BAC Information

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BAC

Clone NameB6Ng01-037K08
Chromosome10 (Build37)9 (Build37)
Map Location 91,371,531 - 91,372,03315,564,594 - 15,564,698
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAnks1b, Apaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
Downstream geneLOC100041799, LOC667203, LOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037K08.bB6Ng01-037K08.g
ACCDH865442DH865443
length334105
definitionDH865442|Mus musculus domesticus DNA, BAC clone: B6Ng01-037K08, 5' end.DH865443|Mus musculus domesticus DNA, BAC clone: B6Ng01-037K08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(91,371,531 - 91,372,033)(15,564,594 - 15,564,698)
sequence
cccactttccacataactccaccccactgattctgtcagtgtttccaagg
catcccataacacttaggaattaatcaactgtcccagtgaatgtgttcaa
ccctgccagccttactatatgcaaatgactagtaaaacaaataatgaaag
gagctgatggggtctgtagccccgtggagggagcaacagtgtcatcaagc
caaaccccagagctcccagggactggaccaccaaccaaagaatacacatg
gagagacccatggcactggctgcatatgtggcagaggatggccttgttgg
acatcagtgggaggaacggcccttgagcctgagg
ctacaaaatgtataattcctacatctggaggatccattacttctcttact
atatctacgcctgtctgcacatgattgtatttatgagtgtgtgtgggggg
gggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91371531_91372033
seq2: B6Ng01-037K08.b_256_382 (reverse)

seq1  CCTCAGGCTCAAGGGCAAGAGAATCAAGCACAGATGGAGACAAAACTTTT  50
                                                        
seq2  --------------------------------------------------  0

seq1  CTTCCTATTGGTCCACTTATCCCAGGTATTTGGTTATCTATGAATCTGAC  100
                                                        
seq2  --------------------------------------------------  0

seq1  TACTTTATTCTTTTTTTTTTTTCATGCTCATCTCTCCAGATTTCATTTCT  150
                                                        
seq2  --------------------------------------------------  0

seq1  GCCTCATCCCATATATCTGTGTACCATGCAGTCGTTTGTCTGCCTAGTCT  200
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTTTTCCCCAATTTTTTAAACTGGATATTTTCTTTATTCATATTTTAA  250
                                                        
seq2  --------------------------------------------------  0

seq1  ATGTTTTCCCCTTTCCAGGTCTCTCCTTCGGAGCCCCCCCTCTCCCTGCA  300
                                                        
seq2  --------------------------------------------------  0

seq1  TCTATGAGGGTGCTCCCCCACCCACTCACTCCTGTCTTCCCTCCCTGGCA  350
                                                        
seq2  --------------------------------------------------  0

seq1  TTCTCCTACACTGGGGCATCGAACACCCTCAGACCCAAGGGCCTCTTCTC  400
                                |||||| | ||||||||  | |||
seq2  --------------------------CCTCAGGCTCAAGGGCCGTTCCTC  24

seq1  CCACTGATGTCCAACAAGGCCATCCTCTGCCACATATGCGGCCAATGCCA  450
      ||||||||||||||||||||||||||||||||||||||| |||| |||||
seq2  CCACTGATGTCCAACAAGGCCATCCTCTGCCACATATGCAGCCAGTGCCA  74

seq1  TGGGTCCCTCCATGTGTATTCTTTGGTTGGTGGTCTAGTCCCCAGGAGCT  500
      |||||| |||||||||||||||||||||||||||| ||||||  ||||||
seq2  TGGGTCTCTCCATGTGTATTCTTTGGTTGGTGGTCCAGTCCCTGGGAGCT  124

seq1  CTG  503
      |||
seq2  CTG  127

seq1: chr9_15564594_15564698
seq2: B6Ng01-037K08.g_77_181

seq1  CTACAAAATGTATAATTCCTACATCTGGAGGATCCATTACTTCTCTTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAAATGTATAATTCCTACATCTGGAGGATCCATTACTTCTCTTACT  50

seq1  ATATCTACGCCTGTCTGCACATGATTGTATTTATGAGTGTGTGTGGGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTACGCCTGTCTGCACATGATTGTATTTATGAGTGTGTGTGGGGGG  100

seq1  GGGTA  105
      |||||
seq2  GGGTA  105