BAC Information

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BAC

Clone NameB6Ng01-036P11
Chromosome10 (Build37)
Map Location 104,053,903 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036P11.bB6Ng01-036P11.g
ACCDH864980DH864981
length861658
definitionDH864980|Mus musculus domesticus DNA, BAC clone: B6Ng01-036P11, 5' end.DH864981|Mus musculus domesticus DNA, BAC clone: B6Ng01-036P11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcagacctttaaaaaagacctgtttctgttttattccacaaa
acagaaacaaaatttacactactcagttctttctatgaagccacaattac
gcttataccctaaccacacaaagaccaaacaaagaaagataacttcagag
taagcttttttatgaacagtgatacaaaaatactcaataaaaccttgccc
accaaatccaagaacacatcaaaaggatcattcaccaagatcaagtaggc
ttttttccagagatgcagggatatttcaatatatggaaattcatcaatgt
aatccactacgttgactaatactccaatgtgtaaatgtatcacattttct
gtatccattcctctgctgagggacttctgggttgtattcagcatctggca
attataaacaaggctgctatgaatatagttgaccatgtgtcctaataaca
ggttggagcaacttctgggtatatacccaggtttggtatagctgggtcct
tattatgccccattttctgaggaaccaccagactgatttccagagcagtt
gtaacagtttgcaatcccaccagtaatgaaggagagttcctctttctcca
catgcttgccagtatctgctgtcaccagagttttgtttttttgtttgttt
gtttgtttgtttttttgtttttttatcttagccattctgcctggtacgag
atggaaacatagggtttttttttttttaatttgcatttctctgatgacta
aagatgttgaacatttctttagtgcttcttggccattcgggtttcctcag
ttgagaattctctgtttagctctgtttcccattttttgatagggttattg
gttttctgaag
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacgtccttaatcatcaggcaaatgcaaatcaaaacaatcctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgagtatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcattctggcggttcctta
gaaaattggacatagaactaccggaggatccagcaatacctctcctggac
atatatccagaagatgtcccaaccggtaagaaggacacatgctccaccat
gttcatagcagccttatttataatagccagaagctggaaagaatccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaacg
gagtactactcagctattaaaaagaatgaatttatgaaattcgtaggcaa
atggatgggcctggagggcatcatcctgcgtgaggtaacacaatcacaaa
ggaactcacacaatatatactcactgataagtggatattagcccaaaact
taggatacccaagataagatacaatttgctaagcgcatgaaactcaagaa
agaatgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-036P11.g_67_537 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          |||| |||||||||||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCGTTGTGTAAATGTACCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || |||||||||||||||||||||||| |||||||||||| |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGATTCTTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| || ||||||||||||||||||||||||||
seq2  ATAAATAAGGCTGCTATGAACATGGTGGAGCATGTGTCCTTCTTACCGGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||| ||||||||||||||||| |||| ||||||||||||||||||||||
seq2  TGGGACATCTTCTGGATATATGTCCAGGAGAGGTATTGCTGGATCCTCCG  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      ||||| |||||||||||||||| | |||||||||||  ||||||||||||
seq2  GTAGTTCTATGTCCAATTTTCTAAGGAACCGCCAGAATGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATACTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      ||||||||||||||||||||||||||||| |||||||||||||||||| |
seq2  TTCTGACTGGTGTGAGGTGGAATCTCAGGATTGTTTTGATTTGCATTTGC  400

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTGATGATTAAGGACGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  450

seq1  GTATTCCTCAGGTGAGAATTC  461
      |||||||||||||||||||||
seq2  GTATTCCTCAGGTGAGAATTC  471