCAGAGACATGAAGTTCTTGTCATACAGATCTTTCACTTCCTTAGTT  600
      ||||||| ||| ||||||| || ||||||||||||||||||||||| |||
seq2  TCTTCAGGGACTTGAAGTTTTTATCATACAGATCTTTCACTTCCTTCGTT  599

seq1  AGAGTCACGCC  611
      |||||||||||
seq2  AGAGTCACGCC  610


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